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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:mitochondrion
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI

Inferred distinct locusB in Crop

locusBlocations
EER89811
EER90047
EER90546
EER91363
EER91417
EER92117
EER93094
EER93095
EER93976
EER95554
EER99265
EES01786
EES03767 endoplasmic reticulum
EES03803 endoplasmic reticulum
EES05839
EES12559
EES14570
EES15681
EES18431 endoplasmic reticulum
EES19841
KXG23118
KXG28720
KXG31128
KXG31516
KXG33320
KXG34930
OQU84758
OQU88871
OQU90653
OQU92056

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G40890.1 EER95554 AT1G20330.1 23175744
AT2G40890.1 EER90047 AT1G51570.1 23175744
AT2G40890.1 EER89811 AT1G64090.2 23175744
AT2G40890.1 EES19841 AT1G64090.2 23175744
AT2G40890.1 KXG31516 AT1G64090.2 23175744
AT2G40890.1 KXG33320 AT1G64090.2 23175744
AT2G40890.1 OQU84758 AT1G64090.2 23175744
AT2G40890.1 EER92117 AT2G03510.1 23175744
AT2G40890.1 EER99265 AT2G20990.3 23175744
AT2G40890.1 OQU92056 AT2G20990.3 23175744
AT2G40890.1 EES03803 AT2G30490.1 23175744
AT2G40890.1 EES03803 AT2G30490.1 23175744
AT2G40890.1 EES03767 AT2G40890.1 23175744
AT2G40890.1 EES18431 AT2G40890.1 23175744
AT2G40890.1 EES12559 AT2G45140.1 23175744
AT2G40890.1 EES14570 AT2G45140.1 23175744
AT2G40890.1 KXG31128 AT2G45140.1 23175744
AT2G40890.1 EER89811 AT2G46170.1 23175744
AT2G40890.1 EES19841 AT2G46170.1 23175744
AT2G40890.1 KXG31516 AT2G46170.1 23175744
AT2G40890.1 KXG33320 AT2G46170.1 23175744
AT2G40890.1 OQU84758 AT2G46170.1 23175744
AT2G40890.1 EER90546 AT3G26830.1 23175744
AT2G40890.1 EER93094 AT3G26830.1 23175744
AT2G40890.1 EER93095 AT3G26830.1 23175744
AT2G40890.1 KXG23118 AT3G26830.1 23175744
AT2G40890.1 KXG28720 AT3G26830.1 23175744
AT2G40890.1 KXG34930 AT3G26830.1 23175744
AT2G40890.1 OQU88871 AT3G26830.1 23175744
AT2G40890.1 OQU90653 AT3G26830.1 23175744
AT2G40890.1 EER93976 AT3G48890.1 23175744
AT2G40890.1 EES01786 AT5G22460.1 23175744
AT2G40890.1 EES15681 AT5G22460.1 23175744
AT2G40890.1 EER89811 AT5G41600.1 23175744
AT2G40890.1 EES19841 AT5G41600.1 23175744
AT2G40890.1 KXG31516 AT5G41600.1 23175744
AT2G40890.1 KXG33320 AT5G41600.1 23175744
AT2G40890.1 OQU84758 AT5G41600.1 23175744
AT2G40890.1 EER91417 AT5G52240.1 23175744
AT2G40890.1 EES05839 AT5G52240.1 23175744
AT2G40890.1 EER91363 AT5G53560.1 23175744
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d043174_P001 Maize mitochondrion 94.54 94.54
TraesCS3B01G361900.1 Wheat endoplasmic reticulum 80.51 81.14
TraesCS3A01G331800.1 Wheat endoplasmic reticulum 80.12 80.75
HORVU3Hr1G078660.1 Barley endoplasmic reticulum, extracellular 79.73 80.35
TraesCS3D01G325300.1 Wheat endoplasmic reticulum 79.34 79.96
EES18431 Sorghum endoplasmic reticulum 79.14 79.3
Os10t0196100-00 Rice mitochondrion 36.45 77.92
PGSC0003DMT400008504 Potato cytosol 29.82 73.56
GSMUA_Achr8P24010_001 Banana endoplasmic reticulum, extracellular 65.3 69.79
KRH66683 Soybean extracellular, golgi 68.62 69.16
CDY06955 Canola endoplasmic reticulum 68.03 68.7
AT2G40890.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 68.03 68.7
CDY22488 Canola cytosol, mitochondrion 47.37 68.64
KRG95042 Soybean mitochondrion 68.03 68.57
CDY14751 Canola endoplasmic reticulum 67.84 68.5
CDY35432 Canola endoplasmic reticulum, extracellular, vacuole 67.64 68.31
Bra000211.1-P Field mustard endoplasmic reticulum, extracellular 67.25 67.91
VIT_08s0040g00780.t01 Wine grape extracellular, golgi 66.86 67.52
Bra016964.1-P Field mustard endoplasmic reticulum 64.72 67.34
Solyc01g096670.2.1 Tomato endoplasmic reticulum, extracellular 67.25 67.12
CDX79965 Canola endoplasmic reticulum, extracellular, vacuole 65.5 66.27
PGSC0003DMT400018493 Potato endoplasmic reticulum, extracellular 65.11 65.75
Bra004591.1-P Field mustard endoplasmic reticulum, extracellular 64.72 65.48
Solyc10g078240.1.1 Tomato endoplasmic reticulum, extracellular 64.91 65.42
CDY23876 Canola endoplasmic reticulum, extracellular 64.33 65.09
PGSC0003DMT400075164 Potato cytosol 52.83 60.09
PGSC0003DMT400018494 Potato endoplasmic reticulum, extracellular 58.28 58.74
PGSC0003DMT400038205 Potato extracellular, golgi 57.7 58.38
PGSC0003DMT400038202 Potato extracellular, golgi 57.5 58.19
Solyc01g009370.1.1 Tomato extracellular, golgi 57.5 58.19
Solyc10g078220.1.1 Tomato endoplasmic reticulum 56.73 57.51
Solyc10g078230.1.1 Tomato endoplasmic reticulum, extracellular 56.92 57.37
PGSC0003DMT400018497 Potato endoplasmic reticulum, golgi 49.51 57.08
GSMUA_Achr4P10110_001 Banana endoplasmic reticulum, golgi 40.55 54.31
PGSC0003DMT400018498 Potato endoplasmic reticulum, golgi 30.6 50.65
EER96795 Sorghum endoplasmic reticulum 37.43 37.07
EER98976 Sorghum endoplasmic reticulum 37.04 36.75
OQU79385 Sorghum endoplasmic reticulum 38.6 36.73
EER94825 Sorghum endoplasmic reticulum, plastid 38.01 36.72
EER94822 Sorghum endoplasmic reticulum 38.21 36.5
OQU92580 Sorghum endoplasmic reticulum 34.5 36.42
EER95892 Sorghum plastid 37.62 36.42
OQU79915 Sorghum endoplasmic reticulum, plastid 37.04 36.4
EER94824 Sorghum endoplasmic reticulum, plastid 37.23 36.11
KXG25275 Sorghum endoplasmic reticulum, plastid 37.82 35.93
EER95901 Sorghum endoplasmic reticulum 37.23 35.3
EER98011 Sorghum endoplasmic reticulum, plastid 36.84 35.06
EER98974 Sorghum endoplasmic reticulum 35.67 35.06
EER94806 Sorghum endoplasmic reticulum, plasma membrane 36.26 34.96
OQU80592 Sorghum endoplasmic reticulum, golgi 35.48 34.87
EES05361 Sorghum endoplasmic reticulum, extracellular 35.09 34.82
EER98975 Sorghum plastid 35.09 34.55
OQU92546 Sorghum endoplasmic reticulum, plasma membrane 35.48 34.54
OQU85240 Sorghum endoplasmic reticulum, golgi 31.77 34.03
EES18344 Sorghum endoplasmic reticulum, plasma membrane 35.48 34.02
EES05356 Sorghum endoplasmic reticulum, golgi 34.11 33.85
KXG30541 Sorghum plastid 35.28 32.67
EES14499 Sorghum endoplasmic reticulum, golgi 33.14 32.32
Protein Annotations
Gene3D:1.10.630.10MapMan:21.6.1.2EntrezGene:8082405UniProt:C5XMI3InterPro:Cyt_P450InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sfEnsemblPlants:EES03767ProteinID:EES03767ProteinID:EES03767.1GO:GO:0003674
GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009809GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016491GO:GO:0016705GO:GO:0016709GO:GO:0019748GO:GO:0020037GO:GO:0046872
GO:GO:0055114InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086
PANTHER:PTHR24298PANTHER:PTHR24298:SF0EnsemblPlantsGene:SORBI_3003G327800SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0001A8577E
RefSeq:XP_002458647.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:-:65336670..65340440
Molecular Weight (calculated)
57910.2 Da
IEP (calculated)
8.680
GRAVY (calculated)
-0.210
Length
513 amino acids
Sequence
(BLAST)
001: METASFLSVA LALAALVPVS LLLLNRLLYG KLPPGPRRRP VVGNLFDVRP VRCRCYQEWA RRYGPIMTVW LGTTPTVVVS TSELAKEVLK THDQHLADRC
101: RDRSSERFSR GGQDLIWADY GPHYIKVRKL CNLELFTQRR LEALRPIRED EVTAMVESVY KAATAPGNEG KPLVVKNHLS MVAFNNITRL AFGKRFVNAA
201: GELDEQGREF KAIVHNGIKV GASLSIAQHI PWLRWLAPVD EQAFKAHGDR RDRLTVKIME EQAKALKQHG AQQHFVDALF TLRDKYDLSD DTVIGLLWDM
301: ITAGTDTTVI SVEWAMAELL RNPRVQEKLQ EELDDVVGRD RVLSETDFPN LPYLQAVVKE SLRLHPPTPL MLPHRASASV KIAGYDIPKG ANVVVNVWAV
401: ARDPAVWDDP LEFRPERFLR ENIDIKGADF RVLPFGAGRR VCPGAQLGIN LVASMIGHMV HHFRWTLPEG TRPEDVRMVE SPGLVTFMDT PLQAVATPRL
501: DKEELYRRVP SEI
Best Arabidopsis Sequence Match ( AT2G40890.1 )
(BLAST)
001: MSWFLIAVAT IAAVVSYKLI QRLRYKFPPG PSPKPIVGNL YDIKPVRFRC YYEWAQSYGP IISVWIGSIL NVVVSSAELA KEVLKEHDQK LADRHRNRST
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM
Arabidopsis Description
CYP98A3Cytochrome P450 98A3 [Source:UniProtKB/Swiss-Prot;Acc:O22203]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.