Factsheet for PGSC0003DMT400008504

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400019769	Potato	cytosol	42.79	39.38
VIT_08s0040g00780.t01	Wine grape	extracellular, golgi	85.58	35.04
KRH66683	Soybean	extracellular, golgi	85.58	34.97
KRG95042	Soybean	mitochondrion	84.62	34.58
GSMUA_Achr8P24010_001	Banana	endoplasmic reticulum, extracellular	76.44	33.12
PGSC0003DMT400018493	Potato	endoplasmic reticulum, extracellular	80.77	33.07
Os10t0196100-00	Rice	mitochondrion	37.98	32.92
PGSC0003DMT400075164	Potato	cytosol	69.71	32.15
EES18431	Sorghum	endoplasmic reticulum	75.96	30.86
TraesCS1D01G310000.1	Wheat	endoplasmic reticulum	75.48	30.66
Zm00001d038555_P001	Maize	plasma membrane	75.0	30.47
TraesCS1B01G321800.1	Wheat	endoplasmic reticulum	75.0	30.47
TraesCS1A01G310500.1	Wheat	golgi	75.0	30.47
HORVU0Hr1G031710.1	Barley	endoplasmic reticulum	75.0	30.35
HORVU1Hr1G068030.1	Barley	endoplasmic reticulum	75.0	30.35
Zm00001d043174_P001	Maize	mitochondrion	74.52	30.21
EES03767	Sorghum	endoplasmic reticulum, extracellular	73.56	29.82
PGSC0003DMT400038205	Potato	extracellular, golgi	71.63	29.39
PGSC0003DMT400038202	Potato	extracellular, golgi	71.63	29.39
TraesCS3B01G361900.1	Wheat	endoplasmic reticulum	71.63	29.27
HORVU3Hr1G078660.1	Barley	endoplasmic reticulum, extracellular	71.15	29.08
TraesCS3A01G331800.1	Wheat	endoplasmic reticulum	71.15	29.08
TraesCS5A01G554000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	70.67	28.82
Os05t0494000-01	Rice	plasma membrane	70.67	28.71
TraesCS3D01G325300.1	Wheat	endoplasmic reticulum	70.19	28.68
PGSC0003DMT400018494	Potato	endoplasmic reticulum, extracellular	69.71	28.49
PGSC0003DMT400083869	Potato	cytosol	41.83	24.65
TraesCSU01G032500.1	Wheat	cytosol, plasma membrane, plastid	63.46	24.54
PGSC0003DMT400019773	Potato	mitochondrion	44.23	24.02
PGSC0003DMT400018497	Potato	endoplasmic reticulum, golgi	48.56	22.7
PGSC0003DMT400063351	Potato	endoplasmic reticulum	48.08	21.98
TraesCS4B01G393700.1	Wheat	extracellular, golgi	49.52	21.73
PGSC0003DMT400001124	Potato	cytosol, endoplasmic reticulum, plastid	46.63	21.7
PGSC0003DMT400016302	Potato	cytosol, extracellular	43.75	21.46
PGSC0003DMT400075101	Potato	cytosol	43.27	20.69
PGSC0003DMT400058927	Potato	cytosol, endoplasmic reticulum, plastid	39.42	20.35
PGSC0003DMT400019779	Potato	cytosol, golgi, plastid	44.23	19.53
PGSC0003DMT400050783	Potato	cytosol, golgi, plastid	44.23	19.53
PGSC0003DMT400036189	Potato	endoplasmic reticulum	46.63	19.32
PGSC0003DMT400058930	Potato	endoplasmic reticulum, golgi	47.12	19.25
PGSC0003DMT400033313	Potato	endoplasmic reticulum, extracellular	44.23	18.55
PGSC0003DMT400002923	Potato	endoplasmic reticulum, golgi	44.71	18.45
PGSC0003DMT400061231	Potato	extracellular, golgi, plasma membrane	44.23	18.44
PGSC0003DMT400033701	Potato	endoplasmic reticulum, extracellular	43.27	18.26
PGSC0003DMT400001740	Potato	mitochondrion	39.9	18.24
PGSC0003DMT400033311	Potato	endoplasmic reticulum, extracellular	43.27	18.22
PGSC0003DMT400046535	Potato	golgi	43.27	17.68
PGSC0003DMT400014232	Potato	endoplasmic reticulum, golgi	42.79	17.49
PGSC0003DMT400016296	Potato	golgi	42.31	17.39
PGSC0003DMT400048583	Potato	endoplasmic reticulum	45.19	17.06
PGSC0003DMT400016263	Potato	extracellular	40.38	16.83
PGSC0003DMT400024894	Potato	endoplasmic reticulum, extracellular	40.87	16.77
PGSC0003DMT400036391	Potato	endoplasmic reticulum, extracellular	39.9	16.67
PGSC0003DMT400037425	Potato	endoplasmic reticulum, extracellular	39.42	16.63
PGSC0003DMT400033335	Potato	endoplasmic reticulum	39.42	16.5
PGSC0003DMT400036399	Potato	endoplasmic reticulum, extracellular	38.94	16.46
GSMUA_Achr4P10110_001	Banana	endoplasmic reticulum, golgi	30.29	16.45
PGSC0003DMT400025446	Potato	extracellular, golgi	39.42	16.27
PGSC0003DMT400065984	Potato	endoplasmic reticulum, golgi	35.1	16.01
PGSC0003DMT400004816	Potato	extracellular, golgi	41.35	12.7
PGSC0003DMT400012312	Potato	extracellular, golgi	10.58	6.25
PGSC0003DMT400025448	Potato	cytosol	2.4	2.06
PGSC0003DMT400018498	Potato	endoplasmic reticulum, golgi	1.92	1.29
TraesCSU01G032400.1	Wheat	endoplasmic reticulum	1.44	1.11
PGSC0003DMT400065985	Potato	extracellular, golgi	1.44	0.99
PGSC0003DMT400036397	Potato	mitochondrion	0.96	0.65
PGSC0003DMT400016243	Potato	endoplasmic reticulum, extracellular	0.0	0.0
PGSC0003DMT400036390	Potato	endoplasmic reticulum, extracellular	0.0	0.0

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:M0ZUN6	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400003289	PGSC:PGSC0003DMG400003289	EnsemblPlants:PGSC0003DMT400008504
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF0	SUPFAM:SSF48264
UniParc:UPI0002965FFC	:	:	:	:	:

Description

P-coumarate 3-hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400003289]

Coordinates

chr1:+:74418567..74419503

Molecular Weight (calculated)

23492.4 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.318

Length

208 amino acids

Sequence
(BLAST)

001: MDTTAISVEW AMAEVIKNPR VQQKAQEELD QVIGYERVMN ETDFPNLPYL QCVAKEALRL HPPTPLMLPH RANANVKIGG YDIPKGSNVH VNVWAVARDP
101: KVWNNPLEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MLGHLLHHFH WTPSNGLSPE EIDMGENPGL VTYMRTPLQA VATPRLPAEL
201: YKRIAVDM

Best Arabidopsis Sequence Match ( AT1G74540.1 )
(BLAST)

001: MIIYLISLLP IIVATLMLYQ RWWRSNIPPG PKPKFLLGNL HQMKPLWTHS FSEWSETYGP IISVWIGSQL TVVVSSSDLA RQVLRDKDHQ LSNRHRIARM
101: TQTGTDLVWS DYSPHYVKLR KLCTLELFSL KSIENFRSLR EMEARSMVVS ILKDLMSNSG DDQERKPVIV RKYLAAVVLN TISRLMIGKE FGSEEGKEFK
201: AIVEKEHLLS GSGTILDHVW WLKWVSSWFF SDKEFLAHKD RRTKWFRGAI MVEEDIEIED HRGFVRKLLV LKEQKELSEE TVGGLVWNML TAGADTTAVV
301: IEWAMAEMIK CPTVQEKAQQ ELDSVVGSER LMTESDIPIL PYLQCVVKEA LRLHPSTPLM LPHKASETVW VGGYKVPKGA TVYVNVQAIG RDPANWINPY
401: EFRPERFLQE ETDVKGRDFR VLPFGSGRRM CPAAQLSMNL MTLVMGNLLH CFSWSSPVPG ERIDMSENPG LLCNMRTPLQ ALALPRAAAR AIPLPLD

Arabidopsis Description

CYP98A8Cytochrome P450 98A8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA61]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.