Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G393700.1 | Wheat | extracellular, golgi | 94.81 | 54.01 |
| TraesCS5A01G554000.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 93.33 | 49.41 |
| TraesCSU01G032500.1 | Wheat | cytosol, plasma membrane, plastid | 93.33 | 46.84 |
| PGSC0003DMT400018498 | Potato | endoplasmic reticulum, golgi | 51.48 | 44.84 |
| Os05t0494000-01 | Rice | plasma membrane | 81.85 | 43.16 |
| Zm00001d038555_P001 | Maize | plasma membrane | 80.37 | 42.38 |
| EES18431 | Sorghum | endoplasmic reticulum | 80.37 | 42.38 |
| CDY35432 | Canola | endoplasmic reticulum, extracellular, vacuole | 61.11 | 32.48 |
| Solyc10g078240.1.1 | Tomato | endoplasmic reticulum, extracellular | 60.74 | 32.22 |
| KRH66683 | Soybean | extracellular, golgi | 60.74 | 32.22 |
| PGSC0003DMT400018497 | Potato | endoplasmic reticulum, golgi | 52.96 | 32.13 |
| Bra000211.1-P | Field mustard | endoplasmic reticulum, extracellular | 60.37 | 32.09 |
| AT2G40890.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 60.37 | 32.09 |
| CDY06955 | Canola | endoplasmic reticulum | 60.37 | 32.09 |
| Solyc01g096670.2.1 | Tomato | endoplasmic reticulum, extracellular | 60.74 | 31.91 |
| PGSC0003DMT400018493 | Potato | endoplasmic reticulum, extracellular | 60.0 | 31.89 |
| VIT_08s0040g00780.t01 | Wine grape | extracellular, golgi | 59.63 | 31.69 |
| CDY14751 | Canola | endoplasmic reticulum | 59.63 | 31.69 |
| KRG95042 | Soybean | mitochondrion | 59.63 | 31.63 |
| GSMUA_Achr4P10110_001 | Banana | endoplasmic reticulum, golgi | 44.44 | 31.33 |
| CDX79965 | Canola | endoplasmic reticulum, extracellular, vacuole | 58.52 | 31.16 |
| Bra004591.1-P | Field mustard | endoplasmic reticulum, extracellular | 58.52 | 31.16 |
| GSMUA_Achr8P24010_001 | Banana | endoplasmic reticulum, extracellular | 55.19 | 31.04 |
| CDY23876 | Canola | endoplasmic reticulum, extracellular | 58.15 | 30.97 |
| Bra016964.1-P | Field mustard | endoplasmic reticulum | 54.44 | 29.82 |
| PGSC0003DMT400018494 | Potato | endoplasmic reticulum, extracellular | 54.81 | 29.08 |
| Solyc10g078220.1.1 | Tomato | endoplasmic reticulum | 52.96 | 28.26 |
| Solyc10g078230.1.1 | Tomato | endoplasmic reticulum, extracellular | 52.59 | 27.9 |
| PGSC0003DMT400038205 | Potato | extracellular, golgi | 51.48 | 27.42 |
| PGSC0003DMT400038202 | Potato | extracellular, golgi | 51.11 | 27.22 |
| Solyc01g009370.1.1 | Tomato | extracellular, golgi | 51.11 | 27.22 |
| PGSC0003DMT400075164 | Potato | cytosol | 43.33 | 25.94 |
| CDY22488 | Canola | cytosol, mitochondrion | 21.48 | 16.38 |
| PGSC0003DMT400008504 | Potato | cytosol | 1.11 | 1.44 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | InterPro:Cyt_P450 | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016705 |
| GO:GO:0020037 | GO:GO:0055114 | InterPro:IPR036396 | PFAM:PF00067 | PRINTS:PR00463 | PANTHER:PTHR24298 |
| PANTHER:PTHR24298:SF0 | SUPFAM:SSF48264 | SignalP:SignalP-TM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCSU01G032400 | EnsemblPlants:TraesCSU01G032400.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:+:29730434..29732039
Molecular Weight (calculated)
30934.6 Da
IEP (calculated)
8.801
GRAVY (calculated)
-0.142
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVASLLLPL VLALVAIPIS LALLDWLRLP PGPCPWPVVG NLRQIKPVRC RCFQEWAERY GPIFSVWFGS SLTVVVSTPE LAKEVLKEHD QQLANCTRNR
101: STQRFSRNGQ DLVWADYGPH YIKVRKLCNL ELFTQKRLEA LRPIREDEVT AMVSSVHRAA TGPGNEGKPL VVRSHLAMVS FNNITRLVFG KRFMNANGDI
201: NEEGQEFKSI VNNGIKIGAS LSIVEYVWYL RWLFPLNEEL YKTHNERRDQ LTKKIIEEHE VASIISWMHC
101: STQRFSRNGQ DLVWADYGPH YIKVRKLCNL ELFTQKRLEA LRPIREDEVT AMVSSVHRAA TGPGNEGKPL VVRSHLAMVS FNNITRLVFG KRFMNANGDI
201: NEEGQEFKSI VNNGIKIGAS LSIVEYVWYL RWLFPLNEEL YKTHNERRDQ LTKKIIEEHE VASIISWMHC
001: MIIYLISLLP IIVATLMLYQ RWWRSNIPPG PKPKFLLGNL HQMKPLWTHS FSEWSETYGP IISVWIGSQL TVVVSSSDLA RQVLRDKDHQ LSNRHRIARM
101: TQTGTDLVWS DYSPHYVKLR KLCTLELFSL KSIENFRSLR EMEARSMVVS ILKDLMSNSG DDQERKPVIV RKYLAAVVLN TISRLMIGKE FGSEEGKEFK
201: AIVEKEHLLS GSGTILDHVW WLKWVSSWFF SDKEFLAHKD RRTKWFRGAI MVEEDIEIED HRGFVRKLLV LKEQKELSEE TVGGLVWNML TAGADTTAVV
301: IEWAMAEMIK CPTVQEKAQQ ELDSVVGSER LMTESDIPIL PYLQCVVKEA LRLHPSTPLM LPHKASETVW VGGYKVPKGA TVYVNVQAIG RDPANWINPY
401: EFRPERFLQE ETDVKGRDFR VLPFGSGRRM CPAAQLSMNL MTLVMGNLLH CFSWSSPVPG ERIDMSENPG LLCNMRTPLQ ALALPRAAAR AIPLPLD
101: TQTGTDLVWS DYSPHYVKLR KLCTLELFSL KSIENFRSLR EMEARSMVVS ILKDLMSNSG DDQERKPVIV RKYLAAVVLN TISRLMIGKE FGSEEGKEFK
201: AIVEKEHLLS GSGTILDHVW WLKWVSSWFF SDKEFLAHKD RRTKWFRGAI MVEEDIEIED HRGFVRKLLV LKEQKELSEE TVGGLVWNML TAGADTTAVV
301: IEWAMAEMIK CPTVQEKAQQ ELDSVVGSER LMTESDIPIL PYLQCVVKEA LRLHPSTPLM LPHKASETVW VGGYKVPKGA TVYVNVQAIG RDPANWINPY
401: EFRPERFLQE ETDVKGRDFR VLPFGSGRRM CPAAQLSMNL MTLVMGNLLH CFSWSSPVPG ERIDMSENPG LLCNMRTPLQ ALALPRAAAR AIPLPLD
Arabidopsis Description
CYP98A8Cytochrome P450 98A8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA61]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.