Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400000230 | |
| PGSC0003DMT400011903 | |
| PGSC0003DMT400011904 | |
| PGSC0003DMT400013490 | |
| PGSC0003DMT400013956 | |
| PGSC0003DMT400015793 | |
| PGSC0003DMT400018493 | endoplasmic reticulum |
| PGSC0003DMT400018494 | endoplasmic reticulum |
| PGSC0003DMT400018497 | endoplasmic reticulum |
| PGSC0003DMT400018498 | endoplasmic reticulum |
| PGSC0003DMT400019164 | |
| PGSC0003DMT400029745 | |
| PGSC0003DMT400032086 | |
| PGSC0003DMT400037158 | |
| PGSC0003DMT400038202 | endoplasmic reticulum |
| PGSC0003DMT400038205 | endoplasmic reticulum |
| PGSC0003DMT400047688 | |
| PGSC0003DMT400047969 | |
| PGSC0003DMT400048727 | |
| PGSC0003DMT400049928 | |
| PGSC0003DMT400060862 | |
| PGSC0003DMT400060959 | |
| PGSC0003DMT400072932 | |
| PGSC0003DMT400075164 | endoplasmic reticulum |
| PGSC0003DMT400078288 | endoplasmic reticulum |
| PGSC0003DMT400078290 | endoplasmic reticulum |
| PGSC0003DMT400093662 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400038202 | Potato | extracellular, golgi | 99.41 | 99.41 |
| Solyc01g009370.1.1 | Tomato | extracellular, golgi | 97.83 | 97.83 |
| PGSC0003DMT400075164 | Potato | cytosol | 69.23 | 77.83 |
| PGSC0003DMT400018494 | Potato | endoplasmic reticulum, extracellular | 76.53 | 76.23 |
| PGSC0003DMT400018497 | Potato | endoplasmic reticulum, golgi | 64.69 | 73.71 |
| PGSC0003DMT400018493 | Potato | endoplasmic reticulum, extracellular | 73.18 | 73.03 |
| PGSC0003DMT400008504 | Potato | cytosol | 29.39 | 71.63 |
| PGSC0003DMT400018498 | Potato | endoplasmic reticulum, golgi | 42.41 | 69.35 |
| VIT_08s0040g00780.t01 | Wine grape | extracellular, golgi | 66.47 | 66.34 |
| CDY22488 | Canola | cytosol, mitochondrion | 45.76 | 65.54 |
| CDY35432 | Canola | endoplasmic reticulum, extracellular, vacuole | 64.89 | 64.76 |
| KRH66683 | Soybean | extracellular, golgi | 64.69 | 64.44 |
| Bra000211.1-P | Field mustard | endoplasmic reticulum, extracellular | 64.5 | 64.37 |
| KRG95042 | Soybean | mitochondrion | 64.5 | 64.24 |
| AT2G40890.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 64.3 | 64.17 |
| CDY14751 | Canola | endoplasmic reticulum | 63.71 | 63.58 |
| CDY06955 | Canola | endoplasmic reticulum | 63.51 | 63.39 |
| GSMUA_Achr8P24010_001 | Banana | endoplasmic reticulum, extracellular | 59.76 | 63.12 |
| CDX79965 | Canola | endoplasmic reticulum, extracellular, vacuole | 63.12 | 63.12 |
| Os10t0196100-00 | Rice | mitochondrion | 29.59 | 62.5 |
| Bra016964.1-P | Field mustard | endoplasmic reticulum | 60.35 | 62.07 |
| Bra004591.1-P | Field mustard | endoplasmic reticulum, extracellular | 61.93 | 61.93 |
| CDY23876 | Canola | endoplasmic reticulum, extracellular | 61.74 | 61.74 |
| Zm00001d038555_P001 | Maize | plasma membrane | 62.13 | 61.52 |
| EES18431 | Sorghum | endoplasmic reticulum | 61.93 | 61.33 |
| TraesCS1B01G321800.1 | Wheat | endoplasmic reticulum | 60.75 | 60.16 |
| Os05t0494000-01 | Rice | plasma membrane | 60.75 | 60.16 |
| HORVU1Hr1G068030.1 | Barley | endoplasmic reticulum | 60.95 | 60.12 |
| HORVU0Hr1G031710.1 | Barley | endoplasmic reticulum | 60.95 | 60.12 |
| TraesCS1D01G310000.1 | Wheat | endoplasmic reticulum | 60.55 | 59.96 |
| TraesCS1A01G310500.1 | Wheat | golgi | 60.35 | 59.77 |
| HORVU3Hr1G078660.1 | Barley | endoplasmic reticulum, extracellular | 59.37 | 59.14 |
| TraesCS5A01G554000.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 59.17 | 58.82 |
| TraesCS3B01G361900.1 | Wheat | endoplasmic reticulum | 58.58 | 58.35 |
| Zm00001d043174_P001 | Maize | mitochondrion | 58.97 | 58.28 |
| TraesCS3D01G325300.1 | Wheat | endoplasmic reticulum | 58.19 | 57.96 |
| EES03767 | Sorghum | endoplasmic reticulum, extracellular | 58.38 | 57.7 |
| TraesCS3A01G331800.1 | Wheat | endoplasmic reticulum | 57.79 | 57.56 |
| TraesCS4B01G393700.1 | Wheat | extracellular, golgi | 52.27 | 55.91 |
| TraesCSU01G032500.1 | Wheat | cytosol, plasma membrane, plastid | 55.23 | 52.04 |
| TraesCSU01G032400.1 | Wheat | endoplasmic reticulum | 27.42 | 51.48 |
| GSMUA_Achr4P10110_001 | Banana | endoplasmic reticulum, golgi | 36.69 | 48.56 |
| PGSC0003DMT400019769 | Potato | cytosol | 18.15 | 40.71 |
| PGSC0003DMT400058927 | Potato | cytosol, endoplasmic reticulum, plastid | 29.59 | 37.22 |
| PGSC0003DMT400063351 | Potato | endoplasmic reticulum | 33.33 | 37.14 |
| PGSC0003DMT400016302 | Potato | cytosol, extracellular | 30.57 | 36.56 |
| PGSC0003DMT400058930 | Potato | endoplasmic reticulum, golgi | 36.09 | 35.95 |
| PGSC0003DMT400036189 | Potato | endoplasmic reticulum | 35.5 | 35.86 |
| PGSC0003DMT400016296 | Potato | golgi | 35.31 | 35.38 |
| PGSC0003DMT400001124 | Potato | cytosol, endoplasmic reticulum, plastid | 31.16 | 35.35 |
| PGSC0003DMT400046535 | Potato | golgi | 35.31 | 35.17 |
| PGSC0003DMT400002923 | Potato | endoplasmic reticulum, golgi | 34.71 | 34.92 |
| PGSC0003DMT400014232 | Potato | endoplasmic reticulum, golgi | 34.71 | 34.58 |
| PGSC0003DMT400083869 | Potato | cytosol | 23.08 | 33.14 |
| PGSC0003DMT400024894 | Potato | endoplasmic reticulum, extracellular | 32.74 | 32.74 |
| PGSC0003DMT400033701 | Potato | endoplasmic reticulum, extracellular | 31.76 | 32.66 |
| PGSC0003DMT400075101 | Potato | cytosol | 28.01 | 32.64 |
| PGSC0003DMT400016263 | Potato | extracellular | 31.76 | 32.26 |
| PGSC0003DMT400033313 | Potato | endoplasmic reticulum, extracellular | 31.56 | 32.26 |
| PGSC0003DMT400019773 | Potato | mitochondrion | 24.26 | 32.11 |
| PGSC0003DMT400033311 | Potato | endoplasmic reticulum, extracellular | 31.16 | 31.98 |
| PGSC0003DMT400048583 | Potato | endoplasmic reticulum | 33.92 | 31.22 |
| PGSC0003DMT400050783 | Potato | cytosol, golgi, plastid | 28.99 | 31.21 |
| PGSC0003DMT400019779 | Potato | cytosol, golgi, plastid | 28.99 | 31.21 |
| PGSC0003DMT400033335 | Potato | endoplasmic reticulum | 30.57 | 31.19 |
| PGSC0003DMT400065984 | Potato | endoplasmic reticulum, golgi | 27.81 | 30.92 |
| PGSC0003DMT400036399 | Potato | endoplasmic reticulum, extracellular | 29.98 | 30.89 |
| PGSC0003DMT400061231 | Potato | extracellular, golgi, plasma membrane | 30.37 | 30.86 |
| PGSC0003DMT400036391 | Potato | endoplasmic reticulum, extracellular | 29.98 | 30.52 |
| PGSC0003DMT400025446 | Potato | extracellular, golgi | 29.98 | 30.16 |
| PGSC0003DMT400012312 | Potato | extracellular, golgi | 20.91 | 30.11 |
| PGSC0003DMT400037425 | Potato | endoplasmic reticulum, extracellular | 29.19 | 30.02 |
| PGSC0003DMT400001740 | Potato | mitochondrion | 25.64 | 28.57 |
| PGSC0003DMT400016243 | Potato | endoplasmic reticulum, extracellular | 11.64 | 24.48 |
| PGSC0003DMT400036390 | Potato | endoplasmic reticulum, extracellular | 10.85 | 24.44 |
| PGSC0003DMT400004816 | Potato | extracellular, golgi | 31.76 | 23.78 |
| PGSC0003DMT400025448 | Potato | cytosol | 11.24 | 23.46 |
| PGSC0003DMT400065985 | Potato | extracellular, golgi | 13.61 | 22.77 |
| PGSC0003DMT400036397 | Potato | mitochondrion | 13.41 | 22.08 |
Protein Annotations
| Gene3D:1.10.630.10 | EntrezGene:102590830 | MapMan:21.6.1.2 | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I |
| InterPro:Cyt_P450_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0020037 | GO:GO:0046872 |
| GO:GO:0055114 | InterPro:IPR036396 | UniProt:M1B6H2 | PFAM:PF00067 | EnsemblPlantsGene:PGSC0003DMG402014734 | PGSC:PGSC0003DMG402014734 |
| EnsemblPlants:PGSC0003DMT400038205 | PRINTS:PR00385 | PRINTS:PR00463 | ScanProsite:PS00086 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF0 |
| SUPFAM:SSF48264 | TMHMM:TMhelix | UniParc:UPI000295AAA8 | RefSeq:XP_006362632.1 | SEG:seg | : |
Description
P-coumaroyl quinate/shikimate 3'-hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG402014734]
Coordinates
chr1:-:6747592..6755049
Molecular Weight (calculated)
57948.5 Da
IEP (calculated)
8.760
GRAVY (calculated)
-0.205
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFSLALPAL TLFLIYIAYN FYRRLKAKLP PGPRPWPIIG NLYDIEPIRF RCFAAWSEIY GPIFSFYLGS QLNVVINNAT LAKEVLKDND QNLADRFRTK
101: PLANVSRNGS DLIWADYGHH YVKVRKLCNL ELFTSKRIEA LRPIREDEVT SMIHDIFRDS TKQGKSLIMR SYLGLVAFNN ITRLTFGKRF MDSQGKVDEQ
201: GKELKEIVSN GMKIGGKLNL GDFVPWLRCF FKDDNEALKA QDSHVDRFTR VIMEEHTLAR KKTGETKQHF VDALLTLKKE YELSDDTVIG LLWDMVTAGM
301: DTVAITVEWA MAELVKNTRV QQKAQEELDR VIGSDRVITE SDMSKLSYLQ SVVKESLRLH PPTPLMLPHL ASANVKIGGY NIPKGTIVHV NVWALGRDPK
401: VWKDPLQFRP ERFIEEDIDM KGHDFRLLPF GAGRRICPGT NLAINMVTSM LAHLLHHFEW SPPIGIERDD IDMLESPGTV TYMQTPLQVV PTPRLPLHLY
501: ERGPIVI
101: PLANVSRNGS DLIWADYGHH YVKVRKLCNL ELFTSKRIEA LRPIREDEVT SMIHDIFRDS TKQGKSLIMR SYLGLVAFNN ITRLTFGKRF MDSQGKVDEQ
201: GKELKEIVSN GMKIGGKLNL GDFVPWLRCF FKDDNEALKA QDSHVDRFTR VIMEEHTLAR KKTGETKQHF VDALLTLKKE YELSDDTVIG LLWDMVTAGM
301: DTVAITVEWA MAELVKNTRV QQKAQEELDR VIGSDRVITE SDMSKLSYLQ SVVKESLRLH PPTPLMLPHL ASANVKIGGY NIPKGTIVHV NVWALGRDPK
401: VWKDPLQFRP ERFIEEDIDM KGHDFRLLPF GAGRRICPGT NLAINMVTSM LAHLLHHFEW SPPIGIERDD IDMLESPGTV TYMQTPLQVV PTPRLPLHLY
501: ERGPIVI
001: MSWFLIAVAT IAAVVSYKLI QRLRYKFPPG PSPKPIVGNL YDIKPVRFRC YYEWAQSYGP IISVWIGSIL NVVVSSAELA KEVLKEHDQK LADRHRNRST
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM
Arabidopsis Description
CYP98A3Cytochrome P450 98A3 [Source:UniProtKB/Swiss-Prot;Acc:O22203]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.