Factsheet for PGSC0003DMT400075101

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 2
endoplasmic reticulum 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400019769	Potato	cytosol	44.14	84.96
PGSC0003DMT400033311	Potato	endoplasmic reticulum, extracellular	84.83	74.7
PGSC0003DMT400083869	Potato	cytosol	60.23	74.22
PGSC0003DMT400065984	Potato	endoplasmic reticulum, golgi	72.87	69.52
PGSC0003DMT400025448	Potato	cytosol	36.32	65.02
PGSC0003DMT400065985	Potato	extracellular, golgi	45.29	65.02
PGSC0003DMT400036391	Potato	endoplasmic reticulum, extracellular	74.02	64.66
PGSC0003DMT400037425	Potato	endoplasmic reticulum, extracellular	72.64	64.1
PGSC0003DMT400033313	Potato	endoplasmic reticulum, extracellular	70.11	61.49
PGSC0003DMT400036399	Potato	endoplasmic reticulum, extracellular	68.97	60.98
PGSC0003DMT400019773	Potato	mitochondrion	52.87	60.05
PGSC0003DMT400033335	Potato	endoplasmic reticulum	65.29	57.14
PGSC0003DMT400036397	Potato	mitochondrion	40.23	56.82
PGSC0003DMT400025446	Potato	extracellular, golgi	65.06	56.15
VIT_07s0031g01370.t01	Wine grape	plastid	47.82	55.32
PGSC0003DMT400019779	Potato	cytosol, golgi, plastid	58.62	54.14
PGSC0003DMT400050783	Potato	cytosol, golgi, plastid	58.62	54.14
PGSC0003DMT400001740	Potato	mitochondrion	56.32	53.85
PGSC0003DMT400036390	Potato	endoplasmic reticulum, extracellular	27.82	53.78
PGSC0003DMT400033701	Potato	endoplasmic reticulum, extracellular	60.92	53.75
PGSC0003DMT400016263	Potato	extracellular	60.92	53.11
VIT_07s0031g01380.t01	Wine grape	mitochondrion	57.7	52.84
PGSC0003DMT400061231	Potato	extracellular, golgi, plasma membrane	59.54	51.9
VIT_07s0031g01390.t01	Wine grape	endoplasmic reticulum, extracellular	58.85	51.41
KRH43296	Soybean	endoplasmic reticulum, mitochondrion	56.09	49.49
KRH59431	Soybean	endoplasmic reticulum, mitochondrion	55.63	48.69
KRH43299	Soybean	endoplasmic reticulum, extracellular	54.25	47.39
KRH43298	Soybean	endoplasmic reticulum, golgi	54.02	47.0
PGSC0003DMT400008504	Potato	cytosol	20.69	43.27
PGSC0003DMT400016243	Potato	endoplasmic reticulum, extracellular	22.53	40.66
PGSC0003DMT400004816	Potato	extracellular, golgi	62.99	40.47
PGSC0003DMT400024894	Potato	endoplasmic reticulum, extracellular	45.98	39.45
PGSC0003DMT400063351	Potato	endoplasmic reticulum	37.93	36.26
PGSC0003DMT400001124	Potato	cytosol, endoplasmic reticulum, plastid	35.63	34.68
PGSC0003DMT400075164	Potato	cytosol	34.48	33.26
PGSC0003DMT400058927	Potato	cytosol, endoplasmic reticulum, plastid	30.8	33.25
PGSC0003DMT400016302	Potato	cytosol, extracellular	31.72	32.55
PGSC0003DMT400058930	Potato	endoplasmic reticulum, golgi	34.94	29.86
PGSC0003DMT400018494	Potato	endoplasmic reticulum, extracellular	34.25	29.27
PGSC0003DMT400048583	Potato	endoplasmic reticulum	35.86	28.31
PGSC0003DMT400038202	Potato	extracellular, golgi	32.64	28.01
PGSC0003DMT400038205	Potato	extracellular, golgi	32.64	28.01
PGSC0003DMT400014232	Potato	endoplasmic reticulum, golgi	32.41	27.7
PGSC0003DMT400018493	Potato	endoplasmic reticulum, extracellular	32.18	27.56
PGSC0003DMT400046535	Potato	golgi	31.95	27.31
PGSC0003DMT400016296	Potato	golgi	31.72	27.27
PGSC0003DMT400018497	Potato	endoplasmic reticulum, golgi	27.82	27.19
PGSC0003DMT400036189	Potato	endoplasmic reticulum	31.03	26.89
PGSC0003DMT400002923	Potato	endoplasmic reticulum, golgi	30.8	26.59
PGSC0003DMT400012312	Potato	extracellular, golgi	19.31	23.86
PGSC0003DMT400018498	Potato	endoplasmic reticulum, golgi	11.72	16.45

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:M1CUN6	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400029213	PGSC:PGSC0003DMG400029213	EnsemblPlants:PGSC0003DMT400075101
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF157	SUPFAM:SSF48264
UniParc:UPI000295F255	SEG:seg	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400029213]

Coordinates

chr12:-:51709623..51711049

Molecular Weight (calculated)

50170.0 Da

IEP (calculated)

6.853

GRAVY (calculated)

-0.190

Length

435 amino acids

Sequence
(BLAST)

001: MYVRLGLVPT IVVSSADAAE KVLRRYDHIF ASRPHHQTSQ YLSYGQKNLA FAKYGPYWHN MRKLCTVHLL SNHKIHSFQS MRKQEVELLI ESIKMEAHHH
101: VAVDLSAKIT SLNANLTCLM VFGKKYMDED FDKRGFKTVV QDAVHLAAMP NLGDFFPFLG VIDLQGFTRK LKDLSKVFDE FLERIIDEHV EYHDRKQTKD
201: FVDTMMDIMK SGEAEFPFDR THIKAILLDM LLASMDTTAS STDWILAELL RHPQVMKKLQ KELQEVVGVE RMVEESDLVN LNYLEMVVKE GMRLHPVGPL
301: FYHEAMEDCV VDGFQIHKGS RTVINCYAVQ RDPNVWPEPE KFFPERFFGS SIDFRGNDFQ LVPFGSGRRS CPGMQLGVTV VRLVVAQLVH CFEWELPNGI
401: QPCDLDIDEH FGIVTCREKP LLAIPTYRLK KQCKL

Best Arabidopsis Sequence Match ( AT3G26210.1 )
(BLAST)

001: MSIFLCFLLL LLLLLVTIIF TRKSQSSKLK LPPGPPKLPI IGNLHYLNGL PHKCLLNLWK IHGPVMQLQL GYVPLVVISS NQAAEEVLKT HDLDCCSRPE
101: TIASKTISYN FKDIGFAPYG EEWRALRKLA VIELFSLKKF NSFRYIREEE NDLLVKKLSE ASEKQSPVNL KKALFTLSAS IVCRLAFGQN LHESEFIDED
201: SMEDLASRSE KIQAKFAFSN FFPGGWILDK ITGQSKSLNE IFADLDGFFN QVLDDHLKPG RKVLETPDVV DVMIDMMNKQ SQDGSFKLTT DHIKGIISDI
301: FLAGVNTSAT TILWAMTELI RNPRVMKKVQ DEVRTVLGEK RDRITEQDLN QLNYFKLVIK ETFRLHPAAP LLLPREAMAK IKIQGYDIPE KTQIMVNVYA
401: IGRDPDLWEN PEEFKPERFV DSSVDYRGLN FELLPFGSGR RICPGMTMGI ATVELGLLNL LYFFDWGLPE GRTVKDIDLE EEGAIIIGKK VSLELVPTRR
501: Q

Arabidopsis Description

CYP71B23Cytochrome P450 71B23 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTM0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.