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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
EpiLoc:mitochondrion
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400000230
PGSC0003DMT400011903
PGSC0003DMT400011904
PGSC0003DMT400013490
PGSC0003DMT400013956
PGSC0003DMT400015793
PGSC0003DMT400018493 endoplasmic reticulum
PGSC0003DMT400018494 endoplasmic reticulum
PGSC0003DMT400018497 endoplasmic reticulum
PGSC0003DMT400018498 endoplasmic reticulum
PGSC0003DMT400019164
PGSC0003DMT400029745
PGSC0003DMT400032086
PGSC0003DMT400037158
PGSC0003DMT400038202 endoplasmic reticulum
PGSC0003DMT400038205 endoplasmic reticulum
PGSC0003DMT400047688
PGSC0003DMT400047969
PGSC0003DMT400048727
PGSC0003DMT400049928
PGSC0003DMT400060862
PGSC0003DMT400060959
PGSC0003DMT400072932
PGSC0003DMT400075164 endoplasmic reticulum
PGSC0003DMT400078288 endoplasmic reticulum
PGSC0003DMT400078290 endoplasmic reticulum
PGSC0003DMT400093662

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G40890.1 PGSC0003DMT400047969 AT1G20330.1 23175744
AT2G40890.1 PGSC0003DMT400048727 AT1G20330.1 23175744
AT2G40890.1 PGSC0003DMT400093662 AT1G20330.1 23175744
AT2G40890.1 PGSC0003DMT400011903 AT1G51570.1 23175744
AT2G40890.1 PGSC0003DMT400011904 AT1G51570.1 23175744
AT2G40890.1 PGSC0003DMT400013490 AT1G51570.1 23175744
AT2G40890.1 PGSC0003DMT400029745 AT1G51570.1 23175744
AT2G40890.1 PGSC0003DMT400060862 AT1G51570.1 23175744
AT2G40890.1 PGSC0003DMT400060959 AT1G51570.1 23175744
AT2G40890.1 PGSC0003DMT400032086 AT1G64090.2 23175744
AT2G40890.1 PGSC0003DMT400072932 AT2G03510.1 23175744
AT2G40890.1 PGSC0003DMT400015793 AT2G20990.3 23175744
AT2G40890.1 PGSC0003DMT400078288 AT2G30490.1 23175744
AT2G40890.1 PGSC0003DMT400078290 AT2G30490.1 23175744
AT2G40890.1 PGSC0003DMT400078288 AT2G30490.1 23175744
AT2G40890.1 PGSC0003DMT400078290 AT2G30490.1 23175744
AT2G40890.1 PGSC0003DMT400018493 AT2G40890.1 23175744
AT2G40890.1 PGSC0003DMT400018494 AT2G40890.1 23175744
AT2G40890.1 PGSC0003DMT400018497 AT2G40890.1 23175744
AT2G40890.1 PGSC0003DMT400018498 AT2G40890.1 23175744
AT2G40890.1 PGSC0003DMT400038202 AT2G40890.1 23175744
AT2G40890.1 PGSC0003DMT400038205 AT2G40890.1 23175744
AT2G40890.1 PGSC0003DMT400075164 AT2G40890.1 23175744
AT2G40890.1 PGSC0003DMT400000230 AT2G46170.1 23175744
AT2G40890.1 PGSC0003DMT400049928 AT2G46170.1 23175744
AT2G40890.1 PGSC0003DMT400037158 AT3G48890.1 23175744
AT2G40890.1 PGSC0003DMT400019164 AT5G22460.1 23175744
AT2G40890.1 PGSC0003DMT400032086 AT5G41600.1 23175744
AT2G40890.1 PGSC0003DMT400013956 AT5G53560.1 23175744
AT2G40890.1 PGSC0003DMT400047688 AT5G53560.1 23175744
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400018497 Potato endoplasmic reticulum, golgi 96.13 66.97
Solyc10g078220.1.1 Tomato endoplasmic reticulum 92.9 56.92
PGSC0003DMT400018494 Potato endoplasmic reticulum, extracellular 86.13 52.46
TraesCSU01G032400.1 Wheat endoplasmic reticulum 44.84 51.48
PGSC0003DMT400075164 Potato cytosol 70.32 48.34
PGSC0003DMT400038205 Potato extracellular, golgi 69.35 42.41
PGSC0003DMT400038202 Potato extracellular, golgi 69.03 42.21
PGSC0003DMT400018493 Potato endoplasmic reticulum, extracellular 65.16 39.76
VIT_08s0040g00780.t01 Wine grape extracellular, golgi 59.68 36.42
TraesCS4B01G393700.1 Wheat extracellular, golgi 52.9 34.6
KRH66683 Soybean extracellular, golgi 56.77 34.58
KRG95042 Soybean mitochondrion 56.45 34.38
AT2G40890.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 55.81 34.06
CDY35432 Canola endoplasmic reticulum, extracellular, vacuole 55.81 34.06
Bra000211.1-P Field mustard endoplasmic reticulum, extracellular 55.48 33.86
CDY06955 Canola endoplasmic reticulum 55.16 33.66
CDY14751 Canola endoplasmic reticulum 55.16 33.66
Bra004591.1-P Field mustard endoplasmic reticulum, extracellular 54.52 33.33
CDX79965 Canola endoplasmic reticulum, extracellular, vacuole 54.19 33.14
CDY23876 Canola endoplasmic reticulum, extracellular 54.19 33.14
EES18431 Sorghum endoplasmic reticulum 53.55 32.42
Zm00001d038555_P001 Maize plasma membrane 53.23 32.23
TraesCS5A01G554000.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 52.9 32.16
GSMUA_Achr4P10110_001 Banana endoplasmic reticulum, golgi 39.35 31.85
TraesCS3B01G361900.1 Wheat endoplasmic reticulum 51.61 31.43
HORVU3Hr1G078660.1 Barley endoplasmic reticulum, extracellular 51.61 31.43
TraesCS1A01G310500.1 Wheat golgi 51.61 31.25
Bra016964.1-P Field mustard endoplasmic reticulum 49.68 31.24
HORVU1Hr1G068030.1 Barley endoplasmic reticulum 51.61 31.13
TraesCS1B01G321800.1 Wheat endoplasmic reticulum 51.29 31.05
Os05t0494000-01 Rice plasma membrane 51.29 31.05
HORVU0Hr1G031710.1 Barley endoplasmic reticulum 51.29 30.93
TraesCS1D01G310000.1 Wheat endoplasmic reticulum 50.97 30.86
TraesCS3A01G331800.1 Wheat endoplasmic reticulum 50.65 30.84
GSMUA_Achr8P24010_001 Banana endoplasmic reticulum, extracellular 47.74 30.83
TraesCS3D01G325300.1 Wheat endoplasmic reticulum 50.32 30.65
Zm00001d043174_P001 Maize mitochondrion 50.65 30.6
EES03767 Sorghum endoplasmic reticulum, extracellular 50.65 30.6
TraesCSU01G032500.1 Wheat cytosol, plasma membrane, plastid 51.61 29.74
Os10t0196100-00 Rice mitochondrion 21.29 27.5
PGSC0003DMT400016243 Potato endoplasmic reticulum, extracellular 19.35 24.9
PGSC0003DMT400036390 Potato endoplasmic reticulum, extracellular 17.42 24.0
PGSC0003DMT400012312 Potato extracellular, golgi 25.48 22.44
CDY22488 Canola cytosol, mitochondrion 24.52 21.47
PGSC0003DMT400065985 Potato extracellular, golgi 20.65 21.12
PGSC0003DMT400036397 Potato mitochondrion 20.97 21.1
PGSC0003DMT400025448 Potato cytosol 15.16 19.34
PGSC0003DMT400058930 Potato endoplasmic reticulum, golgi 27.42 16.7
PGSC0003DMT400016296 Potato golgi 26.77 16.4
PGSC0003DMT400046535 Potato golgi 26.13 15.91
PGSC0003DMT400002923 Potato endoplasmic reticulum, golgi 25.48 15.67
PGSC0003DMT400058927 Potato cytosol, endoplasmic reticulum, plastid 20.32 15.63
PGSC0003DMT400036189 Potato endoplasmic reticulum 25.16 15.54
PGSC0003DMT400014232 Potato endoplasmic reticulum, golgi 25.48 15.52
PGSC0003DMT400063351 Potato endoplasmic reticulum 22.58 15.38
PGSC0003DMT400048583 Potato endoplasmic reticulum 25.81 14.52
PGSC0003DMT400016263 Potato extracellular 23.23 14.43
PGSC0003DMT400001124 Potato cytosol, endoplasmic reticulum, plastid 20.65 14.32
PGSC0003DMT400065984 Potato endoplasmic reticulum, golgi 20.97 14.25
PGSC0003DMT400033701 Potato endoplasmic reticulum, extracellular 22.58 14.2
PGSC0003DMT400024894 Potato endoplasmic reticulum, extracellular 22.9 14.0
PGSC0003DMT400037425 Potato endoplasmic reticulum, extracellular 22.26 14.0
PGSC0003DMT400033335 Potato endoplasmic reticulum 22.26 13.88
PGSC0003DMT400016302 Potato cytosol, extracellular 18.71 13.68
PGSC0003DMT400033313 Potato endoplasmic reticulum, extracellular 21.61 13.51
PGSC0003DMT400036391 Potato endoplasmic reticulum, extracellular 21.61 13.45
PGSC0003DMT400019779 Potato cytosol, golgi, plastid 20.32 13.38
PGSC0003DMT400050783 Potato cytosol, golgi, plastid 20.32 13.38
PGSC0003DMT400036399 Potato endoplasmic reticulum, extracellular 20.97 13.21
PGSC0003DMT400025446 Potato extracellular, golgi 21.29 13.1
PGSC0003DMT400061231 Potato extracellular, golgi, plasma membrane 20.65 12.83
PGSC0003DMT400033311 Potato endoplasmic reticulum, extracellular 20.0 12.55
PGSC0003DMT400001740 Potato mitochondrion 17.42 11.87
PGSC0003DMT400075101 Potato cytosol 16.45 11.72
PGSC0003DMT400004816 Potato extracellular, golgi 22.9 10.49
PGSC0003DMT400019773 Potato mitochondrion 12.26 9.92
PGSC0003DMT400083869 Potato cytosol 10.0 8.78
PGSC0003DMT400008504 Potato cytosol 1.29 1.92
PGSC0003DMT400019769 Potato cytosol 0.97 1.33
Protein Annotations
Gene3D:1.10.630.10EntrezGene:102585799MapMan:50.1.13ncoils:CoilInterPro:Cyt_P450InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0008150
GO:GO:0008152GO:GO:0016705GO:GO:0020037GO:GO:0055114InterPro:IPR036396UniProt:M1AAR4
PFAM:PF00067EnsemblPlantsGene:PGSC0003DMG400007181PGSC:PGSC0003DMG400007181EnsemblPlants:PGSC0003DMT400018498PRINTS:PR00463PANTHER:PTHR24298
PANTHER:PTHR24298:SF0SUPFAM:SSF48264UniParc:UPI0002951F39RefSeq:XP_015159577.1::
Description
P-coumaroyl quinate/shikimate 3'-hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400007181]
Coordinates
chr10:+:59495684..59497466
Molecular Weight (calculated)
35863.6 Da
IEP (calculated)
8.752
GRAVY (calculated)
-0.125
Length
310 amino acids
Sequence
(BLAST)
001: MAFPLVLSLS VFIIFLCYKL YNRLTAKLPP GPWPWPVIGN LFSITPMRFR CFAEWAQIYG PIFSFYLGSQ LNVVVNNAEL AKEVLKDNDQ NLANRFRTKP
101: LDSVSKNGMD LIWADYGPHY VKVRKLCNLE LFTQKRLEAL RPIREVEVTA MVENIFKDTT KPGNDSKTMT LRGYLGLVSF NNITRLTFGK RFINSKGEVD
201: EQGEELRAIL TDGIRISGKP NLGEFVPWLR WVFKDDNEAL ESQDRRLNKF TRLIMEEHTI AREKSGETKH HFVDALLTLQ KEYDLSDDSI ISLFWVSIHI
301: LVNIILTFIH
Best Arabidopsis Sequence Match ( AT1G74540.1 )
(BLAST)
001: MIIYLISLLP IIVATLMLYQ RWWRSNIPPG PKPKFLLGNL HQMKPLWTHS FSEWSETYGP IISVWIGSQL TVVVSSSDLA RQVLRDKDHQ LSNRHRIARM
101: TQTGTDLVWS DYSPHYVKLR KLCTLELFSL KSIENFRSLR EMEARSMVVS ILKDLMSNSG DDQERKPVIV RKYLAAVVLN TISRLMIGKE FGSEEGKEFK
201: AIVEKEHLLS GSGTILDHVW WLKWVSSWFF SDKEFLAHKD RRTKWFRGAI MVEEDIEIED HRGFVRKLLV LKEQKELSEE TVGGLVWNML TAGADTTAVV
301: IEWAMAEMIK CPTVQEKAQQ ELDSVVGSER LMTESDIPIL PYLQCVVKEA LRLHPSTPLM LPHKASETVW VGGYKVPKGA TVYVNVQAIG RDPANWINPY
401: EFRPERFLQE ETDVKGRDFR VLPFGSGRRM CPAAQLSMNL MTLVMGNLLH CFSWSSPVPG ERIDMSENPG LLCNMRTPLQ ALALPRAAAR AIPLPLD
Arabidopsis Description
CYP98A8Cytochrome P450 98A8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA61]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.