Factsheet for PGSC0003DMT400060959

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g080420.1.1	Tomato	nucleus	68.71	97.05
PGSC0003DMT400060862	Potato	cytosol	94.65	93.92
PGSC0003DMT400029745	Potato	cytosol	91.53	90.81
KRH67030	Soybean	endoplasmic reticulum, mitochondrion, nucleus	89.18	88.26
KRG95352	Soybean	endoplasmic reticulum	89.05	88.13
AT3G57880.3	Thale cress	cytosol	88.66	87.97
CDX67712	Canola	cytosol	88.66	87.86
Bra003302.1-P	Field mustard	cytosol	88.66	87.86
CDX98254	Canola	cytosol	88.53	87.73
VIT_08s0007g06170.t01	Wine grape	cytosol	88.66	87.52
CDY69710	Canola	cytosol	88.01	86.65
Bra014601.1-P	Field mustard	cytosol	87.87	86.63
KRH32992	Soybean	cytosol	86.44	85.77
AT1G51570.1	Thale cress	cytosol	86.31	85.31
Os05t0370600-01	Rice	plastid	83.96	83.2
TraesCS5B01G265100.1	Wheat	cytosol	83.44	82.69
TraesCS5A01G265400.1	Wheat	cytosol	83.44	82.69
TraesCS5D01G273300.1	Wheat	cytosol	83.31	82.56
HORVU5Hr1G073350.1	Barley	cytosol	83.18	82.43
EER90047	Sorghum	cytosol	83.05	82.19
CDY47660	Canola	endoplasmic reticulum	87.87	81.4
Zm00001d046749_P001	Maize	mitochondrion	82.01	81.16
PGSC0003DMT400011904	Potato	cytosol	81.49	81.06
Zm00001d036801_P001	Maize	plasma membrane	81.49	80.75
PGSC0003DMT400011903	Potato	cytosol	59.06	80.32
GSMUA_Achr9P12510_001	Banana	cytosol	42.24	80.0
TraesCS5B01G171600.1	Wheat	cytosol	76.53	76.13
HORVU5Hr1G053320.2	Barley	cytosol	76.4	76.01
TraesCS5D01G178600.1	Wheat	cytosol	76.14	75.75
TraesCS5A01G174100.1	Wheat	cytosol	70.01	70.38
PGSC0003DMT400055029	Potato	cytosol	69.75	69.66
PGSC0003DMT400046026	Potato	cytosol	67.41	65.36
PGSC0003DMT400013490	Potato	cytosol	45.37	64.56
PGSC0003DMT400087204	Potato	cytosol	68.32	64.53
PGSC0003DMT400030931	Potato	mitochondrion	12.65	55.11
PGSC0003DMT400014804	Potato	cytosol	69.88	53.55
PGSC0003DMT400000108	Potato	cytosol	69.88	53.12
PGSC0003DMT400065015	Potato	cytosol	72.23	49.69
PGSC0003DMT400023971	Potato	cytosol	65.58	49.03
PGSC0003DMT400089685	Potato	cytosol	65.58	49.03
PGSC0003DMT400025225	Potato	cytosol	63.49	48.22
PGSC0003DMT400065217	Potato	cytosol	54.5	39.92
PGSC0003DMT400054936	Potato	cytosol	50.46	38.43
PGSC0003DMT400088288	Potato	cytosol	48.5	36.9
PGSC0003DMT400045958	Potato	cytosol	47.85	36.88

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892	UniProt:M1C6S3	PFAM:PF00168	PFAM:PF08372
EnsemblPlantsGene:PGSC0003DMG400023712	PGSC:PGSC0003DMG400023712	EnsemblPlants:PGSC0003DMT400060959	InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR10024
PANTHER:PTHR10024:SF243	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI00029572FC	SEG:seg

Description

C2 [Source:PGSC_GENE;Acc:PGSC0003DMG400023712]

Coordinates

chr10:-:57539858..57542161

Molecular Weight (calculated)

88390.6 Da

IEP (calculated)

9.504

GRAVY (calculated)

-0.233

Length

767 amino acids

Sequence
(BLAST)

001: MTLLKETKPH LGGGKVMGDK LTSTYDLVEQ MQYLYVRVVK AKDLPAKDVT GSLDPYVEVR LGNYRGTTRH FEKKSNPEWN QVFAFSKERI QASVLEVNVK
101: DKDFIKDDFV GRVMFDLNDI PKRVPPDSPL APQWYRLEDR SGNKVKGELM LAVWMGTQAD EAFPESWHSD AATVSGADAL ANIRSKVYLS PKLWYLRVNV
201: IEAQDLIPGD RSRFPEVYVK AILGNQALRT RVSMSKTINP MWNEDLMFVA AEPFEEPLIL SVEDRVAPNN DDVLGRCAIP LQYIERRLDH RPINSKWYNL
301: EKHIIVEGEK KKEIKFASRI HMRLYLEGGY HVLDESTHYS SDLRPTAKQL WKSSIGVLEL GILNAQGLSP MKTKDNRATT DAYCVAKYGQ KWIRTRTIID
401: SFAPKWNEQY TWEVFDPCTV ITIGVFDNCH LHGGDKPGGA RDSRIGKVRI RLSTLETDRV YTHSYPLLVL HPTGVKKMGE IHLAVRFTCS SLMNMMHMYS
501: QPLLPKMHYI HPLTVTQLDS LRHQATQIVS MRLSRAEPPL RKEIVEYMLD VGSHMWSMRR SKANFFRIMG VLGGLIAIGR WFDQICNWKN PITTVLIHIL
601: FLILVLYPEL ILPTIFLYLF LIGVWYYRWR PRHPPHMDTR LSCADNANPD ELDEEFDTFP TPRPPDIVRM RYDRLRSIAG RIQTVVGDLA TQGERLQSLL
701: SWRDPRATAL FVLFCLIAAI VLYVTPFQVV ALLSGFYVLR HPRFRHKLPS APLNFFRRLP ARTDCML

Best Arabidopsis Sequence Match ( AT3G57880.4 )
(BLAST)

001: MQRPPPEDFS LKETRPHLGG GKLSGDKLTS TYDLVEQMQY LYVRVVKAKE LPGKDMTGSC DPYVEVKLGN YKGTTRHFEK KSNPEWNQVF AFSKDRIQAS
101: FLEATVKDKD FVKDDLIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV
301: NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR
401: TRTIIDSFTP RWNEQYTWEV FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG VKKMGEIHLA VRFTCSSLLN
501: MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT RAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT
601: VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE
701: RLQSLLSWRD PRATALFVLF CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML

Arabidopsis Description

Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.