Factsheet for Zm00001d046749_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90047	Sorghum	cytosol	96.9	96.9
Zm00001d036801_P001	Maize	plasma membrane	95.48	95.61
Os05t0370600-01	Rice	plastid	93.42	93.54
HORVU5Hr1G073350.1	Barley	cytosol	92.9	93.02
TraesCS5B01G265100.1	Wheat	cytosol	92.77	92.89
TraesCS5A01G265400.1	Wheat	cytosol	92.65	92.76
TraesCS5D01G273300.1	Wheat	cytosol	92.65	92.76
Solyc10g080420.1.1	Tomato	nucleus	59.1	84.35
GSMUA_Achr1P09320_001	Banana	cytosol	62.71	82.94
AT3G57880.3	Thale cress	cytosol	82.71	82.92
Bra003302.1-P	Field mustard	cytosol	82.71	82.82
CDX67712	Canola	cytosol	82.71	82.82
CDX98254	Canola	cytosol	82.58	82.69
Solyc10g078680.1.1	Tomato	cytosol	80.26	82.49
PGSC0003DMT400029745	Potato	cytosol	82.19	82.41
PGSC0003DMT400060959	Potato	cytosol	81.16	82.01
CDY69710	Canola	cytosol	82.32	81.9
Bra014601.1-P	Field mustard	cytosol	82.19	81.88
VIT_08s0007g06170.t01	Wine grape	cytosol	81.81	81.6
KRH67030	Soybean	endoplasmic reticulum, mitochondrion, nucleus	81.42	81.42
KRG95352	Soybean	endoplasmic reticulum	81.42	81.42
Solyc10g080430.1.1	Tomato	nucleus	80.77	80.88
PGSC0003DMT400060862	Potato	cytosol	80.65	80.85
AT1G51570.1	Thale cress	cytosol	80.52	80.41
KRH32992	Soybean	cytosol	79.48	79.69
KRH29670	Soybean	cytosol	77.81	77.61
AT5G12970.1	Thale cress	cytosol	76.77	77.37
CDY68091	Canola	cytosol	76.26	76.85
CDX78498	Canola	cytosol	76.26	76.85
CDX97214	Canola	cytosol	76.26	76.85
Bra006172.1-P	Field mustard	cytosol	76.13	76.72
CDY47660	Canola	endoplasmic reticulum	81.94	76.69
Bra008867.1-P	Field mustard	cytosol	76.0	76.59
CDX70485	Canola	cytosol	75.87	76.46
KRH10160	Soybean	cytosol	75.87	75.97
KRH23178	Soybean	cytosol	75.87	75.87
VIT_06s0004g01550.t01	Wine grape	cytosol, peroxisome, plasma membrane	71.35	72.19
PGSC0003DMT400011904	Potato	cytosol	71.61	71.98
PGSC0003DMT400011903	Potato	cytosol	51.35	70.57
Zm00001d036804_P001	Maize	cytosol	60.39	69.23
Solyc01g006620.2.1	Tomato	cytosol	68.39	69.01
PGSC0003DMT400055029	Potato	cytosol	68.26	68.88
VIT_13s0064g01400.t01	Wine grape	cytosol	69.03	67.55
Solyc02g044030.1.1	Tomato	cytosol, nucleus, unclear	28.26	64.6
Solyc01g086700.2.1	Tomato	cytosol	66.19	64.12
PGSC0003DMT400087204	Potato	cytosol	65.81	62.81
PGSC0003DMT400013490	Potato	cytosol	42.58	61.22
Zm00001d010202_P001	Maize	plasma membrane	62.19	59.58
Zm00001d038340_P001	Maize	plasma membrane, plastid	61.94	59.33
Bra027570.1-P	Field mustard	cytosol	56.77	57.89
KRH48448	Soybean	cytosol	52.52	57.49
KRH39245	Soybean	cytosol	54.19	56.0
AT4G20080.1	Thale cress	cytosol	55.1	55.17
Zm00001d003321_P001	Maize	cytosol	61.03	54.81
CDY13087	Canola	cytosol	31.61	53.49
Zm00001d051389_P001	Maize	cytosol	53.55	53.48
Zm00001d001785_P001	Maize	plasma membrane	68.0	52.08
AT5G44760.1	Thale cress	cytosol	31.74	51.46
CDY57334	Canola	cytosol	29.16	51.13
CDY49185	Canola	cytosol	22.06	50.89
Zm00001d026650_P001	Maize	cytosol	67.23	50.83
Zm00001d006371_P001	Maize	cytosol	64.13	49.11
KRH43466	Soybean	plasma membrane	14.19	48.89
Zm00001d021494_P001	Maize	cytosol	63.23	47.85
Zm00001d002939_P001	Maize	cytosol, nucleus, plasma membrane	63.74	46.78
Zm00001d018473_P001	Maize	cytosol	60.39	46.57
KRH15602	Soybean	plasma membrane	46.32	46.32
Zm00001d013654_P001	Maize	plasma membrane	50.19	37.19
Zm00001d011239_P001	Maize	cytosol, mitochondrion, plasma membrane	52.0	37.18
Zm00001d053062_P001	Maize	cytosol	42.71	33.1
Zm00001d018871_P001	Maize	cytosol	44.9	32.52

Protein Annotations

EntrezGene:100273873	Gene3D:2.60.40.150	MapMan:35.1	ProteinID:AQL04971.1	InterPro:C2_dom	InterPro:C2_domain_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016757	InterPro:IPR000008	InterPro:IPR035892	UniProt:K7VBA9	PFAM:PF00168	PFAM:PF08372
InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR10024	PANTHER:PTHR10024:SF243	SMART:SM00239	SUPFAM:SSF49562
TMHMM:TMhelix	UniParc:UPI000220B29F	EnsemblPlantsGene:Zm00001d046749	EnsemblPlants:Zm00001d046749_P001	EnsemblPlants:Zm00001d046749_T001	SEG:seg

Description

Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein

Coordinates

chr9:+:104340583..104342910

Molecular Weight (calculated)

89159.3 Da

IEP (calculated)

9.435

GRAVY (calculated)

-0.244

Length

775 amino acids

Sequence
(BLAST)

001: MMQRPPLRPE EYSLKETTPH LGGAAAGDKL TTTYDLVEQM QYLYVRVVKA KELPNKDITG SCDPYVEVKL GNYKGQTGHF EKKNNPEWNQ VFAFAKERIQ
101: SSVVEILVKD KDLVKDDFIG RVIFDLNEVP KRVPPDSPLA PQWYRLEDRN GHKVKGELML AVWMGTQADE AFPEAWHSDA ASVPGDGLAS IRSKVYLTPK
201: LWYLRVNVIE AQDLIPNDKT RFPEVYVKAM LGNQVQRTRA LASRTLNPLW NEDLMFVAAE PFEEHLVLSV EDRVAPGKDE VIGRTIIALQ HVPRRLDHRL
301: LTSQWYNLEK HVIIDGEQKK ETKFSSRIHL RICLEGGYHV LDESTHYSSD LRPTAKPLWK PSIGILELGI LTAQGLLPMK TKDGRGTTDA YCVAKYGQKW
401: VRTRTIIDSF TPKWNEQYTW EVYDPCTVVT IGVFDNCHLN GGEKANGARD TRIGKVRIRL STLETDRVYT HSYPLIVLTP GGVKKMGEVQ LAVRFTCSSL
501: LNMMHLYSQP LLPKMHYVHP LSVIQVDNLR RQATSIVSTR LGRAEPPLRK EIVEYMLDVD SHMWSMRKSK ANFFRITGVL SPLFAVARWF DQICHWKNPL
601: TTVLIHVLFM ILVLYPELIL PTIFLYLFLI GVWYYRWRPR QPPHMDTRLS HAETAHPDEL DEEFDTFPTS RPPDLVRMRY DKLRSVAGRI QTVVGDLATQ
701: GERLQSLLSW RDPRATALFV VFCFVAAIVL YVTPFRVVVF LAGLYVLRHP RFRHKMPSVP LNFFRRLPAR TDSML

Best Arabidopsis Sequence Match ( AT3G57880.4 )
(BLAST)

001: MQRPPPEDFS LKETRPHLGG GKLSGDKLTS TYDLVEQMQY LYVRVVKAKE LPGKDMTGSC DPYVEVKLGN YKGTTRHFEK KSNPEWNQVF AFSKDRIQAS
101: FLEATVKDKD FVKDDLIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV
301: NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR
401: TRTIIDSFTP RWNEQYTWEV FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG VKKMGEIHLA VRFTCSSLLN
501: MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT RAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT
601: VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE
701: RLQSLLSWRD PRATALFVLF CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML

Arabidopsis Description

Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.