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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003302.1-P Field mustard cytosol 99.87 99.87
CDX98254 Canola cytosol 98.84 98.84
CDY69710 Canola cytosol 97.8 97.18
AT3G57880.3 Thale cress cytosol 96.64 96.77
CDY47660 Canola endoplasmic reticulum 97.67 91.3
KRG95352 Soybean endoplasmic reticulum 91.21 91.1
KRH67030 Soybean endoplasmic reticulum, mitochondrion, nucleus 91.09 90.97
Solyc10g080420.1.1 Tomato nucleus 63.7 90.79
VIT_08s0007g06170.t01 Wine grape cytosol 89.28 88.93
PGSC0003DMT400060959 Potato cytosol 87.86 88.66
KRH32992 Soybean cytosol 88.5 88.62
PGSC0003DMT400060862 Potato cytosol 88.11 88.23
PGSC0003DMT400029745 Potato cytosol 88.11 88.23
Solyc10g078680.1.1 Tomato cytosol 85.66 87.93
Solyc10g080430.1.1 Tomato nucleus 87.6 87.6
TraesCS5D01G273300.1 Wheat cytosol 83.72 83.72
EER90047 Sorghum cytosol 83.72 83.61
TraesCS5B01G265100.1 Wheat cytosol 83.59 83.59
TraesCS5A01G265400.1 Wheat cytosol 83.46 83.46
HORVU5Hr1G073350.1 Barley cytosol 83.46 83.46
Os05t0370600-01 Rice plastid 83.33 83.33
GSMUA_Achr9P12510_001 Banana cytosol 43.54 83.21
Zm00001d046749_P001 Maize mitochondrion 82.82 82.71
CDY68091 Canola cytosol 81.91 82.44
Zm00001d036801_P001 Maize plasma membrane 82.04 82.04
CDX97214 Canola cytosol 81.4 81.92
CDX78498 Canola cytosol 80.36 80.88
CDX70485 Canola cytosol 79.84 80.36
TraesCS5B01G171600.1 Wheat cytosol 77.13 77.43
HORVU5Hr1G053320.2 Barley cytosol 77.0 77.3
TraesCS5D01G178600.1 Wheat cytosol 76.61 76.91
PGSC0003DMT400011904 Potato cytosol 75.32 75.62
PGSC0003DMT400011903 Potato cytosol 54.01 74.11
TraesCS5A01G174100.1 Wheat cytosol 70.54 71.56
CDX81020 Canola cytosol 36.82 71.43
Solyc02g044030.1.1 Tomato cytosol, nucleus, unclear 29.72 67.85
CDY33906 Canola nucleus 20.8 66.81
CDY70344 Canola cytosol 42.89 65.87
PGSC0003DMT400013490 Potato cytosol 44.44 63.82
CDX80994 Canola cytosol 8.01 60.19
CDX98964 Canola endoplasmic reticulum, extracellular 10.72 58.87
CDY42494 Canola cytosol, plasma membrane 31.91 58.81
CDX71747 Canola cytosol 56.72 57.84
CDX81021 Canola cytosol 20.93 56.45
CDY13087 Canola cytosol 32.95 55.68
CDY57334 Canola cytosol 30.49 53.39
CDY49185 Canola cytosol 23.13 53.27
CDX86768 Canola cytosol 68.48 52.48
CDY04800 Canola cytosol 66.67 51.24
CDY21373 Canola cytosol 66.67 50.89
CDX86328 Canola cytosol 65.89 50.05
CDY01973 Canola cytosol 61.63 48.13
CDY54062 Canola cytosol 61.5 47.84
CDY10076 Canola cytosol, nucleus, plasma membrane 59.3 47.08
CDX74344 Canola cytosol 59.17 47.07
CDX91899 Canola cytosol 58.79 46.52
CDY32530 Canola cytosol 59.3 46.41
CDX89108 Canola cytosol 53.88 45.38
CDY48929 Canola cytosol 56.85 44.62
CDX77002 Canola cytosol, peroxisome, plasma membrane 31.27 40.88
CDX85853 Canola cytosol 54.13 40.13
CDX68168 Canola cytosol 53.88 39.9
CDX80993 Canola extracellular 4.52 39.33
CDY35342 Canola cytosol, peroxisome, plasma membrane 24.68 39.3
CDY21171 Canola cytosol 50.9 38.74
CDY29951 Canola cytosol 51.03 38.69
CDX71710 Canola cytosol 37.08 37.61
CDY38472 Canola cytosol 47.67 36.79
CDY25472 Canola cytosol 47.55 36.76
CDY35343 Canola golgi 13.18 36.43
CDY11377 Canola cytosol 37.21 35.82
CDY13273 Canola cytosol 18.73 31.39
CDX71748 Canola cytosol 0.65 2.76
Protein Annotations
EnsemblPlants:CDX67712EnsemblPlantsGene:GSBRNA2T00098897001Gene3D:2.60.40.150GO:A0A078BU32InterPro:C2_domInterPro:C2_domain_sf
InterPro:IPR000008InterPro:IPR035892InterPro:PRibTrfase_CPANTHER:PTHR10024PANTHER:PTHR10024:SF243PFAM:PF00168
PFAM:PF08372PFscan:PS50004ProteinID:CDX67712ProteinID:CDX67712.1SEG:segSMART:SM00239
SUPFAM:SSF49562TMHMM:TMhelixUniParc:UPI0004EECEFBMapMan:35.1::
Description
BnaA07g17520D
Coordinates
chrLK031787:-:1922517..1925894
Molecular Weight (calculated)
89131.3 Da
IEP (calculated)
9.370
GRAVY (calculated)
-0.264
Length
774 amino acids
Sequence
(BLAST)
001: MMQRPPPEDF SLKETRPHLG GGKVTGDKLT STYDLVEQMQ YLYVRVVKAK ELPGKDLTGS CDPYVEVKLG NYKGTTRHFE KKSNPEWNQV FAFSKDRIQA
101: SFLEATVKDK DVVKDDLIGR VVFDLNEVPK RVPPDSPLAP QWYRLEDRKG EKVKGELMLA VWFGTQADEA FPEAWHSDAA TVSGTDALAN IRSKVYLSPK
201: LWYLRVNVIE AQDLIPSDKG RYPEVYVKAI VGNQAQRTRV SQSRTINPMW NEDLMFVAAE PFEEPLILSV EDRVAPNKDE VLGRCAIPLQ YLDRRFDHRP
301: VNTKWYNLEK HIMVDGEKKE IKFASKIHMR ICLEGGYHVL DESTHYSSDL RPTAKQLWKP NIGVLELGIL NATGLMPMKA KDGRGTTDAY CVAKYGQKWI
401: RTRTIIDSFT PRWNEQYTWE VFDPCTVVTV GVFDNCHLHG GEKNGGGKDS RVGKVRIRLS TLETDRVYTH SYPLLVLHPN GVKKMGEIHL AVRFTCSSLL
501: NMMHMYSLPL LPKMHYIHPL TVSQLDNLRH QATQIVSMRL TRAEPPLRKE VVEYMLDVGS HMWSMRRSKA NFFRIMGVLS GLIAVGKWFE QICNWKNPIT
601: TVLIHLLFII LVLYPELILP TIFLYLFLIG VWYYRWRPRH PPHMDTRLSH ADSAHPDELD EEFDTFPTSR PSDIVRMRYD RLRSIAGRIQ TVVGDLATQG
701: ERLQSLLSWR DPRATALFVL FCLIAAVVLY VTPFQVVALL VGIYVLRHPR FRYRLPSVPL NFFRRLPART DCML
Best Arabidopsis Sequence Match ( AT3G57880.4 )
(BLAST)
001: MQRPPPEDFS LKETRPHLGG GKLSGDKLTS TYDLVEQMQY LYVRVVKAKE LPGKDMTGSC DPYVEVKLGN YKGTTRHFEK KSNPEWNQVF AFSKDRIQAS
101: FLEATVKDKD FVKDDLIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV
301: NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR
401: TRTIIDSFTP RWNEQYTWEV FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG VKKMGEIHLA VRFTCSSLLN
501: MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT RAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT
601: VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE
701: RLQSLLSWRD PRATALFVLF CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML
Arabidopsis Description
Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.