CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42494	Canola	cytosol, plasma membrane	49.54	89.52
CDY48929	Canola	cytosol	96.44	74.24
CDX89108	Canola	cytosol	84.06	69.42
AT3G61300.1	Thale cress	cytosol	84.32	65.84
CDX98254	Canola	cytosol	58.1	56.98
CDY69710	Canola	cytosol	58.37	56.87
CDX67712	Canola	cytosol	57.84	56.72
CDX81020	Canola	cytosol	29.64	56.39
CDX97214	Canola	cytosol	56.92	56.18
CDX78498	Canola	cytosol	56.79	56.05
CDX70485	Canola	cytosol	56.65	55.92
CDY68091	Canola	cytosol	56.52	55.79
CDX98964	Canola	endoplasmic reticulum, extracellular	10.01	53.9
CDY47660	Canola	endoplasmic reticulum	58.37	53.5
GSMUA_Achr1P00330_001	Banana	cytosol	31.75	53.2
KRH65054	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	17.26	52.82
CDY70344	Canola	cytosol	34.39	51.79
CDX80994	Canola	cytosol	6.72	49.51
CDY13087	Canola	cytosol	27.93	46.29
GSMUA_AchrUn_...	Banana	cytosol	35.31	45.66
VIT_15s0046g03030.t01	Wine grape	cytosol	61.13	45.58
PGSC0003DMT400000108	Potato	cytosol	60.34	45.39
CDX81021	Canola	cytosol	17.13	45.3
Solyc01g094410.2.1	Tomato	nucleus	59.95	45.09
CDY49185	Canola	cytosol	19.76	44.64
CDY57334	Canola	cytosol	25.82	44.34
CDY01973	Canola	cytosol	56.26	43.09
CDX86768	Canola	cytosol	57.31	43.07
CDY54062	Canola	cytosol	56.39	43.02
KRH48167	Soybean	endoplasmic reticulum, nucleus	55.99	42.42
KRH00708	Soybean	cytosol	56.65	42.28
CDX74344	Canola	cytosol	54.15	42.24
KRH65087	Soybean	endoplasmic reticulum, mitochondrion, nucleus	55.73	42.17
EER99386	Sorghum	cytosol	55.86	42.15
KRH40482	Soybean	cytosol	56.39	42.13
Os07t0483500-01	Rice	cytosol	55.99	42.04
CDX91899	Canola	cytosol	53.89	41.82
Zm00001d006371_P001	Maize	cytosol	55.73	41.8
Zm00001d021494_P001	Maize	cytosol	55.73	41.31
CDY21373	Canola	cytosol	55.07	41.22
CDY04800	Canola	cytosol	54.68	41.21
TraesCS2D01G234800.1	Wheat	cytosol	55.2	40.44
TraesCS2B01G261000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	55.34	40.31
HORVU4Hr1G079830.2	Barley	plasma membrane	55.34	40.04
GSMUA_Achr3P03790_001	Banana	cytosol	6.85	39.69
TraesCS2A01G238900.1	Wheat	cytosol	55.2	39.45
CDX86328	Canola	cytosol	52.83	39.35
CDY10076	Canola	cytosol, nucleus, plasma membrane	50.2	39.08
CDY32530	Canola	cytosol	50.46	38.73
CDX80993	Canola	extracellular	4.35	37.08
CDX77002	Canola	cytosol, peroxisome, plasma membrane	27.93	35.81
CDY35342	Canola	cytosol, peroxisome, plasma membrane	22.53	35.19
CDX85853	Canola	cytosol	46.9	34.1
CDX68168	Canola	cytosol	46.9	34.07
CDX71710	Canola	cytosol	33.73	33.55
CDY33906	Canola	nucleus	10.54	33.2
CDY21171	Canola	cytosol	44.4	33.14
CDY29951	Canola	cytosol	44.53	33.1
CDY38472	Canola	cytosol	43.61	33.0
CDY25472	Canola	cytosol	43.35	32.87
CDY11377	Canola	cytosol	33.73	31.84
CDY35343	Canola	golgi	11.73	31.79
CDY13273	Canola	cytosol	15.02	24.68
CDX71748	Canola	cytosol	0.79	3.31

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	GO:A0A078C4C0	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDX71747
ProteinID:CDX71747	ProteinID:CDX71747.1	ncoils:Coil	EnsemblPlantsGene:GSBRNA2T00155445001	InterPro:IPR000008	InterPro:IPR035892
PFAM:PF00168	PFAM:PF08372	PRINTS:PR00360	InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR10024
PANTHER:PTHR10024:SF219	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI0004EEE545	SEG:seg

Description

BnaC08g31270D

Coordinates

chrLK031795:-:291187..293466

Molecular Weight (calculated)

87031.4 Da

IEP (calculated)

9.497

GRAVY (calculated)

-0.222

Length

759 amino acids

Sequence
(BLAST)

001: MGFDPTPPDF SIKETNPILG GGRQARNIRA HDLVEPMEFL YVKIVKARNL PTMDPTGSLD PYVEVKLGNF TARTKHFEKN KNPIWNEVFA FSKSDQQSDH
101: LEVIVMDKDV IKDDFVGSIR FDLREIPTRV APDSPLAPEW YVVNVEKGGE IMLAVWFGTQ ADEAFSDATY SDALTALNKS SVRSKIYHSP RLWYLRVNVI
201: EAQDLVIVPD RTRAPNPYVK IKLGNQMVRT KPSQLLNPRW NEEFTLVAAE PFEDLEISIE DRVAVNREET LGLVKIPFDI IERRVSDNRI VPNRWFSLKF
301: ENQRRARVAT TRVLLNVCLE GGYHVLDEST YYSSDFRPSM KELWTRQQPS LGVLELGILG VEGLNVSHDG KKETVDAYCV AKYGTKWVRT RTVTNCFNPR
401: FNEQYTWEVY EPATVITIGV FDNNQINGGN NKDGKIGKVR VRISTLESGR LYTNSYPLLI LRPSGVKNMG ELHLAIRFTC TSMFQMLVQY WKPLLPKMHY
501: VRPLKVVHQE ILRQHAVSLV AARLSRTEPP LRKEVIEYIT GSDSHFWSIR KSRANFFRLK SVLSGLLGTG EWFQDICTWK KPVASAAVHV LYLAFVCLPE
601: MILPITSLCL FMLGVWNYRL RPRQPPHMDT RLSFADNVHP EELNEEFDTF PYSSQDPAVV KMRYERLRSI ASRAQTVVGD IAGQGERVQA LLSWRDPRAT
701: SIFMVLCLVS SVVLYVVPFK VFVLLGGLYI MRHPRFRRKT PPGLVNFFKR LPAKTDCML

Best Arabidopsis Sequence Match ( AT3G61300.1 )
(BLAST)

001: MMSNLKLGVE VISARLKPRE DYGGVNAYVE LRFDDQKVIT MTKIDDSSPV WNEKFFFNIS DTEDLSNQFL DAYVYNKTSS ITKSCLGKIR ILGTAFLPYS
101: EAVGLPYPLE KEKWSMFSSA AANGGELALK VFLTDNPSPK VPNLISTKKI PSKSRHKFHN IPTNESNHSP RGNQQSFQPQ PPPPQSQTAL PPPMMESSLY
201: QAPRFGTPIP TTMGFNPNPP DYSIKETKPI LGGGKRARSS DHDLVEPMEF LFIKIVKARN LPSMDLTGSL DPYIEVKLGN YTGKTKHFEK NQNPVWNEVF
301: AFSKSNQQSN VLEVIVMDKD MVKDDFVGLI RFDLNQIPTR VAPDSPLAPE WYRVNNEKGG EIMLAVWFGT QADEAFSDAT YSDALNAVNK SSLRSKVYHS
401: PRLWYLRVNV IEAQDLVIVP DRTRLPNPYV KIRLNNQVVR TKPSHSLNPR WNEEFTLVAA EPFEDLIISI EDRVAPNREE TLGEVHIPIG TIDKRIDDNR
501: TVPNRWFSLK TENQRRVRFA TTRLHLNVCL EGGYHVLDES TYYSSDFRPS MKELLSHKQP SFGVLELGIL RIEGLNLSQE GKKETVDAYC VAKYGTKWVR
601: TRTVTNCLNP RFNEQYTWEV YEPATVITIG VFDNNQINSG NGNKGDGKIG KIRVRISTLE AGRIYSHSYP LLVLRPSGLK KMGELHLAIR FSCSSMFQML
701: MQYWKPLLPK MHYARPLKVV QQEILRQHAV NLVAARLSRA EPPLRKEVVE YISDSNSHLW SMRKSRANLF RLSSVFSGLL GTGEWFQDIC RWKKPVETTA
801: IHIIFLVLVC SPEMILPVMS LCLFMLGVWN YRLRPRQPPH MDTRLSFADN IHPEELNEEF DTFPFSSQDP GIVKMRYERL RSIASRAQTV VGDIAGQGER
901: VQALLSWRDP RATSIFMVLC LVSTVVLYVV PFKVFVLLAG LYIMRPPRFR GKTPPGPINF FRRLPAKTDC ML

Arabidopsis Description

Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2D4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.