CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71748	Canola	cytosol	17.75	45.3
Bra035212.1-P	Field mustard	cytosol	95.24	43.48
CDX86768	Canola	cytosol	94.59	43.27
AT4G11610.1	Thale cress	cytosol	90.04	41.15
CDX81021	Canola	cytosol	24.68	39.72
KRH27936	Soybean	cytosol	65.8	30.22
CDY35343	Canola	golgi	17.75	29.29
GSMUA_Achr2P03960_001	Banana	cytosol	43.51	28.8
PGSC0003DMT400014804	Potato	cytosol	61.04	28.17
Solyc08g008020.1.1	Tomato	plastid	60.82	28.1
GSMUA_AchrUn_...	Banana	cytosol	56.28	27.72
KRH77531	Soybean	plasma membrane	57.36	27.35
Os04t0683800-01	Rice	plasma membrane, plastid	57.58	26.31
KXG27468	Sorghum	cytosol	56.49	25.79
TraesCS2A01G582000.1	Wheat	cytosol	56.06	25.49
TraesCS2B01G605000.1	Wheat	cytosol	56.06	25.49
TraesCS2D01G598200.1	Wheat	cytosol	56.06	25.49
HORVU2Hr1G123760.1	Barley	cytosol	56.06	25.49
Zm00001d001785_P001	Maize	plasma membrane	55.41	25.3
Zm00001d026650_P001	Maize	cytosol	55.41	24.98
CDY70344	Canola	cytosol	25.11	23.02
CDX74344	Canola	cytosol	48.27	22.92
CDY01973	Canola	cytosol	48.7	22.7
CDY54062	Canola	cytosol	48.7	22.61
CDX91899	Canola	cytosol	47.19	22.29
CDY13087	Canola	cytosol	21.0	21.18
CDY57334	Canola	cytosol	20.13	21.04
CDY48929	Canola	cytosol	43.07	20.18
CDX89108	Canola	cytosol	39.83	20.02
GSMUA_Achr1P06800_001	Banana	cytosol	28.79	19.82
CDY21373	Canola	cytosol	41.77	19.03
CDY04800	Canola	cytosol	41.34	18.97
CDX67712	Canola	cytosol	31.39	18.73
VIT_02s0025g03610.t01	Wine grape	cytosol	63.2	18.65
CDX98254	Canola	cytosol	31.17	18.6
CDY69710	Canola	cytosol	30.74	18.23
CDX97214	Canola	cytosol	30.3	18.21
CDX78498	Canola	cytosol	30.3	18.21
CDY68091	Canola	cytosol	30.3	18.21
CDX70485	Canola	cytosol	29.87	17.95
CDY47660	Canola	endoplasmic reticulum	32.03	17.87
CDY32530	Canola	cytosol	37.66	17.59
CDY10076	Canola	cytosol, nucleus, plasma membrane	36.36	17.23
CDX86328	Canola	cytosol	36.58	16.58
CDX80993	Canola	extracellular	3.03	15.73
CDX71747	Canola	cytosol	24.68	15.02
CDY29951	Canola	cytosol	33.12	14.99
CDY21171	Canola	cytosol	32.9	14.95
CDX85853	Canola	cytosol	31.82	14.08
CDX68168	Canola	cytosol	31.6	13.97
CDY38472	Canola	cytosol	29.44	13.56
CDY25472	Canola	cytosol	28.79	13.29
CDX77002	Canola	cytosol, peroxisome, plasma membrane	14.29	11.15
CDX71710	Canola	cytosol	17.32	10.48
CDY11377	Canola	cytosol	17.1	9.83
CDY33906	Canola	nucleus	4.76	9.13
CDX98964	Canola	endoplasmic reticulum, extracellular	2.16	7.09
CDY49185	Canola	cytosol	3.46	4.76
CDX80994	Canola	cytosol	0.65	2.91
CDX81020	Canola	cytosol	1.95	2.26
CDY42494	Canola	cytosol, plasma membrane	1.52	1.67
CDY35342	Canola	cytosol, peroxisome, plasma membrane	0.65	0.62

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	GO:A0A078FLV5	UniProt:A0A078FLV5	InterPro:C2_dom	InterPro:C2_domain_sf
EnsemblPlants:CDY13273	ProteinID:CDY13273	ProteinID:CDY13273.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00071230001	InterPro:IPR000008	InterPro:IPR035892	PFAM:PF00168	PFscan:PS50004	PANTHER:PTHR10024
PANTHER:PTHR10024:SF225	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI0004EEA62E	SEG:seg

Description

BnaC09g23830DBnaC09g23830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLV5]

Coordinates

chrLK032033:+:474609..476641

Molecular Weight (calculated)

52213.2 Da

IEP (calculated)

7.951

GRAVY (calculated)

-0.482

Length

462 amino acids

Sequence
(BLAST)

001: MMMSNLKLGV DVIGAHNLFP KDGQGTANAF VELYFDGQKH RTTIKDRDLN PVWNESFFFN ISDPSRLHYL TLEAQAYSHN RPTNGRSFLG KVSLPGTSFV
101: PHSDAVVLHF PMEKRGIFSR VRGELGLKVY ITDEASLKSS ATTHLDNLDP AQPTTMKVEH RSDRRHVFYN LPNNAQEHQQ QQHPQGPNQP SSSAAEPDNH
201: NEHHQHYVPK HQADEMRPEP APPSKLIHAH SIASAQPADF ALKETSPNLG GGRVVGGRVI HKDKTARSTY DLVERMYFLY VRVVKARELP IMDITGSVDP
301: FVEVKVGNYK GITRHFEKRQ HPEWNQVFAF AKERMQASVL EVVVKDKDLL KDDYVGFVRF DINDIPLRVP PDSPLAPQWY RLEDKKGEKI KGELMLAVWI
401: GTQADEAFSD AWHSDAAMPV DCTPAISAVL RSKVRKPQNY IFLLTLLFCI FTNVDILVGP GK

Best Arabidopsis Sequence Match ( AT4G00700.1 )
(BLAST)

0001: MSNIKLGVEV ISAQGLLQRD KHNSCSPFVE LKFDNQIFRA TTKHNDPNPV WHECFYFVVS DPSVLSTRTL EAHVYSYQNE FDAKPFLGKV RVNGTSFVPR
0101: SEAAPFNYPL EKRSVFSRAR GELCLRVFIT DDPSVTPSVP TPVPESPQAY SPSPRKEHVK SLITADASMA TDERRELKPK TRTFHNSAPL VKQQPMMNYG
0201: IHEMRAAPMP PRVVQVNGPG PSLHQLPPDF SVKETSPLLG GGRIVGGRVV RGTERPTSGT YDLVEEMKFL YVRVVKARDL PNKDLTGSLD PYVVVKIGNF
0301: KGVTTHFNKN TDPEWNQVFA FAKDNLQSNF LEVMVKDKDI LLDDFVGIVK FDLREVQSRV PPDSPLAPQW YRLENKRGEK KNYEIMLAVW SGTQADEAFG
0401: DATFSDSLVD SDSSNIISAN LRSKVYHSPR LWYLRVQILE AQDVIIVSDK SRVPEVFVRV KVGNQMLRTK FPQRSNNPKW GDEFTFVVAE PFEDNLVLSV
0501: EDHTAPNRDE PVGKAVILMN DIEKRIDDKP FHDRWVHLED SISDAMDVDK AKKVKFATRL RYKAVLDGGY HVFDESMYNS SDLRPSSRKL WKPAIGVLEL
0601: GILNANVFHS MKTREGKGTS DTYVVAKYGH KWVRSRTVIN SMNPKYNEQY TWEVFDPATV LTICVFDNAH FAAGDGGNKR DQPIGKVRIR LSTLQTGRVY
0701: THAYPLLVLQ PTGLKKRGEL HLAVRFTCTS VSSMLMKYTK PLLPKMHYIL PLSTNQQEAL KMQAINIIIV RLGRSEPPLR REVVDYLTDW KSQLFSMRRS
0801: KANFNRFTTV FSGALSVWKW MEQVCTWKTP VTTALVHVLY TMLVTFPEMI LPTVFLYMAV IGMWNYRFKP RFPPHMDAKL SYADNVNSDE LDEEFDTFPT
0901: VRAPDIVKMR YDRLRSVAGK VQSVAGDIAA QGERVQALLS WRDPRATAIF VTFCFIIAMA LYITPFKLVA LLSGYYFMRH PKLRHRIPSA PVNFFRRLPA
1001: MTDSML

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXU9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.