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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008528.1-P Field mustard cytosol 99.1 99.1
CDY01973 Canola cytosol 97.49 97.88
CDX91899 Canola cytosol 89.05 90.59
CDX74344 Canola cytosol 88.54 90.54
AT4G00700.1 Thale cress cytosol 82.21 81.31
GSMUA_AchrUn_... Banana cytosol 37.79 64.05
KRH65054 Soybean endoplasmic reticulum, peroxisome, plasma membrane 15.68 62.9
CDX81020 Canola cytosol 25.13 62.66
GSMUA_Achr1P00330_001 Banana cytosol 28.24 62.03
CDX98254 Canola cytosol 48.14 61.89
CDY69710 Canola cytosol 48.44 61.87
CDX67712 Canola cytosol 47.84 61.5
VIT_15s0046g03030.t01 Wine grape cytosol 61.91 60.51
CDX78498 Canola cytosol 46.73 60.47
CDX97214 Canola cytosol 46.73 60.47
CDX70485 Canola cytosol 46.53 60.21
CDY68091 Canola cytosol 46.43 60.08
Solyc01g094410.2.1 Tomato nucleus 60.4 59.56
CDY42494 Canola cytosol, plasma membrane 25.13 59.52
PGSC0003DMT400000108 Potato cytosol 60.3 59.46
CDY47660 Canola endoplasmic reticulum 49.45 59.42
KRH65087 Soybean endoplasmic reticulum, mitochondrion, nucleus 59.3 58.82
KRH48167 Soybean endoplasmic reticulum, nucleus 59.1 58.68
CDX86768 Canola cytosol 59.2 58.32
CDX98964 Canola endoplasmic reticulum, extracellular 8.04 56.74
KRH40482 Soybean cytosol 57.89 56.69
CDX71747 Canola cytosol 43.02 56.39
EER99386 Sorghum cytosol 56.98 56.36
CDY70344 Canola cytosol 28.44 56.15
Zm00001d006371_P001 Maize cytosol 56.88 55.93
Zm00001d021494_P001 Maize cytosol 57.29 55.66
KRH00708 Soybean cytosol 56.68 55.46
Os07t0483500-01 Rice cytosol 56.28 55.39
CDX80994 Canola cytosol 5.53 53.4
TraesCS2D01G234800.1 Wheat cytosol 55.58 53.38
TraesCS2B01G261000.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.78 53.26
CDX89108 Canola cytosol 49.05 53.1
HORVU4Hr1G079830.2 Barley plasma membrane 55.98 53.1
TraesCS2A01G238900.1 Wheat cytosol 55.68 52.17
CDY48929 Canola cytosol 51.16 51.62
CDY04800 Canola cytosol 51.56 50.94
CDY21373 Canola cytosol 51.56 50.59
CDX81021 Canola cytosol 14.27 49.48
CDY13273 Canola cytosol 22.61 48.7
CDY10076 Canola cytosol, nucleus, plasma membrane 47.54 48.51
CDX86328 Canola cytosol 49.45 48.28
CDY32530 Canola cytosol 47.84 48.13
CDY13087 Canola cytosol 21.91 47.6
CDY57334 Canola cytosol 20.6 46.38
CDY49185 Canola cytosol 15.28 45.24
CDX71748 Canola cytosol 7.64 41.99
CDX85853 Canola cytosol 43.02 41.0
CDX68168 Canola cytosol 42.91 40.86
CDY21171 Canola cytosol 41.71 40.81
CDY29951 Canola cytosol 41.81 40.74
CDY33906 Canola nucleus 9.55 39.42
CDY38472 Canola cytosol 39.5 39.18
CDY25472 Canola cytosol 39.2 38.96
GSMUA_Achr3P03790_001 Banana cytosol 5.13 38.93
CDY35343 Canola golgi 10.85 38.57
CDX80993 Canola extracellular 3.42 38.2
CDY35342 Canola cytosol, peroxisome, plasma membrane 17.49 35.8
CDX77002 Canola cytosol, peroxisome, plasma membrane 21.21 35.64
CDX71710 Canola cytosol 26.33 34.34
CDY11377 Canola cytosol 27.24 33.71
Protein Annotations
Gene3D:2.60.40.150MapMan:35.1GO:A0A078IVP3UniProt:A0A078IVP3InterPro:C2_domInterPro:C2_domain_sf
EnsemblPlants:CDY54062ProteinID:CDY54062ProteinID:CDY54062.1GO:GO:0005575GO:GO:0016020GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00012060001InterPro:IPR000008InterPro:IPR035892PFAM:PF00168PFAM:PF08372InterPro:PRibTrfase_C
PFscan:PS50004PANTHER:PTHR10024PANTHER:PTHR10024:SF219SMART:SM00239SUPFAM:SSF49562TMHMM:TMhelix
UniParc:UPI0004EE9557SEG:seg::::
Description
BnaA02g36480DBnaA02g36480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IVP3]
Coordinates
chrLK033271:+:48010..51189
Molecular Weight (calculated)
113865.0 Da
IEP (calculated)
9.598
GRAVY (calculated)
-0.304
Length
995 amino acids
Sequence
(BLAST)
001: MSNIKLGVEV ISAHGLFQRD KQNSCSPFVE LKFDNQIFRT TTKPNDPNPV WHESFYFLVS DPSFLSTRTL EAHVFSYQDE TDAKPFLGKV RVNGTSFVPR
101: SEAAPFNYPL EKRSVFSRAR GELGLRVFIT DDPFITPSVS ESPRVYIPSP RREPVSSLIT DDADERRELK KPITRTFYNA TPSVNQQQPA TMNYGMHEMR
201: AAAPMPPRVV QYNGPTPPLD FSVKETSPFL GGGQIIGGRV VRGTKRPASG AYDLVEEMRF LFVRVVKARD LPDRDLTGSL DPYVEVKIGN FKGVTRHLDK
301: NSDPEWNQVF AFAKENLQSN VLEIVVKDKD LVLDDYVGTV RFDLHEVQSR VPPDSPLAPE WYRLENKRQE KKKRAEIMLA VWEGTQADEA FGDAVFSDSL
401: TSSDSSEIIS ANLRSKVYHS PRLWYLRVRI IEAQDVIIVS DKSRLPEAFV RIQMGNQMLK TRVSQRTFHP TWDQEFMFVV AEPFEENLVL SVEDHSEPNR
501: DEPVGKAVIP LAAIEKRTDD KKFRSRWFHL EDSISDAMDE DKAKKVKFAT RIHVAAALEG GYHVFDESTY YSSDLRPTAK PLWKPPIGVL ELGILNANGL
601: HPVKTRDGKG VSDTYVVAKY GHKWVRSRTV INSLSPKYNE QYTWEVFDPA TVLTICVFDN GHFGEGKNRD QTIGKVRIRL STLQSGRVYT NAYPLLVLQP
701: SGLKKRGELH LAVRFTCTSV SNMLMKYTKP LLPKMHYTQP LSVNLQEVLR VQALNIMVAR LGRSEPPLRR EVVEYMTDAK THLFSMRRSK ANFYRFTAVF
801: SGVMSVWKWM GEVCSWRTPV TTALVHVLYT MLVMFPEMIL PTVFLYMAVI GLWNYRFRPR FPPHMDTKLS YAESVNADEL DEEFDIFPTM KAPDIVKMRY
901: DRLRIVAGKI QSVVGDIAAQ GERVQALLSW RDPRATAIFV TFCLIIAMVM YITPFKLFAL LSGYYFMRHP RLRHRIPSAP LNFFRRLPAM TDSML
Best Arabidopsis Sequence Match ( AT4G00700.2 )
(BLAST)
0001: MSNIKLGVEV ISAQGLLQRD KHNSCSPFVE LKFDNQIFRA TTKHNDPNPV WHECFYFVVS DPSVLSTRTL EAHVYSYQNE FDAKPFLGKV RVNGTSFVPR
0101: SEAAPFNYPL EKRSVFSRAR GELCLRVFIT DDPSVTPSVP TPVPESPQAY SPSPRKEHVK SLITADASMA TDERRELKPK TRTFHNSAPL VKQQPMMNYG
0201: IHEMRAAPMP PRVVQVNGPG PSLHQLPPDF SVKETSPLLG GGRIVGGRVV RGTERPTSGT YDLVEEMKFL YVRVVKARDL PNKDLTGSLD PYVVVKIGNF
0301: KGVTTHFNKN TDPEWNQVFA FAKDNLQSNF LEVMVKDKDI LLDDFVGIVK FDLREVQSRV PPDSPLAPQW YRLENKRGEK KNYEIMLAVW SGTQADEAFG
0401: DATFSDSLVD SDSSNIISAN LRSKVYHSPR LWYLRVQILE AQDVIIVSDK SRVPEVFVRV KVGNQMLRTK FPQRSNNPKW GDEFTFVVAE PFEDNLVLSV
0501: EDHTAPNRDE PVGKAVILMN DIEKRIDDKP FHDRWVHLED SISDAMDVDK AKKVKFATRL RYKAVLDGGY HVFDESMYNS SDLRPSSRKL WKPAIGVLEL
0601: GILNANVFHS MKTREGKGTS DTYVVAKYGH KWVRSRTVIN SMNPKYNEQY TWEVFDPATV LTICVFDNAH FAAGDGGNKR DQPIGKVRIR LSTLQTGRVY
0701: THAYPLLVLQ PTGLKKRGEL HLAVRFTCTS VSSMLMKYTK PLLPKMHYIL PLSTNQQEAL KMQAINIIIV RLGRSEPPLR REVVDYLTDW KSQLFSMRRS
0801: KANFNRFTTV FSGALSVWKW MEQVCTWKTP VTTALVHVLY TMLVTFPEMI LPTVFLYMAV IGMWNYRFKP RFPPHMDAKL SYADNVNSDE LDEEFDTFPT
0901: VRAPDIVKMR YDRLRSVAGK VQSVAGDIAA QGERVQALLS WRDPRATAIF VTFCFIIAMA LYITPFKLVA LLSGYYFMRH PKLRHRIPSA PVNFFRRLPA
1001: MTDSML
Arabidopsis Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXU9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.