CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78498	Canola	cytosol	98.31	98.31
AT5G12970.1	Thale cress	cytosol	94.41	94.41
CDX97214	Canola	cytosol	94.02	94.02
CDY68091	Canola	cytosol	93.89	93.89
KRH29670	Soybean	cytosol	83.75	82.88
KRH23178	Soybean	cytosol	81.66	81.03
KRH10160	Soybean	cytosol	80.88	80.36
CDX98254	Canola	cytosol	80.36	79.84
CDX67712	Canola	cytosol	80.36	79.84
CDY69710	Canola	cytosol	80.62	79.59
EER90047	Sorghum	cytosol	78.02	77.42
TraesCS5B01G265100.1	Wheat	cytosol	77.5	77.0
TraesCS5A01G265400.1	Wheat	cytosol	77.5	77.0
Os05t0370600-01	Rice	plastid	77.5	77.0
TraesCS5D01G273300.1	Wheat	cytosol	77.37	76.87
HORVU5Hr1G073350.1	Barley	cytosol	77.37	76.87
Zm00001d036801_P001	Maize	plasma membrane	76.98	76.49
Zm00001d046749_P001	Maize	mitochondrion	76.46	75.87
CDY47660	Canola	endoplasmic reticulum	80.49	74.76
HORVU5Hr1G053320.2	Barley	cytosol	72.3	72.11
TraesCS5B01G171600.1	Wheat	cytosol	72.3	72.11
VIT_06s0004g01550.t01	Wine grape	cytosol, peroxisome, plasma membrane	71.78	72.06
TraesCS5D01G178600.1	Wheat	cytosol	71.91	71.72
PGSC0003DMT400055029	Potato	cytosol	69.83	69.92
CDX81020	Canola	cytosol	36.15	69.67
Solyc01g006620.2.1	Tomato	cytosol	69.44	69.53
TraesCS5A01G174100.1	Wheat	cytosol	66.58	67.1
CDY70344	Canola	cytosol	42.39	64.68
CDX80994	Canola	cytosol	8.06	60.19
CDY33906	Canola	nucleus	18.08	57.68
CDY42494	Canola	cytosol, plasma membrane	31.08	56.9
CDX98964	Canola	endoplasmic reticulum, extracellular	10.4	56.74
CDX71747	Canola	cytosol	55.92	56.65
CDX81021	Canola	cytosol	20.29	54.36
CDY13087	Canola	cytosol	32.12	53.93
CDY57334	Canola	cytosol	29.78	51.81
CDX86768	Canola	cytosol	67.23	51.19
CDY49185	Canola	cytosol	22.24	50.89
CDY04800	Canola	cytosol	65.54	50.05
CDX86328	Canola	cytosol	65.93	49.75
CDY21373	Canola	cytosol	65.41	49.61
CDY10076	Canola	cytosol, nucleus, plasma membrane	59.43	46.87
CDY01973	Canola	cytosol	60.08	46.62
CDY54062	Canola	cytosol	60.21	46.53
CDY32530	Canola	cytosol	59.69	46.41
CDX74344	Canola	cytosol	57.48	45.43
CDX91899	Canola	cytosol	56.96	44.79
CDX89108	Canola	cytosol	53.32	44.61
CDY48929	Canola	cytosol	55.79	43.51
CDX80993	Canola	extracellular	4.55	39.33
CDX85853	Canola	cytosol	52.67	38.79
CDX68168	Canola	cytosol	52.41	38.56
CDY35342	Canola	cytosol, peroxisome, plasma membrane	24.32	38.48
CDY21171	Canola	cytosol	50.85	38.45
CDY29951	Canola	cytosol	50.85	38.3
CDX77002	Canola	cytosol, peroxisome, plasma membrane	29.39	38.18
CDY38472	Canola	cytosol	49.28	37.79
CDY25472	Canola	cytosol	48.89	37.56
CDX71710	Canola	cytosol	36.28	36.57
CDY11377	Canola	cytosol	36.93	35.32
CDY35343	Canola	golgi	12.61	34.64
CDY13273	Canola	cytosol	17.95	29.87
CDX71748	Canola	cytosol	0.52	2.21

Protein Annotations

EnsemblPlants:CDX70485	EnsemblPlantsGene:GSBRNA2T00140313001	Gene3D:2.60.40.150	GO:A0A078C0M3	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	InterPro:PRibTrfase_C	ncoils:Coil	PANTHER:PTHR10024	PANTHER:PTHR10024:SF243
PFAM:PF00168	PFAM:PF08372	PFscan:PS50004	ProteinID:CDX70485	ProteinID:CDX70485.1	SEG:seg
SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI0004EB9BC6	MapMan:35.1	:

Description

BnaC03g05690D

Coordinates

chrLK031791:+:661257..663566

Molecular Weight (calculated)

88505.9 Da

IEP (calculated)

9.601

GRAVY (calculated)

-0.183

Length

769 amino acids

Sequence
(BLAST)

001: MEKPGQNIDF ALKETSPKIG AGAVTGDKLS CTYDLVEQMH YLYVRVVKAK ELSGKDVTGS CDPYVEVKLG NYRGMTKHFE KKSNPEWRQV FAFSKERIQA
101: SILEVIVKDK NVMLDDFIGG IMFDLNEIPK RVPPDSPLAP QWYRLEDRHG RKVKGELMLA VWMGTQADEA FSDAWHSDAA TVGPEGVTNI RSKVYLSPKL
201: WYVRVNVIEA QDLIPHDKTK FPEVYVKAML GNQTLRTRVS QNKTLNPMWN EDLMFVVAEP FEEPLILAVE NRVAPNNDET LGRCAIPLQS VQRRLDHRPL
301: HSRWFNLEKH IMVDGEKKEI KFASRIHLRI FLEGGYHVLD ESTHYSSDLR PTAKQLWKPS IGLLEVGIIS AHGLMPMKTK DGKGTTDAYC VAKYGQKWIR
401: TRTIVDSLMP KWNEQYTWEV FDTCTVITFG AFDNGHIPGG SGKDTRIGKV RIRLSTLESD RIYTHSYPLL VFHPSGIKKT GEIQLAVRFT CLSVINMLHM
501: YSQPLLPKMH YIHPLSVLQL DSLRYQAMNI VSARLNRAEP PLRKEVVEYM LDVDSHMWSM RRSKANFFRI MNVLSGLVAV TKWFDQICHW RNPITTVLIH
601: VLFVILVLYP ELILPTVFLY LFLIGIWNFR WRPRHPPHMD TRLSHADAVH PDELDEEFDT FPTSRSPAIV RMRYDRLRSI GGRVQTVIGD LATQGERFLS
701: LLSWRDPRAT TLFLFFCLIA AVVLYVTPFQ VVALLTGIYL LRHPRFRHKL PSVPLNLFRR LPARSDSLI

Best Arabidopsis Sequence Match ( AT5G12970.1 )
(BLAST)

001: MQKPGQNIDF ALKETSPKIG AGSVTGDKLC STYDLVEQMH YLYVRVVKAK ELPGKDVTGS CDPYVEVKLG NYRGMTKHFE KRSNPEWKQV FAFSKERIQA
101: SILEVVVKDK DVVLDDLIGR IMFDLNEIPK RVPPDSPLAP QWYRLEDRHG RKVKGELMLA VWMGTQADEA FSDAWHSDAA TVGPEGVTHI RSKVYLSPKL
201: WYVRVNVIEA QDLIPHDKTK FPEVYVKAML GNQTLRTRIS QTKTLNPMWN EDLMFVVAEP FEEALILAVE DRVAPNKDET LGRCAIPLQN VQRRLDHRPL
301: NSRWFNLEKH IMVEGEQKEI KFASRIHLRI FLEGGYHVLD ESTHYSSDLR PTAKQLWKPS IGLLEVGIIS AHGLMPMKSK DGKGTTDAYC VAKYGQKWIR
401: TRTIVDSFTP KWNEQYTWEV FDTCTVITFG AFDNGHIPGG SGKDLRIGKV RIRLSTLEAD RIYTHSYPLL VFHPSGIKKT GEIQLAVRFT CLSLINMLHM
501: YSQPLLPKMH YIHPLSVLQL DSLRHQAMNI VSARLNRAEP PLRKEIVEYM LDVDSHMWSM RRSKANFFRI MNVLSGLIAV GKWFDQICNW RNPITTILIH
601: VLFIILVLYP ELILPTVFLY LFLIGIWNFR WRPRHPPHMD TRLSHADAVH PDELDEEFDT FPTSRSSEIV RMRYDRLRSI GGRVQTVIGD LATQGERFLS
701: LLSWRDPRAT TLFVLFCLIA AIVLYVTPFQ VVALLAGIYV LRHPRFRHKL PSVPLNLFRR LPARSDSLL

Arabidopsis Description

Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LXU2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.