Factsheet for HORVU5Hr1G053320.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G171600.1	Wheat	cytosol	96.89	96.89
TraesCS5D01G178600.1	Wheat	cytosol	96.89	96.89
TraesCS5A01G174100.1	Wheat	cytosol	88.72	89.65
HORVU5Hr1G073350.1	Barley	cytosol	79.51	79.2
Solyc10g080420.1.1	Tomato	nucleus	54.6	77.53
AT3G57880.3	Thale cress	cytosol	77.56	77.36
CDY69710	Canola	cytosol	78.08	77.28
Bra014601.1-P	Field mustard	cytosol	77.95	77.25
CDX67712	Canola	cytosol	77.3	77.0
Bra003302.1-P	Field mustard	cytosol	77.17	76.87
CDX98254	Canola	cytosol	77.04	76.74
VIT_08s0007g06170.t01	Wine grape	cytosol	77.3	76.71
KRG95352	Soybean	endoplasmic reticulum	76.91	76.52
PGSC0003DMT400029745	Potato	cytosol	76.65	76.46
PGSC0003DMT400060959	Potato	cytosol	76.01	76.4
KRH67030	Soybean	endoplasmic reticulum, mitochondrion, nucleus	76.65	76.26
Solyc10g078680.1.1	Tomato	cytosol	74.32	75.99
Solyc10g080430.1.1	Tomato	nucleus	76.26	75.97
GSMUA_Achr1P09320_001	Banana	cytosol	57.46	75.6
AT1G51570.1	Thale cress	cytosol	76.01	75.52
PGSC0003DMT400060862	Potato	cytosol	75.36	75.16
KRH32992	Soybean	cytosol	75.36	75.16
CDY47660	Canola	endoplasmic reticulum	78.21	72.83
AT5G12970.1	Thale cress	cytosol	72.63	72.82
CDY68091	Canola	cytosol	72.5	72.69
CDX97214	Canola	cytosol	72.37	72.56
CDX78498	Canola	cytosol	72.37	72.56
Bra006172.1-P	Field mustard	cytosol	72.37	72.56
CDX70485	Canola	cytosol	72.11	72.3
Bra008867.1-P	Field mustard	cytosol	72.11	72.3
KRH29670	Soybean	cytosol	72.5	71.94
KRH23178	Soybean	cytosol	71.72	71.35
KRH10160	Soybean	cytosol	70.95	70.67
VIT_06s0004g01550.t01	Wine grape	cytosol, peroxisome, plasma membrane	67.44	67.89
PGSC0003DMT400011904	Potato	cytosol	67.44	67.44
PGSC0003DMT400011903	Potato	cytosol	49.16	67.2
PGSC0003DMT400055029	Potato	cytosol	64.98	65.23
Solyc01g006620.2.1	Tomato	cytosol	64.85	65.1
VIT_13s0064g01400.t01	Wine grape	cytosol	65.37	63.64
Solyc01g086700.2.1	Tomato	cytosol	63.81	61.5
HORVU7Hr1G094580.2	Barley	cytosol	64.46	60.91
PGSC0003DMT400087204	Potato	cytosol	63.81	60.59
PGSC0003DMT400013490	Potato	cytosol	40.99	58.63
Solyc02g044030.1.1	Tomato	cytosol, nucleus, unclear	25.68	58.41
HORVU1Hr1G075050.2	Barley	mitochondrion	58.24	55.78
Bra027570.1-P	Field mustard	cytosol	54.47	55.26
KRH48448	Soybean	cytosol	50.71	55.23
KRH39245	Soybean	cytosol	52.66	54.13
AT4G20080.1	Thale cress	cytosol	53.96	53.75
HORVU1Hr1G001710.1	Barley	mitochondrion	56.68	53.42
CDY49185	Canola	cytosol	23.09	52.98
HORVU6Hr1G063800.1	Barley	cytosol	52.01	51.61
CDY13087	Canola	cytosol	30.61	51.53
HORVU2Hr1G123760.1	Barley	cytosol	66.15	50.2
KRH43466	Soybean	plasma membrane	14.27	48.89
AT5G44760.1	Thale cress	cytosol	30.22	48.74
CDY57334	Canola	cytosol	27.76	48.42
KRH15602	Soybean	plasma membrane	44.36	44.13
HORVU4Hr1G079830.2	Barley	plasma membrane	59.66	43.85
HORVU6Hr1G090200.1	Barley	cytosol	57.59	43.74
HORVU6Hr1G090330.2	Barley	cytosol	57.59	43.74
HORVU2Hr1G126730.1	Barley	cytosol, nucleus, plasma membrane	58.24	43.05
HORVU7Hr1G110440.4	Barley	cytosol, plastid	52.01	37.03
HORVU4Hr1G002160.1	Barley	plastid	50.19	34.68
HORVU2Hr1G082010.3	Barley	cytosol	26.2	21.06
HORVU2Hr1G123810.1	Barley	cytosol	1.04	3.79
HORVU7Hr1G109210.1	Barley	plastid	1.04	3.19

Protein Annotations

EnsemblPlants:HORVU5Hr1G053320.2	EnsemblPlantsGene:HORVU5Hr1G053320	Gene3D:2.60.40.150	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	InterPro:PRibTrfase_C	PANTHER:PTHR31425
PANTHER:PTHR31425:SF6	PFAM:PF00168	PFAM:PF08372	PFscan:PS50004	SEG:seg	SMART:SM00239
SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI000296A0FD	UniProt:M0V4M6	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr5H:+:417530686..417536730

Molecular Weight (calculated)

88423.0 Da

IEP (calculated)

9.330

GRAVY (calculated)

-0.303

Length

771 amino acids

Sequence
(BLAST)

001: MQPPQPRPED YSLKETTPHL GGFMAAGDKR RSTYDLVEQM PYLYVRAVKA KELHAKDGTG SCNPSVEIKL GNYRCTTRQF EKNANPEWNQ VFAFPKERIQ
101: SSYIEVTVKD KDDFIGRVIF DLNEVPKRVP PDSPLAPEWY RLEGRKEGKV GELMLAVWMG SQADEAFPEA WHADAATVPS DGLASIRSKV YLTPKLWYLR
201: VNVIEAQDLV PSDKCRYPEV YVKATLGNQS LRTRISASKS VNPMWNEDLM FVAAEPFEEH LILSVEDRIA PNKDEVLGKA CIQLQNVDRR PDHRPVHSRW
301: CNLEKHVAGD GEQKKKDVKF SSRIHLRISL DGGYHVLDES AHYSSDLRAT EKQLWRPSIG VLELGILNAQ GLLAMKTKDG HGTTDSYCVA KYGHKWVRTR
401: TIIDSFNPKW NEQYTWDVYD PCTVITVGVF DNCHLQGEKS KGNKDSRIGK VRVRLSTLES GRVYTHSYPL IILLPTGVKK MGEVQLAVRF TCSSLVNMMQ
501: LYSQPLLPKM HYVYPLSVTQ LDVLRLQATH MVSTKLSRAE PPLRKEVVEY MLDVDSHMWS MRKSKANFFR IMKVLAPLVG AAQWFDKICE WKNPLTTVLI
601: HLLFIILVVF PELILPTVFL YLFLIGVWFY RWRPRQPPHM DTRLSHAETS NPDEFDEEFD TFPTSRAQDV VRMRYDRLRS IAGRVQTVVG DLATQGERLQ
701: SLLNWRDPRA TAIFVSFCLI AGVVLYLAPF RMVVLIAGLY VLRHPRFRRH GLPSAPLNFF RRLPAKTDSL L

Best Arabidopsis Sequence Match ( AT1G51570.1 )
(BLAST)

001: MQRPPPEDFS LKETKPHLGG GKVTGDKLTT TYDLVEQMQY LYVRVVKAKE LPGKDLTGSC DPYVEVKLGN YRGTTRHFEK KSNPEWNQVF AFSKDRVQAS
101: YLEATVKDKD LVKDDLIGRV VFDLNEIPKR VPPDSPLAPQ WYRLEDGKGQ KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPSDKGR YPEVFVKVIM GNQALRTRVS QSRSINPMWN EDLMFVVAEP FEEPLILSVE DRVAPNKDEV LGRCAVPLQY LDKRFDYRPV
301: NSRWFNLEKH VIMEGGEKKE IKFASKIHMR ICLEGGYHVL DESTHYSSDL RPTAKQLWKP NIGVLELGVL NATGLMPMKA KEGGRGTTDA YCVAKYGQKW
401: IRTRTIIDSF TPRWNEQYTW EVFDPCTVVT VGVFDNCHLH GGDKNNGGGK DSRIGKVRIR LSTLEADRVY THSYPLLVLH PSGVKKMGEI HLAVRFTCSS
501: LLNMMYMYSM PLLPKMHYLH PLTVSQLDNL RHQATQIVST RLTRAEPPLR KEVVEYMLDV GSHMWSMRRS KANFFRIMGV LSGIIAVGKW FEQICVWKNP
601: ITTVLIHILF IILVIYPELI LPTIFLYLFL IGVWYYRWRP RHPPHMDTRL SHADSAHPDE LDEEFDTFPT SRPSDIVRMR YDRLRSIAGR IQTVVGDLAT
701: QGERFQSLLS WRDPRATALF VLFCLIAAVI LYITPFQVVA FAIGLYVLRH PRLRYKLPSV PLNFFRRLPA RTDCML

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8H3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.