Factsheet for Bra006172.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78498	Canola	cytosol	99.74	99.74
AT5G12970.1	Thale cress	cytosol	95.45	95.45
Bra008867.1-P	Field mustard	cytosol	95.06	95.06
KRH29670	Soybean	cytosol	84.4	83.53
KRH23178	Soybean	cytosol	82.05	81.42
KRH10160	Soybean	cytosol	81.53	81.01
Bra003302.1-P	Field mustard	cytosol	81.01	80.49
Bra014601.1-P	Field mustard	cytosol	81.14	80.21
EER90047	Sorghum	cytosol	78.41	77.81
TraesCS5A01G265400.1	Wheat	cytosol	77.63	77.13
Os05t0370600-01	Rice	plastid	77.63	77.13
TraesCS5B01G265100.1	Wheat	cytosol	77.63	77.13
TraesCS5D01G273300.1	Wheat	cytosol	77.5	77.0
Zm00001d036801_P001	Maize	plasma membrane	77.5	77.0
HORVU5Hr1G073350.1	Barley	cytosol	77.5	77.0
Zm00001d046749_P001	Maize	mitochondrion	76.72	76.13
VIT_06s0004g01550.t01	Wine grape	cytosol, peroxisome, plasma membrane	72.3	72.58
TraesCS5B01G171600.1	Wheat	cytosol	72.56	72.37
HORVU5Hr1G053320.2	Barley	cytosol	72.56	72.37
TraesCS5D01G178600.1	Wheat	cytosol	72.17	71.98
PGSC0003DMT400055029	Potato	cytosol	69.96	70.05
Solyc01g006620.2.1	Tomato	cytosol	69.83	69.92
TraesCS5A01G174100.1	Wheat	cytosol	66.71	67.23
Bra005915.1-P	Field mustard	cytosol	66.32	64.31
Bra027570.1-P	Field mustard	cytosol	56.44	57.11
Bra020640.1-P	Field mustard	cytosol	18.73	56.03
Bra036444.1-P	Field mustard	plasma membrane	20.68	54.64
Bra035212.1-P	Field mustard	cytosol	67.75	51.48
Bra024523.1-P	Field mustard	cytosol	65.8	49.8
Bra037512.1-P	Field mustard	cytosol	66.97	48.4
Bra008528.1-P	Field mustard	cytosol	60.47	46.73
Bra032527.1-P	Field mustard	cytosol	59.04	46.09
Bra000963.1-P	Field mustard	cytosol	57.61	45.58
Bra007594.1-P	Field mustard	cytosol	56.44	43.66
Bra034266.1-P	Field mustard	cytosol	36.02	38.69
Bra003788.1-P	Field mustard	cytosol	52.41	38.45
Bra036443.1-P	Field mustard	cytosol	50.85	38.22
Bra002118.1-P	Field mustard	cytosol	48.76	35.71
Bra007628.1-P	Field mustard	cytosol	37.32	35.7
Bra014445.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	53.58	28.43
Bra024522.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	EnsemblPlantsGene:Bra006172	EnsemblPlants:Bra006172.1	EnsemblPlants:Bra006172.1-P	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892
UniProt:M4CPN3	PFAM:PF00168	PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR10024
PANTHER:PTHR10024:SF243	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI000253FA41	SEG:seg

Description

AT5G12970 (E=0.0) | C2 domain-containing protein

Coordinates

chrA03:+:2342126..2344435

Molecular Weight (calculated)

88597.1 Da

IEP (calculated)

9.559

GRAVY (calculated)

-0.192

Length

769 amino acids

Sequence
(BLAST)

001: MQKPGQNIDF ALKETSPKIG AGAVTGDKLS CTYDLVEQMH YLYVRVVKAK ELPGKDVTGS CDPYVEVKLG NYRGMTKHFE KKSNPEWRQV FAFSKERIQA
101: SILEVIVKDK DVMLDDFIGG IMFDLNEIPK RVPPDSPLAP QWYRLEDRHG RKVKGELMLA VWMGTQADEA FSDAWHSDAA TVGPEGVTNI RSKVYLSPKL
201: WYVRVNVIEA QDLIPHDKTK FPEVYVKAML GNQTLRTRIS QNRTLNPMWN EDLMFVVAEP FEEPLILAVE NRVAPNNDET LGRCGIPLQS VQRRLDHRPL
301: HSRWFNLEKH IMVDGEKKEI KFASRIHLRI FLEGGYHVLD ESTHYSSDLR PTAKQLWKPS IGLLEVGIIS AHGLMPMKTK DGKGTTDAYC VAKYGQKWIR
401: TRTIVDSLMP KWNEQYTWEV FDTCTVITFG AFDNGHIPGG SGKDMRIGKV RIRLSTLESD RIYTHSYPLL VFHPSGIKKT GEIQLAVRFT CLSVINMLHM
501: YSQPLLPKMH YIHPLSVLQL DSLRHQAMNI VSARLNRAEP PLRKEVVEYM LDVDSHMWSM RRSKANFFRI MNVLSGLVAV TKWFDQICNW RNPITTILIH
601: VLFIILVLYP ELILPTVFLY LFLIGIWNFR WRPRHPPHMD TRLSHADAVH PDELDEEFDT FPTSRSPEIV RMRYDRLRSI GGRVQTVIGD LATQGERFLS
701: LLSWRDPRAT TLFLFFCLIA AVVLYVTPFQ VVALLTGIYV LRHPRFRHKL PSVPLNLFRR LPARSDSLI

Best Arabidopsis Sequence Match ( AT5G12970.1 )
(BLAST)

001: MQKPGQNIDF ALKETSPKIG AGSVTGDKLC STYDLVEQMH YLYVRVVKAK ELPGKDVTGS CDPYVEVKLG NYRGMTKHFE KRSNPEWKQV FAFSKERIQA
101: SILEVVVKDK DVVLDDLIGR IMFDLNEIPK RVPPDSPLAP QWYRLEDRHG RKVKGELMLA VWMGTQADEA FSDAWHSDAA TVGPEGVTHI RSKVYLSPKL
201: WYVRVNVIEA QDLIPHDKTK FPEVYVKAML GNQTLRTRIS QTKTLNPMWN EDLMFVVAEP FEEALILAVE DRVAPNKDET LGRCAIPLQN VQRRLDHRPL
301: NSRWFNLEKH IMVEGEQKEI KFASRIHLRI FLEGGYHVLD ESTHYSSDLR PTAKQLWKPS IGLLEVGIIS AHGLMPMKSK DGKGTTDAYC VAKYGQKWIR
401: TRTIVDSFTP KWNEQYTWEV FDTCTVITFG AFDNGHIPGG SGKDLRIGKV RIRLSTLEAD RIYTHSYPLL VFHPSGIKKT GEIQLAVRFT CLSLINMLHM
501: YSQPLLPKMH YIHPLSVLQL DSLRHQAMNI VSARLNRAEP PLRKEIVEYM LDVDSHMWSM RRSKANFFRI MNVLSGLIAV GKWFDQICNW RNPITTILIH
601: VLFIILVLYP ELILPTVFLY LFLIGIWNFR WRPRHPPHMD TRLSHADAVH PDELDEEFDT FPTSRSSEIV RMRYDRLRSI GGRVQTVIGD LATQGERFLS
701: LLSWRDPRAT TLFVLFCLIA AIVLYVTPFQ VVALLAGIYV LRHPRFRHKL PSVPLNLFRR LPARSDSLL

Arabidopsis Description

Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LXU2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.