Factsheet for Bra020640.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33906	Canola	nucleus	91.05	97.1
Bra014601.1-P	Field mustard	cytosol	68.87	22.75
Bra003302.1-P	Field mustard	cytosol	65.76	21.83
Bra008867.1-P	Field mustard	cytosol	56.42	18.86
Bra006172.1-P	Field mustard	cytosol	56.03	18.73
Bra005915.1-P	Field mustard	cytosol	43.58	14.12
Bra027570.1-P	Field mustard	cytosol	38.13	12.89
Bra037512.1-P	Field mustard	cytosol	46.3	11.18
Bra035212.1-P	Field mustard	cytosol	41.25	10.47
Bra024523.1-P	Field mustard	cytosol	40.86	10.33
Bra032527.1-P	Field mustard	cytosol	38.91	10.15
Bra008528.1-P	Field mustard	cytosol	38.52	9.95
Bra000963.1-P	Field mustard	cytosol	36.19	9.57
Bra034266.1-P	Field mustard	cytosol	25.68	9.22
Os07t0165100-01	Rice	cytosol, endoplasmic reticulum, peroxisome	29.18	9.17
Bra007594.1-P	Field mustard	cytosol	34.63	8.95
Bra003788.1-P	Field mustard	cytosol	33.85	8.3
Bra036443.1-P	Field mustard	cytosol	31.52	7.92
Bra002118.1-P	Field mustard	cytosol	29.57	7.24
TraesCS5D01G484400.1	Wheat	cytosol	29.18	7.23
Bra007628.1-P	Field mustard	cytosol	22.57	7.21
TraesCS5A01G471900.1	Wheat	cytosol	28.79	7.13
Zm00001d018871_P001	Maize	cytosol	29.57	7.1
TraesCS5B01G484400.1	Wheat	cytosol	28.4	7.06
OQU88487	Sorghum	cytosol	29.18	6.95
GSMUA_Achr9P10500_001	Banana	cytosol	17.12	6.81
Bra014445.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	31.52	5.59
Bra036444.1-P	Field mustard	plasma membrane	0.39	0.34
Bra024522.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.60.40.150	Gene3D:3.30.70.330	MapMan:35.1	EnsemblPlantsGene:Bra020640	EnsemblPlants:Bra020640.1	EnsemblPlants:Bra020640.1-P
InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	InterPro:IPR000008
InterPro:IPR012677	InterPro:IPR035892	UniProt:M4DVU6	InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00168	PFscan:PS50004
PANTHER:PTHR10024	PANTHER:PTHR10024:SF243	InterPro:RBD_domain_sf	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF54928
UniParc:UPI00025466F4	SEG:seg	:	:	:	:

Description

AT3G57880 (E=3e-088) | C2 domain-containing protein

Coordinates

chrA02:-:24016956..24018127

Molecular Weight (calculated)

28800.4 Da

IEP (calculated)

8.675

GRAVY (calculated)

-0.528

Length

257 amino acids

Sequence
(BLAST)

001: MMRDVIDEMN GKELDGRTIT VNESQSRGSG GGGGRGGGGR GGGGYSGRGG GDGQSTLISL ERSMANPSDS YLHMAWHSDA ATVSGTDALA NIRSKVYLSP
101: KLWYLRVNVI EAQDLIPSDK GRYPEVYVKA IVGNQALRTR VSQSRTINPM WNKDLMFVAA EPFEEPLILS VEDRVAPNKD EVLGRCAIPL QHLDRRFDHR
201: PVNSRWFNLE KHIMVDGEKK EIKFTSRIHM RICLEEGDQV REHTQHLHQF FIKLVKL

Best Arabidopsis Sequence Match ( AT1G51570.1 )
(BLAST)

001: MQRPPPEDFS LKETKPHLGG GKVTGDKLTT TYDLVEQMQY LYVRVVKAKE LPGKDLTGSC DPYVEVKLGN YRGTTRHFEK KSNPEWNQVF AFSKDRVQAS
101: YLEATVKDKD LVKDDLIGRV VFDLNEIPKR VPPDSPLAPQ WYRLEDGKGQ KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPSDKGR YPEVFVKVIM GNQALRTRVS QSRSINPMWN EDLMFVVAEP FEEPLILSVE DRVAPNKDEV LGRCAVPLQY LDKRFDYRPV
301: NSRWFNLEKH VIMEGGEKKE IKFASKIHMR ICLEGGYHVL DESTHYSSDL RPTAKQLWKP NIGVLELGVL NATGLMPMKA KEGGRGTTDA YCVAKYGQKW
401: IRTRTIIDSF TPRWNEQYTW EVFDPCTVVT VGVFDNCHLH GGDKNNGGGK DSRIGKVRIR LSTLEADRVY THSYPLLVLH PSGVKKMGEI HLAVRFTCSS
501: LLNMMYMYSM PLLPKMHYLH PLTVSQLDNL RHQATQIVST RLTRAEPPLR KEVVEYMLDV GSHMWSMRRS KANFFRIMGV LSGIIAVGKW FEQICVWKNP
601: ITTVLIHILF IILVIYPELI LPTIFLYLFL IGVWYYRWRP RHPPHMDTRL SHADSAHPDE LDEEFDTFPT SRPSDIVRMR YDRLRSIAGR IQTVVGDLAT
701: QGERFQSLLS WRDPRATALF VLFCLIAAVI LYITPFQVVA FAIGLYVLRH PRLRYKLPSV PLNFFRRLPA RTDCML

Arabidopsis Description

Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8H3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.