Factsheet for Bra024522.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024523.1-P	Field mustard	cytosol	100.0	21.16
HORVU7Hr1G109210.1	Barley	plastid	22.79	19.52
HORVU2Hr1G123810.1	Barley	cytosol	18.6	18.96
Bra032527.1-P	Field mustard	cytosol	32.56	7.11
Bra036443.1-P	Field mustard	cytosol	32.56	6.84
Bra037512.1-P	Field mustard	cytosol	31.63	6.39
Bra003788.1-P	Field mustard	cytosol	29.77	6.11
Bra008528.1-P	Field mustard	cytosol	27.91	6.03
Bra000963.1-P	Field mustard	cytosol	26.51	5.86
Bra035212.1-P	Field mustard	cytosol	27.44	5.83
Bra007594.1-P	Field mustard	cytosol	26.51	5.73
Bra002118.1-P	Field mustard	cytosol	27.44	5.62
Bra014445.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	25.58	3.8
Bra034266.1-P	Field mustard	cytosol	0.47	0.14
Bra027570.1-P	Field mustard	cytosol	0.47	0.13
Bra007628.1-P	Field mustard	cytosol	0.47	0.12
Bra036444.1-P	Field mustard	plasma membrane	0.0	0.0
Solyc03g095420.1.1	Tomato	cytosol	0.0	0.0
Bra020640.1-P	Field mustard	cytosol	0.0	0.0
Bra014601.1-P	Field mustard	cytosol	0.0	0.0
Bra008867.1-P	Field mustard	cytosol	0.0	0.0
Bra006172.1-P	Field mustard	cytosol	0.0	0.0
Bra005915.1-P	Field mustard	cytosol	0.0	0.0
Bra003302.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra024522.1	EnsemblPlants:Bra024522.1-P	EnsemblPlantsGene:Bra024522	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	PANTHER:PTHR10024	PANTHER:PTHR10024:SF272	PFAM:PF00168	PFscan:PS50004
SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0002542AEB	UniProt:M4E6W7	MapMan:35.1

Description

AT1G22610 (E=3e-080) | C2 domain-containing protein

Coordinates

chrA09:-:24640956..24641603

Molecular Weight (calculated)

24657.8 Da

IEP (calculated)

5.423

GRAVY (calculated)

-0.898

Length

215 amino acids

Sequence
(BLAST)

001: MSKLVVEIVD ASDLMPKDGQ GSASPFVEVE FDDQRQRTQT RFKDLNPQWN EKLVFNVGDF RRLTNKTIDV TVYDDRRDNQ PGKFLGRVKI SGAVVPLSES
101: EADVQRYPLD KRGLFSHIKG DIALRIYAAP VDGSDFIPPP VEEFAVKETK EEKQFEPQEF HNHNQNPNQN SFEEVYVETM KPKKKEKETR TFHSIGAQQS
201: FEAKPPSHLP PNQPE

Best Arabidopsis Sequence Match ( AT1G22610.1 )
(BLAST)

0001: MNKLVVEIVD ASDLMPKDGQ GSASPFVEVE FDEQRQRTQT RFKDLNPQWN EKLVFNVGDL KRLNNKTVDV TVYDDRRDNQ PGKFLGRVKI AGAVVPLSES
0101: ESGVQRYPLD KRGLFSNIKG DIALRIYAAP IDGGDFVSPP PDFAEKVMKE DKRFESQEFQ FQNQNQNQNH YEQFEDEINN METLKPTKKK EKESRTFHSI
0201: GAHAGGGGGA PPMSQAKQAY PPPPNQPEFR SDFMRAPGPP TGAVMQMQPP RQQNPEFQLI ETSPPLAARM RQSYYYRSSG DKTSSTYDLV EQMHYLYVSV
0301: VKARDLPVMD VSGSLDPYVE VKLGNYKGLT KHLEKNSNPI WKQIFAFSKE RLQSNLLEVT VKDKDLLTKD DFVGRVHIDL TEVPLRVPPD SPLAPQWYRL
0401: EDKKGMKTNR GEIMLAVWMG TQADESFPDA WHSDAHRVSH SNLSNTRSKV YFSPKLYYLR IHVMEAQDLV PSDKGRVPDA IVKIQAGNQM RATRTPQMRT
0501: MNPQWHEELM FVVSEPFEDM VIVSVDDRIG PGKDEILGRV FIPVRDVPVR QEVGKMPDPR WFNLQRHSMS MEEENEKRKE KFSSKILLRV CIEAGYHVLD
0601: ESTHFSSDLQ PSSKHLRKPS IGILELGILS ARNLMPMKGK DGRMTDPYCV AKYGNKWVRT RTLLDALAPK WNEQYTWEVH DPCTVITIGV FDNSHVNDGG
0701: DFKDQRIGKV RVRLSTLETD RVYTHFYPLL VLTPGGLKKN GELQLALRYT CTGFVNMMAQ YGRPLLPKMH YIQPIPVRHI DLLRHQAMQI VATRLSRSEP
0801: PLRREVVEYM LDVDYHMFSL RRSKANFSRI MSLLSSVTLV CKWFNDICTW RNPITTCLVH VLFLILVCYP ELILPTVFLY LFVIGMWNYR YRPRHPPHMD
0901: ARVSQADNAH PDELDEEFDT FPTSRPADIV RMRYDRLRSV GGRVQTVVGD LATQGERIQA LLSWRDPRAT ALFIVFALIW AVFIYVTPFQ VIAIIIGLFM
1001: LRHPRFRSRM PSVPANFFKR LPAKSDMLL

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKA3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.