Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g080420.1.1 | Tomato | nucleus | 68.42 | 7.18 |
| Solyc10g078680.1.1 | Tomato | cytosol | 68.42 | 5.17 |
| Solyc10g080430.1.1 | Tomato | nucleus | 68.42 | 5.04 |
| CDY35342 | Canola | cytosol, peroxisome, plasma membrane | 35.09 | 4.12 |
| Solyc01g006620.2.1 | Tomato | cytosol | 54.39 | 4.04 |
| Solyc03g077920.1.1 | Tomato | cytosol | 52.63 | 3.8 |
| CDX77002 | Canola | cytosol, peroxisome, plasma membrane | 36.84 | 3.55 |
| Solyc01g086700.2.1 | Tomato | cytosol | 49.12 | 3.5 |
| Solyc01g086720.2.1 | Tomato | cytosol | 66.67 | 3.5 |
| Solyc09g064230.1.1 | Tomato | cytosol | 59.65 | 3.37 |
| Solyc01g094410.2.1 | Tomato | nucleus | 57.89 | 3.27 |
| Solyc08g008020.1.1 | Tomato | plastid | 56.14 | 3.2 |
| Solyc11g022400.1.1 | Tomato | nucleus | 52.63 | 3.19 |
| Bra034266.1-P | Field mustard | cytosol | 36.84 | 2.93 |
| AT3G61720.1 | Thale cress | cytosol | 40.35 | 2.89 |
| Solyc03g113190.1.1 | Tomato | cytosol | 50.88 | 2.77 |
| Solyc01g007170.2.1 | Tomato | cytosol | 45.61 | 2.74 |
| AT5G03435.1 | Thale cress | cytosol | 35.09 | 2.68 |
| CDX71710 | Canola | cytosol | 33.33 | 2.49 |
| CDY11377 | Canola | cytosol | 33.33 | 2.36 |
| Bra007628.1-P | Field mustard | cytosol | 33.33 | 2.36 |
| Solyc01g065500.2.1 | Tomato | cytosol | 35.09 | 2.02 |
| Solyc02g044030.1.1 | Tomato | cytosol, nucleus, unclear | 5.26 | 0.88 |
| CDY35343 | Canola | golgi | 1.75 | 0.36 |
| Solyc11g022460.1.1 | Tomato | nucleus | 1.75 | 0.14 |
| HORVU7Hr1G109210.1 | Barley | plastid | 0.0 | 0.0 |
| HORVU2Hr1G123810.1 | Barley | cytosol | 0.0 | 0.0 |
| Bra024522.1-P | Field mustard | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc03g095420.1.1 | EnsemblPlantsGene:Solyc03g095420.1 | InterPro:PRibTrfase_C | PANTHER:PTHR31425 | PANTHER:PTHR31425:SF4 | PFAM:PF08372 |
| UniParc:UPI0002767844 | UniProt:K4BIW6 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3:-:56541704..56541877
Molecular Weight (calculated)
6366.4 Da
IEP (calculated)
3.925
GRAVY (calculated)
-0.132
Length
57 amino acids
Sequence
(BLAST)
(BLAST)
1: MHPALTDTCL SCADTALPDE LSEEYDGFPT SFSHDIVSMR YDRLRMIAAT IQTVVDD
001: MQRPPPEDFS LKETKPHLGG GKVTGDKLTT TYDLVEQMQY LYVRVVKAKE LPGKDLTGSC DPYVEVKLGN YRGTTRHFEK KSNPEWNQVF AFSKDRVQAS
101: YLEATVKDKD LVKDDLIGRV VFDLNEIPKR VPPDSPLAPQ WYRLEDGKGQ KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPSDKGR YPEVFVKVIM GNQALRTRVS QSRSINPMWN EDLMFVVAEP FEEPLILSVE DRVAPNKDEV LGRCAVPLQY LDKRFDYRPV
301: NSRWFNLEKH VIMEGGEKKE IKFASKIHMR ICLEGGYHVL DESTHYSSDL RPTAKQLWKP NIGVLELGVL NATGLMPMKA KEGGRGTTDA YCVAKYGQKW
401: IRTRTIIDSF TPRWNEQYTW EVFDPCTVVT VGVFDNCHLH GGDKNNGGGK DSRIGKVRIR LSTLEADRVY THSYPLLVLH PSGVKKMGEI HLAVRFTCSS
501: LLNMMYMYSM PLLPKMHYLH PLTVSQLDNL RHQATQIVST RLTRAEPPLR KEVVEYMLDV GSHMWSMRRS KANFFRIMGV LSGIIAVGKW FEQICVWKNP
601: ITTVLIHILF IILVIYPELI LPTIFLYLFL IGVWYYRWRP RHPPHMDTRL SHADSAHPDE LDEEFDTFPT SRPSDIVRMR YDRLRSIAGR IQTVVGDLAT
701: QGERFQSLLS WRDPRATALF VLFCLIAAVI LYITPFQVVA FAIGLYVLRH PRLRYKLPSV PLNFFRRLPA RTDCML
101: YLEATVKDKD LVKDDLIGRV VFDLNEIPKR VPPDSPLAPQ WYRLEDGKGQ KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPSDKGR YPEVFVKVIM GNQALRTRVS QSRSINPMWN EDLMFVVAEP FEEPLILSVE DRVAPNKDEV LGRCAVPLQY LDKRFDYRPV
301: NSRWFNLEKH VIMEGGEKKE IKFASKIHMR ICLEGGYHVL DESTHYSSDL RPTAKQLWKP NIGVLELGVL NATGLMPMKA KEGGRGTTDA YCVAKYGQKW
401: IRTRTIIDSF TPRWNEQYTW EVFDPCTVVT VGVFDNCHLH GGDKNNGGGK DSRIGKVRIR LSTLEADRVY THSYPLLVLH PSGVKKMGEI HLAVRFTCSS
501: LLNMMYMYSM PLLPKMHYLH PLTVSQLDNL RHQATQIVST RLTRAEPPLR KEVVEYMLDV GSHMWSMRRS KANFFRIMGV LSGIIAVGKW FEQICVWKNP
601: ITTVLIHILF IILVIYPELI LPTIFLYLFL IGVWYYRWRP RHPPHMDTRL SHADSAHPDE LDEEFDTFPT SRPSDIVRMR YDRLRSIAGR IQTVVGDLAT
701: QGERFQSLLS WRDPRATALF VLFCLIAAVI LYITPFQVVA FAIGLYVLRH PRLRYKLPSV PLNFFRRLPA RTDCML
Arabidopsis Description
Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9C8H3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.