Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G03435.1 | Thale cress | cytosol | 70.57 | 75.3 |
| CDX77002 | Canola | cytosol, peroxisome, plasma membrane | 48.05 | 64.53 |
| Bra034266.1-P | Field mustard | cytosol | 57.23 | 63.55 |
| CDX71710 | Canola | cytosol | 57.86 | 60.29 |
| CDY35343 | Canola | golgi | 20.75 | 58.93 |
| Bra007628.1-P | Field mustard | cytosol | 58.49 | 57.84 |
| CDY35342 | Canola | cytosol, peroxisome, plasma membrane | 35.22 | 57.61 |
| CDY11377 | Canola | cytosol | 58.24 | 57.59 |
| Solyc03g095420.1.1 | Tomato | cytosol | 2.89 | 40.35 |
| AT3G57880.3 | Thale cress | cytosol | 39.12 | 40.23 |
| AT5G12970.1 | Thale cress | cytosol | 38.11 | 39.4 |
| AT1G51570.1 | Thale cress | cytosol | 38.11 | 39.05 |
| AT4G20080.1 | Thale cress | cytosol | 35.97 | 36.95 |
| AT5G06850.1 | Thale cress | cytosol | 36.48 | 36.52 |
| AT5G44760.1 | Thale cress | cytosol | 20.75 | 34.52 |
| AT3G61300.1 | Thale cress | cytosol | 35.47 | 29.01 |
| AT4G11610.1 | Thale cress | cytosol | 35.85 | 28.19 |
| AT1G04150.1 | Thale cress | cytosol | 35.09 | 27.57 |
| AT5G48060.1 | Thale cress | cytosol | 35.85 | 27.51 |
| AT4G00700.1 | Thale cress | cytosol | 34.72 | 27.44 |
| AT1G22610.1 | Thale cress | cytosol | 34.34 | 26.53 |
| AT3G03680.1 | Thale cress | cytosol | 31.82 | 24.88 |
| AT1G74720.1 | Thale cress | cytosol | 32.7 | 24.05 |
| AT5G17980.1 | Thale cress | cytosol | 30.44 | 23.07 |
| HORVU2Hr1G123810.1 | Barley | cytosol | 1.13 | 4.27 |
| HORVU7Hr1G109210.1 | Barley | plastid | 0.75 | 2.39 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | EntrezGene:825345 | UniProt:A0A178VCI3 | ProteinID:AEE80247.1 | ArrayExpress:AT3G61720 |
| EnsemblPlantsGene:AT3G61720 | RefSeq:AT3G61720 | TAIR:AT3G61720 | RefSeq:AT3G61720-TAIR-G | EnsemblPlants:AT3G61720.1 | TAIR:AT3G61720.1 |
| Unigene:At.65308 | InterPro:C2_dom | InterPro:C2_domain_sf | ProteinID:CAB71102.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:IPR000008 |
| InterPro:IPR035892 | RefSeq:NP_191731.1 | ProteinID:OAP03351.1 | PFAM:PF00168 | PFAM:PF08372 | InterPro:PRibTrfase_C |
| PFscan:PS50004 | PANTHER:PTHR10024 | PANTHER:PTHR10024:SF226 | UniProt:Q9M366 | SMART:SM00239 | SUPFAM:SSF49562 |
| TMHMM:TMhelix | UniParc:UPI00000488B1 | SEG:seg | : | : | : |
Description
Ca2+dependent plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M366]
Coordinates
chr3:-:22843011..22845398
Molecular Weight (calculated)
90773.4 Da
IEP (calculated)
8.967
GRAVY (calculated)
-0.084
Length
795 amino acids
Sequence
(BLAST)
(BLAST)
001: MAANKDEFSV KQIFPKLGGE RGARNPRYGP TSSHDLVEQM EFLYVQVIQA INNSVVNPSA RICCPVVEIT LGNYKSSTKN LPMGPNMDWN QVFAFDKSKG
101: DVLSVTLKDG PTNTVINKRN FKLASEIPTR VPPDARIAPQ WYSMHNTETD FYMELLMSVW FGTQVDEVYP EAWFSDACEV CASRVINTRP KVYLAPRLCY
201: VRVTIVSGHD LISKDKNKTP SVYVTATLGK VALKTKVSSG TNPSWNQDLI FVASEPLEGT VYIRLIDRED EQHEGCIGTL KKKLTEMTPL KVPSSAPALF
301: YDIEMPTEVK PAGDSRRFAS RLKMKLATDQ AYHVAEECTQ YSSDNRAFVK GLWPGLLGKL EIGILGATGL KGSDEKKQTI DSYVVAKYGN KWARTRTVVN
401: SVSPKWNEQY SWDVYEKCTV LTLGIYDNRQ ILEDKNKAND VPIGKVRIPL NRVQSDWIYT CSYPILKLGS SGLKKMGELQ LAVRFVYVAQ GYARYSAPFR
501: WMLPKAHYKS PLSMYQIDKL RAQAVEINCA NLARTEPALR SEVVSDMLKP KSRNFSIRIS KDNFDRLYTV VKMVLWCVSV IASVRSTTAC TPKFIALGVS
601: FVFLFWEYYI YWLVTSWLVA YCIVLCIVVI LLREILKSPR QTYNWLFYRN VTPPPLILVD LKLRKLDSIN LDELAEEFDS FPSSENDLNI LRMRYDRLRK
701: IMENVMLLMG DAATQGERLL AAFTLLERPF VLIILLALCY CSMLVVCLGW DLHVRKCLIF VFICYWVQLP WFRNNLPDGS LNFFRRLPSN EDLMF
101: DVLSVTLKDG PTNTVINKRN FKLASEIPTR VPPDARIAPQ WYSMHNTETD FYMELLMSVW FGTQVDEVYP EAWFSDACEV CASRVINTRP KVYLAPRLCY
201: VRVTIVSGHD LISKDKNKTP SVYVTATLGK VALKTKVSSG TNPSWNQDLI FVASEPLEGT VYIRLIDRED EQHEGCIGTL KKKLTEMTPL KVPSSAPALF
301: YDIEMPTEVK PAGDSRRFAS RLKMKLATDQ AYHVAEECTQ YSSDNRAFVK GLWPGLLGKL EIGILGATGL KGSDEKKQTI DSYVVAKYGN KWARTRTVVN
401: SVSPKWNEQY SWDVYEKCTV LTLGIYDNRQ ILEDKNKAND VPIGKVRIPL NRVQSDWIYT CSYPILKLGS SGLKKMGELQ LAVRFVYVAQ GYARYSAPFR
501: WMLPKAHYKS PLSMYQIDKL RAQAVEINCA NLARTEPALR SEVVSDMLKP KSRNFSIRIS KDNFDRLYTV VKMVLWCVSV IASVRSTTAC TPKFIALGVS
601: FVFLFWEYYI YWLVTSWLVA YCIVLCIVVI LLREILKSPR QTYNWLFYRN VTPPPLILVD LKLRKLDSIN LDELAEEFDS FPSSENDLNI LRMRYDRLRK
701: IMENVMLLMG DAATQGERLL AAFTLLERPF VLIILLALCY CSMLVVCLGW DLHVRKCLIF VFICYWVQLP WFRNNLPDGS LNFFRRLPSN EDLMF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.