Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024523.1-P | Field mustard | cytosol | 91.55 | 92.72 |
| CDY21373 | Canola | cytosol | 91.35 | 92.7 |
| CDY04800 | Canola | cytosol | 90.57 | 92.55 |
| KRH23748 | Soybean | nucleus | 72.59 | 73.96 |
| KRH44923 | Soybean | nucleus | 72.79 | 73.43 |
| VIT_18s0072g01170.t01 | Wine grape | cytosol | 70.55 | 72.46 |
| PGSC0003DMT400089685 | Potato | cytosol | 68.8 | 69.01 |
| PGSC0003DMT400023971 | Potato | cytosol | 68.8 | 69.01 |
| Solyc11g022400.1.1 | Tomato | nucleus | 61.42 | 67.31 |
| AT3G57880.3 | Thale cress | cytosol | 50.15 | 66.75 |
| AT1G51570.1 | Thale cress | cytosol | 49.85 | 66.11 |
| AT5G12970.1 | Thale cress | cytosol | 49.27 | 65.93 |
| TraesCS1B01G279300.1 | Wheat | mitochondrion | 49.27 | 65.84 |
| Os05t0429700-01 | Rice | plastid | 51.02 | 65.3 |
| EES19579 | Sorghum | plastid | 51.21 | 65.22 |
| Zm00001d038340_P001 | Maize | plasma membrane, plastid | 51.21 | 65.14 |
| HORVU1Hr1G075050.2 | Barley | mitochondrion | 50.92 | 65.09 |
| Zm00001d010202_P001 | Maize | plasma membrane | 50.83 | 64.65 |
| TraesCS1D01G268800.1 | Wheat | plasma membrane, plastid | 50.63 | 64.56 |
| TraesCS1A01G268700.1 | Wheat | plasma membrane, plastid | 50.53 | 64.44 |
| GSMUA_Achr3P22190_001 | Banana | cytosol | 52.28 | 62.85 |
| Solyc11g022460.1.1 | Tomato | nucleus | 45.0 | 62.65 |
| GSMUA_Achr10P... | Banana | cytosol | 47.62 | 61.95 |
| TraesCS1A01G014300.1 | Wheat | cytosol | 46.74 | 60.81 |
| TraesCS1D01G012500.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.79 | 60.56 |
| GSMUA_Achr5P01190_001 | Banana | cytosol | 35.57 | 60.2 |
| HORVU1Hr1G001710.1 | Barley | mitochondrion | 47.33 | 59.54 |
| OQU82647 | Sorghum | cytosol, nucleus, plasma membrane | 59.38 | 59.49 |
| TraesCS2B01G621600.1 | Wheat | cytosol | 29.35 | 58.75 |
| Os04t0691800-01 | Rice | plasma membrane | 58.11 | 58.57 |
| AT5G06850.1 | Thale cress | cytosol | 45.19 | 58.56 |
| Zm00001d002939_P001 | Maize | cytosol, nucleus, plasma membrane | 59.96 | 58.43 |
| TraesCS2B01G622500.1 | Wheat | cytosol, nucleus, plasma membrane | 58.7 | 58.24 |
| TraesCS2A01G557900.1 | Wheat | cytosol, nucleus, plasma membrane | 58.5 | 57.83 |
| HORVU2Hr1G126730.1 | Barley | cytosol, nucleus, plasma membrane | 58.21 | 57.43 |
| TraesCS2D01G571700.1 | Wheat | cytosol, nucleus, plasma membrane | 58.7 | 57.31 |
| TraesCS2A01G558400.1 | Wheat | cytosol | 39.65 | 56.12 |
| AT4G11610.1 | Thale cress | cytosol | 51.51 | 52.42 |
| AT5G48060.1 | Thale cress | cytosol | 51.12 | 50.77 |
| AT4G00700.1 | Thale cress | cytosol | 49.08 | 50.2 |
| AT4G20080.1 | Thale cress | cytosol | 37.71 | 50.13 |
| AT3G61300.1 | Thale cress | cytosol | 46.16 | 48.87 |
| AT1G04150.1 | Thale cress | cytosol | 47.81 | 48.62 |
| AT5G44760.1 | Thale cress | cytosol | 21.38 | 46.03 |
| AT3G03680.1 | Thale cress | cytosol | 41.98 | 42.48 |
| AT1G74720.1 | Thale cress | cytosol | 42.27 | 40.24 |
| AT5G17980.1 | Thale cress | cytosol | 40.23 | 39.47 |
| AT5G03435.1 | Thale cress | cytosol | 25.46 | 35.17 |
| AT3G61720.1 | Thale cress | cytosol | 26.53 | 34.34 |
| TraesCSU01G020600.1 | Wheat | cytosol | 22.84 | 33.91 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | EntrezGene:838867 | UniProt:A0A178WDW6 | ProteinID:AAF18518.1 | ProteinID:AEE30260.1 |
| ArrayExpress:AT1G22610 | EnsemblPlantsGene:AT1G22610 | RefSeq:AT1G22610 | TAIR:AT1G22610 | RefSeq:AT1G22610-TAIR-G | EnsemblPlants:AT1G22610.1 |
| TAIR:AT1G22610.1 | Unigene:At.21969 | InterPro:C2_dom | InterPro:C2_domain_sf | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0009506 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0016757 | InterPro:IPR000008 | InterPro:IPR035892 | RefSeq:NP_173675.1 | ProteinID:OAP15675.1 | PFAM:PF00168 |
| PFAM:PF08372 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | InterPro:PRibTrfase_C | PFscan:PS50004 | PANTHER:PTHR10024 | PANTHER:PTHR10024:SF272 | UniProt:Q9SKA3 |
| SMART:SM00239 | SUPFAM:SSF49562 | TMHMM:TMhelix | UniParc:UPI00000482AB | SEG:seg | : |
Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKA3]
Coordinates
chr1:+:7994262..7997588
Molecular Weight (calculated)
118372.0 Da
IEP (calculated)
9.287
GRAVY (calculated)
-0.452
Length
1029 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNKLVVEIVD ASDLMPKDGQ GSASPFVEVE FDEQRQRTQT RFKDLNPQWN EKLVFNVGDL KRLNNKTVDV TVYDDRRDNQ PGKFLGRVKI AGAVVPLSES
0101: ESGVQRYPLD KRGLFSNIKG DIALRIYAAP IDGGDFVSPP PDFAEKVMKE DKRFESQEFQ FQNQNQNQNH YEQFEDEINN METLKPTKKK EKESRTFHSI
0201: GAHAGGGGGA PPMSQAKQAY PPPPNQPEFR SDFMRAPGPP TGAVMQMQPP RQQNPEFQLI ETSPPLAARM RQSYYYRSSG DKTSSTYDLV EQMHYLYVSV
0301: VKARDLPVMD VSGSLDPYVE VKLGNYKGLT KHLEKNSNPI WKQIFAFSKE RLQSNLLEVT VKDKDLLTKD DFVGRVHIDL TEVPLRVPPD SPLAPQWYRL
0401: EDKKGMKTNR GEIMLAVWMG TQADESFPDA WHSDAHRVSH SNLSNTRSKV YFSPKLYYLR IHVMEAQDLV PSDKGRVPDA IVKIQAGNQM RATRTPQMRT
0501: MNPQWHEELM FVVSEPFEDM VIVSVDDRIG PGKDEILGRV FIPVRDVPVR QEVGKMPDPR WFNLQRHSMS MEEENEKRKE KFSSKILLRV CIEAGYHVLD
0601: ESTHFSSDLQ PSSKHLRKPS IGILELGILS ARNLMPMKGK DGRMTDPYCV AKYGNKWVRT RTLLDALAPK WNEQYTWEVH DPCTVITIGV FDNSHVNDGG
0701: DFKDQRIGKV RVRLSTLETD RVYTHFYPLL VLTPGGLKKN GELQLALRYT CTGFVNMMAQ YGRPLLPKMH YIQPIPVRHI DLLRHQAMQI VATRLSRSEP
0801: PLRREVVEYM LDVDYHMFSL RRSKANFSRI MSLLSSVTLV CKWFNDICTW RNPITTCLVH VLFLILVCYP ELILPTVFLY LFVIGMWNYR YRPRHPPHMD
0901: ARVSQADNAH PDELDEEFDT FPTSRPADIV RMRYDRLRSV GGRVQTVVGD LATQGERIQA LLSWRDPRAT ALFIVFALIW AVFIYVTPFQ VIAIIIGLFM
1001: LRHPRFRSRM PSVPANFFKR LPAKSDMLL
0101: ESGVQRYPLD KRGLFSNIKG DIALRIYAAP IDGGDFVSPP PDFAEKVMKE DKRFESQEFQ FQNQNQNQNH YEQFEDEINN METLKPTKKK EKESRTFHSI
0201: GAHAGGGGGA PPMSQAKQAY PPPPNQPEFR SDFMRAPGPP TGAVMQMQPP RQQNPEFQLI ETSPPLAARM RQSYYYRSSG DKTSSTYDLV EQMHYLYVSV
0301: VKARDLPVMD VSGSLDPYVE VKLGNYKGLT KHLEKNSNPI WKQIFAFSKE RLQSNLLEVT VKDKDLLTKD DFVGRVHIDL TEVPLRVPPD SPLAPQWYRL
0401: EDKKGMKTNR GEIMLAVWMG TQADESFPDA WHSDAHRVSH SNLSNTRSKV YFSPKLYYLR IHVMEAQDLV PSDKGRVPDA IVKIQAGNQM RATRTPQMRT
0501: MNPQWHEELM FVVSEPFEDM VIVSVDDRIG PGKDEILGRV FIPVRDVPVR QEVGKMPDPR WFNLQRHSMS MEEENEKRKE KFSSKILLRV CIEAGYHVLD
0601: ESTHFSSDLQ PSSKHLRKPS IGILELGILS ARNLMPMKGK DGRMTDPYCV AKYGNKWVRT RTLLDALAPK WNEQYTWEVH DPCTVITIGV FDNSHVNDGG
0701: DFKDQRIGKV RVRLSTLETD RVYTHFYPLL VLTPGGLKKN GELQLALRYT CTGFVNMMAQ YGRPLLPKMH YIQPIPVRHI DLLRHQAMQI VATRLSRSEP
0801: PLRREVVEYM LDVDYHMFSL RRSKANFSRI MSLLSSVTLV CKWFNDICTW RNPITTCLVH VLFLILVCYP ELILPTVFLY LFVIGMWNYR YRPRHPPHMD
0901: ARVSQADNAH PDELDEEFDT FPTSRPADIV RMRYDRLRSV GGRVQTVVGD LATQGERIQA LLSWRDPRAT ALFIVFALIW AVFIYVTPFQ VIAIIIGLFM
1001: LRHPRFRSRM PSVPANFFKR LPAKSDMLL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.