Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G44760.1 | Thale cress | cytosol | 44.32 | 71.76 |
| AT5G12970.1 | Thale cress | cytosol | 56.72 | 57.09 |
| AT3G57880.3 | Thale cress | cytosol | 56.98 | 57.05 |
| AT1G51570.1 | Thale cress | cytosol | 56.46 | 56.31 |
| Zm00001d036801_P001 | Maize | plasma membrane | 55.56 | 55.56 |
| EER90047 | Sorghum | cytosol | 55.56 | 55.48 |
| Zm00001d046749_P001 | Maize | mitochondrion | 55.17 | 55.1 |
| Os05t0370600-01 | Rice | plastid | 55.04 | 55.04 |
| TraesCS5B01G171600.1 | Wheat | cytosol | 54.13 | 54.34 |
| TraesCS5D01G273300.1 | Wheat | cytosol | 54.26 | 54.26 |
| TraesCS5B01G265100.1 | Wheat | cytosol | 54.26 | 54.26 |
| TraesCS5A01G265400.1 | Wheat | cytosol | 54.26 | 54.26 |
| TraesCS5D01G178600.1 | Wheat | cytosol | 54.01 | 54.22 |
| HORVU5Hr1G073350.1 | Barley | cytosol | 54.13 | 54.13 |
| HORVU5Hr1G053320.2 | Barley | cytosol | 53.75 | 53.96 |
| KRH48448 | Soybean | cytosol | 48.06 | 52.54 |
| Solyc01g086700.2.1 | Tomato | cytosol | 54.01 | 52.25 |
| VIT_13s0064g01400.t01 | Wine grape | cytosol | 52.97 | 51.77 |
| PGSC0003DMT400087204 | Potato | cytosol | 54.26 | 51.72 |
| AT5G06850.1 | Thale cress | cytosol | 52.97 | 51.64 |
| KRH39245 | Soybean | cytosol | 49.61 | 51.2 |
| TraesCS5A01G174100.1 | Wheat | cytosol | 50.39 | 51.11 |
| KRH43466 | Soybean | plasma membrane | 13.95 | 48.0 |
| KRH15602 | Soybean | plasma membrane | 41.21 | 41.16 |
| AT4G11610.1 | Thale cress | cytosol | 53.75 | 41.15 |
| AT3G61300.1 | Thale cress | cytosol | 49.48 | 39.4 |
| AT5G48060.1 | Thale cress | cytosol | 51.94 | 38.8 |
| AT1G04150.1 | Thale cress | cytosol | 50.26 | 38.44 |
| AT4G00700.1 | Thale cress | cytosol | 49.48 | 38.07 |
| AT5G03435.1 | Thale cress | cytosol | 36.56 | 37.99 |
| AT1G22610.1 | Thale cress | cytosol | 50.13 | 37.71 |
| AT3G61720.1 | Thale cress | cytosol | 36.95 | 35.97 |
| AT3G03680.1 | Thale cress | cytosol | 44.7 | 34.02 |
| AT1G74720.1 | Thale cress | cytosol | 47.16 | 33.77 |
| AT5G17980.1 | Thale cress | cytosol | 42.25 | 31.17 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | EntrezGene:827753 | ProteinID:AEE84270.1 | ArrayExpress:AT4G20080 | EnsemblPlantsGene:AT4G20080 |
| RefSeq:AT4G20080 | TAIR:AT4G20080 | RefSeq:AT4G20080-TAIR-G | EnsemblPlants:AT4G20080.1 | TAIR:AT4G20080.1 | Unigene:At.54424 |
| InterPro:C2_dom | InterPro:C2_domain_sf | ProteinID:CAA16616.1 | ProteinID:CAB79008.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:IPR000008 |
| InterPro:IPR035892 | RefSeq:NP_193741.1 | UniProt:O49435 | PFAM:PF00168 | PFAM:PF08372 | InterPro:PRibTrfase_C |
| PFscan:PS50004 | PANTHER:PTHR10024 | PANTHER:PTHR10024:SF226 | SMART:SM00239 | SUPFAM:SSF49562 | TMHMM:TMhelix |
| UniParc:UPI000004898E | SEG:seg | : | : | : | : |
Description
Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:O49435]
Coordinates
chr4:+:10865295..10867619
Molecular Weight (calculated)
87777.2 Da
IEP (calculated)
8.491
GRAVY (calculated)
-0.114
Length
774 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVNGTGNGT GDGDFSLKET SPNIGNGGVN GGEKLTSSFD LVEAMHFLYA RIVRARALPV NDSFVAVKIG SYKGRTKQIL NSNPNPEFHE TFAFTKTRLQ
101: GDILEVVVRN RDNPNEDDIV GKCKFDVAEI PTRVPPDSPL APQWYRLEDR NGVKIGGEIM VSVWIGTQAD EVFSEAWHSD SASVTGENVV NTRSKVYLSP
201: RLWYLRVNVI EAQDLVLLHP NRINPEILIK GFLGNVVVRS RISQTKSVSP VWNEDMMFVA VEPFDDSLIL SVEDKVGPRE ECLGRCEIKL SQVERRVLPG
301: PVPSLWYNVE HIGETGEGRR FAGRIHLRVS LDGGYHVLDE SIQYSSDYRA SAKLLWTPPI GVLELGVLNA TGLMPMKSRG GRGTTDAYCV AKYGTKWVRT
401: RTIVDTFDPK WNEQYTWEVY DPYTVITIGV FDNLKLFGAG NENRLINDSR IGKIRIRLST LVTSKIYTHS YPLMVLKPDG VKKMGEIQLA VRFTATSMMD
501: MLQKYTEPLL PEMHYISPLS IYQLDSLRHQ ATHILCINLG RNEPALGRDV VEYMLDVGSN IWSLRRGRAN FERLVSFFDG WIDAWKWFDE ICKWKSPVTS
601: VLVHIVCLFV VFLPKYCVFS MLLYCFVFGL YRFGLRPRHP PHMDIKLSKA DSALPDELDE EFDVFPSSKS GDVLKRRYDR LRGIAGRMMI VLGDLATQGE
701: RVKSLLSWRD PRATSLFLTF CFVSCGVICF VSMKLLLTFL AFYVMRHPRV RVFDIPSIPQ NFFRRLPSRA DSIL
101: GDILEVVVRN RDNPNEDDIV GKCKFDVAEI PTRVPPDSPL APQWYRLEDR NGVKIGGEIM VSVWIGTQAD EVFSEAWHSD SASVTGENVV NTRSKVYLSP
201: RLWYLRVNVI EAQDLVLLHP NRINPEILIK GFLGNVVVRS RISQTKSVSP VWNEDMMFVA VEPFDDSLIL SVEDKVGPRE ECLGRCEIKL SQVERRVLPG
301: PVPSLWYNVE HIGETGEGRR FAGRIHLRVS LDGGYHVLDE SIQYSSDYRA SAKLLWTPPI GVLELGVLNA TGLMPMKSRG GRGTTDAYCV AKYGTKWVRT
401: RTIVDTFDPK WNEQYTWEVY DPYTVITIGV FDNLKLFGAG NENRLINDSR IGKIRIRLST LVTSKIYTHS YPLMVLKPDG VKKMGEIQLA VRFTATSMMD
501: MLQKYTEPLL PEMHYISPLS IYQLDSLRHQ ATHILCINLG RNEPALGRDV VEYMLDVGSN IWSLRRGRAN FERLVSFFDG WIDAWKWFDE ICKWKSPVTS
601: VLVHIVCLFV VFLPKYCVFS MLLYCFVFGL YRFGLRPRHP PHMDIKLSKA DSALPDELDE EFDVFPSSKS GDVLKRRYDR LRGIAGRMMI VLGDLATQGE
701: RVKSLLSWRD PRATSLFLTF CFVSCGVICF VSMKLLLTFL AFYVMRHPRV RVFDIPSIPQ NFFRRLPSRA DSIL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.