Factsheet for TraesCS5D01G178600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G171600.1	Wheat	cytosol	98.44	98.44
HORVU5Hr1G053320.2	Barley	cytosol	96.89	96.89
TraesCS5A01G174100.1	Wheat	cytosol	90.14	91.09
TraesCS5D01G273300.1	Wheat	cytosol	79.51	79.2
Solyc10g080420.1.1	Tomato	nucleus	54.73	77.72
AT3G57880.3	Thale cress	cytosol	77.17	76.97
CDY69710	Canola	cytosol	77.69	76.89
Bra014601.1-P	Field mustard	cytosol	77.56	76.86
VIT_08s0007g06170.t01	Wine grape	cytosol	77.3	76.71
CDX67712	Canola	cytosol	76.91	76.61
KRG95352	Soybean	endoplasmic reticulum	76.91	76.52
Bra003302.1-P	Field mustard	cytosol	76.78	76.49
CDX98254	Canola	cytosol	76.65	76.36
KRH67030	Soybean	endoplasmic reticulum, mitochondrion, nucleus	76.65	76.26
PGSC0003DMT400060959	Potato	cytosol	75.75	76.14
PGSC0003DMT400029745	Potato	cytosol	76.26	76.07
Solyc10g078680.1.1	Tomato	cytosol	74.06	75.73
GSMUA_Achr1P09320_001	Banana	cytosol	57.46	75.6
Solyc10g080430.1.1	Tomato	nucleus	75.75	75.45
AT1G51570.1	Thale cress	cytosol	75.75	75.26
KRH32992	Soybean	cytosol	75.23	75.03
PGSC0003DMT400060862	Potato	cytosol	75.1	74.9
AT5G12970.1	Thale cress	cytosol	72.37	72.56
CDY47660	Canola	endoplasmic reticulum	77.82	72.46
CDX97214	Canola	cytosol	72.11	72.3
CDY68091	Canola	cytosol	71.98	72.17
CDX78498	Canola	cytosol	71.98	72.17
Bra006172.1-P	Field mustard	cytosol	71.98	72.17
Bra008867.1-P	Field mustard	cytosol	71.85	72.04
CDX70485	Canola	cytosol	71.72	71.91
KRH29670	Soybean	cytosol	72.37	71.81
KRH23178	Soybean	cytosol	71.85	71.48
KRH10160	Soybean	cytosol	71.08	70.8
VIT_06s0004g01550.t01	Wine grape	cytosol, peroxisome, plasma membrane	67.57	68.02
PGSC0003DMT400011904	Potato	cytosol	67.44	67.44
PGSC0003DMT400011903	Potato	cytosol	49.03	67.02
Solyc01g006620.2.1	Tomato	cytosol	65.11	65.36
PGSC0003DMT400055029	Potato	cytosol	64.98	65.23
VIT_13s0064g01400.t01	Wine grape	cytosol	64.72	63.01
Solyc01g086700.2.1	Tomato	cytosol	63.16	60.88
TraesCS7D01G396900.1	Wheat	cytosol	64.2	60.81
PGSC0003DMT400087204	Potato	cytosol	63.29	60.1
PGSC0003DMT400013490	Potato	cytosol	41.12	58.81
Solyc02g044030.1.1	Tomato	cytosol, nucleus, unclear	25.16	57.23
KRH48448	Soybean	cytosol	51.36	55.93
Bra027570.1-P	Field mustard	cytosol	54.86	55.66
TraesCS1D01G268800.1	Wheat	plasma membrane, plastid	58.24	55.64
KRH39245	Soybean	cytosol	53.31	54.8
TraesCS1D01G012500.1	Wheat	cytosol, peroxisome, plasma membrane	50.06	54.37
AT4G20080.1	Thale cress	cytosol	54.22	54.01
TraesCS2D01G333300.1	Wheat	cytosol	57.2	53.65
CDY49185	Canola	cytosol	23.22	53.27
CDY13087	Canola	cytosol	30.87	51.97
TraesCS6D01G228900.1	Wheat	cytosol	51.36	50.97
TraesCS2D01G598200.1	Wheat	cytosol	66.28	50.3
KRH43466	Soybean	plasma membrane	14.4	49.33
AT5G44760.1	Thale cress	cytosol	30.35	48.95
CDY57334	Canola	cytosol	28.02	48.87
KRH15602	Soybean	plasma membrane	45.14	44.9
TraesCS2D01G234800.1	Wheat	cytosol	59.66	44.4
TraesCS6D01G371600.1	Wheat	cytosol	57.72	44.19
TraesCS2D01G571700.1	Wheat	cytosol, nucleus, plasma membrane	58.37	42.69
TraesCS4D01G011200.1	Wheat	cytosol, nucleus, plasma membrane	50.84	37.69
TraesCS7D01G478500.1	Wheat	cytosol	52.92	37.6
TraesCS3D01G399900.1	Wheat	cytosol, plasma membrane	42.93	36.74
TraesCS5D01G484400.1	Wheat	cytosol	45.53	33.81

Protein Annotations

EnsemblPlants:TraesCS5D01G178600.1	EnsemblPlantsGene:TraesCS5D01G178600	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	InterPro:PRibTrfase_C	PANTHER:PTHR31425	PANTHER:PTHR31425:SF6	PFAM:PF00168	PFAM:PF08372
PFscan:PS50004	SMART:SM00239	SUPFAM:SSF49562	TIGR:cd04019	TIGR:cd08378	TIGR:cd08379
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:278137544..278139859

Molecular Weight (calculated)

88396.0 Da

IEP (calculated)

9.175

GRAVY (calculated)

-0.307

Length

771 amino acids

Sequence
(BLAST)

001: MQPPQPRPED YTLKETTPRL GGFMAAGDKR TSTYDLVEQM PYLYVRAVKA KDLHAKDGSG SCDPSVEIKL GNYRCTTRQF EKNTNPEWNQ VFAFPKERIQ
101: SSYIEITVKD KDDIIGRVIF DLNEVPKRVP PDSPLAPEWY RLEGQKEGRG GELMLAVWMG SQADEAFPEA WHADAATVPS DGLASIRSKV YLTPKLWYLR
201: VNVIEAQDLV PSDKCRYPEV YVKATLGNQS LRTRISASKS VNPMWNEDLM FVAAEPFEEH LILSVEDRIA PNKDEVLGKA CIPLQNVDRR PDHRPVHSRW
301: CNLEKHVAGD GEQKKKDVKF SSRIHLRISL DGGYHVLDES AHYSSDLRAT EKQLWKPSIG VLELGILNAQ GLLAMKTKDG HGTTDSYCVA KYGHKWVRTR
401: TIIDSFGPKW NEQYTWDVYD PCTVITVGVF DNCHLQGEKS KGNKDSRIGK VRIRLSTLES GRVYTHSYPL IILLPTGVKK MGEVQLAVRF TCYSLVNMMQ
501: LYSQPLLPKM HYVYPLSVTQ LDVLRLQATH MVSTKLSRAE PPLRKEVVEY MLDVDSHMWS MRKSKANFFR IMKVLNPLVG AAQWFDKICE WKNPLTTVLI
601: HLLFIILVMF PELILPTVSL YLFLIGVWFY RWRPRQPPHM DTRLSHAETS NPDEFDEEFD TFPTSRAHDV VRMRYDRLRS IAGRVQTVVG DLATQGERLQ
701: SLLNWRDPRA TAIFVTFCLI AAVVLYLVPF RMVVLIAGLY VLRHPRFRRH GLPSAPLNFF RRLPAKTDSL L

Best Arabidopsis Sequence Match ( AT3G57880.4 )
(BLAST)

001: MQRPPPEDFS LKETRPHLGG GKLSGDKLTS TYDLVEQMQY LYVRVVKAKE LPGKDMTGSC DPYVEVKLGN YKGTTRHFEK KSNPEWNQVF AFSKDRIQAS
101: FLEATVKDKD FVKDDLIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV
301: NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR
401: TRTIIDSFTP RWNEQYTWEV FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG VKKMGEIHLA VRFTCSSLLN
501: MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT RAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT
601: VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE
701: RLQSLLSWRD PRATALFVLF CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML

Arabidopsis Description

Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.