Factsheet for Solyc10g078680.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029745	Potato	cytosol	99.47	97.02
Solyc10g080420.1.1	Tomato	nucleus	64.59	89.69
Solyc10g080430.1.1	Tomato	nucleus	90.58	88.24
KRG95352	Soybean	endoplasmic reticulum	88.99	86.58
KRH67030	Soybean	endoplasmic reticulum, mitochondrion, nucleus	88.73	86.32
AT3G57880.3	Thale cress	cytosol	88.2	86.03
CDX67712	Canola	cytosol	87.93	85.66
Bra003302.1-P	Field mustard	cytosol	87.93	85.66
CDX98254	Canola	cytosol	87.8	85.53
VIT_08s0007g06170.t01	Wine grape	cytosol	88.06	85.46
CDY69710	Canola	cytosol	88.2	85.37
Bra014601.1-P	Field mustard	cytosol	88.06	85.35
KRH32992	Soybean	cytosol	86.74	84.61
AT1G51570.1	Thale cress	cytosol	86.74	84.28
GSMUA_Achr9P12510_001	Banana	cytosol	44.56	82.96
Os05t0370600-01	Rice	plastid	84.35	82.17
TraesCS5B01G265100.1	Wheat	cytosol	83.42	81.27
TraesCS5A01G265400.1	Wheat	cytosol	83.42	81.27
HORVU5Hr1G073350.1	Barley	cytosol	83.29	81.14
TraesCS5D01G273300.1	Wheat	cytosol	83.29	81.14
EER90047	Sorghum	cytosol	83.16	80.9
Zm00001d046749_P001	Maize	mitochondrion	82.49	80.26
CDY47660	Canola	endoplasmic reticulum	87.93	80.07
Zm00001d036801_P001	Maize	plasma membrane	81.83	79.72
TraesCS5B01G171600.1	Wheat	cytosol	76.39	74.71
HORVU5Hr1G053320.2	Barley	cytosol	75.99	74.32
TraesCS5D01G178600.1	Wheat	cytosol	75.73	74.06
TraesCS5A01G174100.1	Wheat	cytosol	69.5	68.68
Solyc03g095420.1.1	Tomato	cytosol	5.17	68.42
Solyc01g006620.2.1	Tomato	cytosol	69.63	68.36
Solyc02g044030.1.1	Tomato	cytosol, nucleus, unclear	30.64	68.14
Solyc03g077920.1.1	Tomato	cytosol	68.3	65.27
Solyc01g086700.2.1	Tomato	cytosol	68.04	64.12
Solyc08g008020.1.1	Tomato	plastid	70.29	53.0
Solyc01g094410.2.1	Tomato	nucleus	69.63	52.03
Solyc01g086720.2.1	Tomato	cytosol	72.55	50.32
Solyc11g022400.1.1	Tomato	nucleus	61.27	49.2
Solyc09g064230.1.1	Tomato	cytosol	63.93	47.72
Solyc11g022460.1.1	Tomato	nucleus	38.99	39.78
Solyc03g113190.1.1	Tomato	cytosol	53.98	38.87
Solyc01g007170.2.1	Tomato	cytosol	48.28	38.32
Solyc01g065500.2.1	Tomato	cytosol	48.94	37.2

Protein Annotations

EnsemblPlants:Solyc10g078680.1.1	EnsemblPlantsGene:Solyc10g078680.1	Gene3D:2.60.40.150	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	InterPro:PRibTrfase_C	PANTHER:PTHR10024
PANTHER:PTHR10024:SF243	PFAM:PF00168	PFAM:PF08372	PFscan:PS50004	SEG:seg	SMART:SM00239
SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI000276A3DC	UniProt:K4D2B0	MapMan:35.1	:

Description

No Description!

Coordinates

chr10:-:60418140..60420458

Molecular Weight (calculated)

86698.2 Da

IEP (calculated)

9.397

GRAVY (calculated)

-0.231

Length

754 amino acids

Sequence
(BLAST)

001: MQRPHQEDFS LKETKPHLGG GKITGDKLTS TYDLVEQMQY LYVRVVKAKD LPAKDVTGSL DPYVEVKLGN YKGTTRHFEK KSNPEWSQVF AFSKDRIQAS
101: VLEVIVKDKD FVKDDFVGRV LFDLNDIPKR VPPDSPLAPQ WYRLEERNGT KVKGELMLAV WMGNQADEAF PEAWHSDAAA VSGADGLANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPNDKSR FPEVYVKAML GNQALRTRVS MSKTINPLWN EDLMFVAAEP FEEPLILSVE DRVANKDEVL GRCAIPLQYV DRRLDHRPVN
301: TRWFNLEKHV IVEGEKKEIK FASRIHMRVC LEGGYHVLDE STHYSSDLRP TAKQLWKSSI GVLEVGVLSA QGLSPMKTKD GRATTDAYCV AKYGQKWVRT
401: RTIIDSFAPR WNEQYTWEVF DPCTVITIGV FDNCHLQGGD KSGGARDSRI GKVRIRLSTL ETDRVYTHSY PLLVLHPTGV KKMGEIHLPL LPKMHYLHPL
501: TVTQLDNLRH QATQIVSLRL SRAEPPLRKE IVEYMLDVTS HMWSMRRSKA NFFRIMGVLG VVISVGKWFD QICNWKNPIT TVLIHILFLI LVLYPELILP
601: TIFLYLFLIG IWYYRWRPRH PPHMDTRLSC ADTAHPDELD EEFDTFPTSR SPDIIRMRYD RIRSIAGRIQ TVVGDLATQG ERLQSLLSWR DPRATALFVI
701: FCLVAAVVLY VTPFQAVGLL TGFYVLRHPR FRYKLPSVPL NFFRRLPART DCML

Best Arabidopsis Sequence Match ( AT3G57880.4 )
(BLAST)

001: MQRPPPEDFS LKETRPHLGG GKLSGDKLTS TYDLVEQMQY LYVRVVKAKE LPGKDMTGSC DPYVEVKLGN YKGTTRHFEK KSNPEWNQVF AFSKDRIQAS
101: FLEATVKDKD FVKDDLIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV
301: NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR
401: TRTIIDSFTP RWNEQYTWEV FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG VKKMGEIHLA VRFTCSSLLN
501: MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT RAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT
601: VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE
701: RLQSLLSWRD PRATALFVLF CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML

Arabidopsis Description

Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.