Factsheet for Solyc03g077920.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046026	Potato	cytosol	98.86	98.61
GSMUA_Achr1P16560_001	Banana	endoplasmic reticulum, plasma membrane	27.5	81.89
VIT_02s0087g00450.t01	Wine grape	extracellular	9.25	78.49
AT5G06850.1	Thale cress	cytosol	78.58	78.09
CDX81020	Canola	cytosol	39.42	77.94
KRH32998	Soybean	cytosol	78.58	77.79
KRH71900	Soybean	endoplasmic reticulum	78.45	77.76
Bra005915.1-P	Field mustard	cytosol	77.69	77.3
CDY70344	Canola	cytosol	49.18	76.98
GSMUA_Achr9P27720_001	Banana	mitochondrion	46.39	74.85
GSMUA_Achr1P16550_001	Banana	cytosol	32.32	74.78
Solyc10g080420.1.1	Tomato	nucleus	48.92	71.09
Zm00001d036804_P001	Maize	cytosol	60.58	70.71
CDX81021	Canola	cytosol	25.6	70.38
EER90045	Sorghum	cytosol	72.12	69.99
TraesCS7B01G302900.1	Wheat	cytosol	70.85	68.84
TraesCS7A01G403500.1	Wheat	cytosol	70.72	68.63
HORVU7Hr1G094580.2	Barley	cytosol	70.85	68.5
Os06t0614000-01	Rice	cytosol	71.48	68.45
TraesCS7D01G396900.1	Wheat	cytosol	70.47	68.3
Solyc10g078680.1.1	Tomato	cytosol	65.27	68.3
TraesCS7B01G481700.1	Wheat	cytosol	10.77	67.46
Solyc10g080430.1.1	Tomato	nucleus	65.53	66.8
Solyc01g006620.2.1	Tomato	cytosol	60.71	62.37
TraesCS2D01G333300.1	Wheat	cytosol	63.12	60.58
TraesCS2A01G329400.1	Wheat	cytosol	63.12	60.36
Solyc01g086700.2.1	Tomato	cytosol	57.54	56.75
Zm00001d003321_P001	Maize	cytosol	61.85	56.55
KXG26530	Sorghum	cytosol	62.1	56.45
Solyc01g086720.2.1	Tomato	cytosol	77.31	56.12
GSMUA_Achr3P11130_001	Banana	cytosol	50.95	56.07
Os04t0472900-01	Rice	cytosol	60.46	55.79
Solyc02g044030.1.1	Tomato	cytosol, nucleus, unclear	23.07	53.69
Solyc03g095420.1.1	Tomato	cytosol	3.8	52.63
Solyc08g008020.1.1	Tomato	plastid	64.64	51.0
TraesCS2B01G352900.1	Wheat	mitochondrion	55.39	50.87
Solyc01g094410.2.1	Tomato	nucleus	62.36	48.76
Solyc11g022400.1.1	Tomato	nucleus	54.37	45.69
Solyc09g064230.1.1	Tomato	cytosol	58.43	45.64
Solyc03g113190.1.1	Tomato	cytosol	50.44	38.01
Solyc01g065500.2.1	Tomato	cytosol	47.15	37.5
Solyc01g007170.2.1	Tomato	cytosol	44.36	36.84
Solyc11g022460.1.1	Tomato	nucleus	33.33	35.59
HORVU2Hr1G082010.3	Barley	cytosol	29.4	24.19

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0000003	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005886	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0008565	GO:GO:0009506
GO:GO:0009511	GO:GO:0009628	GO:GO:0009791	GO:GO:0009908	GO:GO:0009911	GO:GO:0010228
GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	GO:GO:0034613	GO:GO:0048574	InterPro:IPR000008
InterPro:IPR035892	UniProt:K4BHM2	PFAM:PF00168	PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004
PANTHER:PTHR10024	PANTHER:PTHR10024:SF236	SMART:SM00239	SUPFAM:SSF49562	EnsemblPlantsGene:Solyc03g077920.1	EnsemblPlants:Solyc03g077920.1.1
TMHMM:TMhelix	UniParc:UPI0002767DAB	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:-:48535804..48538173

Molecular Weight (calculated)

90757.0 Da

IEP (calculated)

9.403

GRAVY (calculated)

-0.285

Length

789 amino acids

Sequence
(BLAST)

001: MGNEQPSNPQ DDYKAKETKP QLGERWPHGG FRGGGGWISS DRVTSTYDLV EQMHFLYVRV VKARDLPPNP VTGSCDPYVE VKLGNYKGKT KHFDKKVNPE
101: WKQVFAFSKE KIQSSVIDVF VRDKEMVQRD DYLGKVVFDM NEVPTRVPPD SPLAPQWYRL EDRRGESKVR GEVMLAVWMG TQADEAFSEA WHADAALVHG
201: EGVHSVRSKV YVSPKLWYLR VNIIESQDVE SLDKTQPPQV FVKAQVGKQV LKTKVCQTRT TNPFWNEDLL FVAAEPFEEQ LVLTVECKAG PSKDEIAGRL
301: VLPLNTFEKR LDHRPVHSRW FNLERFGFGV LEGDRRHERK FSTRIHLRAC LEGGYHVLDE STMYISDQRP TARQLWKQPV GILEVGILSA QGLVPIKAKD
401: GRKTTDAYCV AKYGLKWVRT RTILDNLSPK WNEQYTWEVY DPCTVITLGV FDNGHLGAEN SGKDSRIGKV RIRLSTLETD RIYTMSYPLL VLQPSGVKKM
501: GELQLAFRFT CLSLANIIYL YGHPLLPKMH YLHPFTVNQV DSLRYQAMNI VAVRLGRAEP PLHKEVVEYM LDVDSHMWSM RRSKANFFRI VSLFSGLISM
601: SKWLGEVCKW KNPITTVLVH LLFCILICYP ELILPTMFLY MFLIGIWNHR SRPRQPQHMD TKLSWAEAVI SDELDEEFDT FPTSKPENTV KMRYDRLRSV
701: AGRIQTVIGD MATQGERFQA LLSWRDPRAT SLFIVFCLIA AVILYVTPFK IIALLAALLY LRHPKFRSKM PSPPCNFFRR LPARADSML

Best Arabidopsis Sequence Match ( AT5G06850.1 )
(BLAST)

001: MAAKDGAKSQ EDYKLKDMKP ELGERWPHGG QRGGTGWIGS ERAASTYDLV EQMFYLYVRV VKAKDLPPNP VTSNCDPYVE VKIGNYKGKT KHFEKRTNPE
101: WNQVFAFSKD KVQSSTVEVF VRDKEMVTRD EYIGKVVFDM REVPTRVPPD SPLAPQWYRL EDRRGESKKR GEVMVAVWLG TQADEAFPDA WHSDASSVQG
201: EGVQSVRSKV YVSPKLWYLR VNVIEAQDVE PSDRSQPPQA FVKVQVGNQI LKTKLCPNKT TNPMWNEDLV FVAAEPFEEQ FFLTVENKVT PAKDEVMGRL
301: ISPLSVFEKR LDHRAVHSKW YNLEKFGFGA LEGDKRHELK FSSRIHLRVC LEGGYHVMDE STLYISDVKP TARQLWKSPI GILEVGILSA QGLSPMKTKD
401: GKATTDPYCV AKYGQKWVRT RTIIDSSSPK WNEQYTWEVY DPCTVITLGV FDNCHLGGSE KSNSGAKVDS RIGKVRIRLS TLEADRIYTH SYPLLVLQTK
501: GLKKMGEVQL AVRFTCLSLA HMIYLYGHPL LPKMHYLHPF TVNQLDSLRY QAMSIVAARL SRAEPPLRKE NVEYMLDVDS HMWSMRRSKA NFFRIVSVFA
601: GLIAMSKWLG DVCYWKNPLT TILFHVLFFI LICYPELILP TTFLYMFLIG LWNFRFRPRH PAHMDTKVSW AEAASPDELD EEFDTFPTSK GQDVVKMRYD
701: RLRSVAGRIQ MVVGDIATQG ERFQALLSWR DPRATCLFVI FCLVAAMILY VTPFKIIALA GGMFWMRHPK FRSKMPSAPS NFFRKLPSKA DCML

Arabidopsis Description

FTIP1FT-interacting protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.