CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32998	Soybean	cytosol	96.98	96.86
GSMUA_Achr1P16560_001	Banana	endoplasmic reticulum, plasma membrane	27.39	82.26
Bra005915.1-P	Field mustard	cytosol	80.9	81.21
CDX81020	Canola	cytosol	40.7	81.2
AT5G06850.1	Thale cress	cytosol	80.78	80.98
CDY70344	Canola	cytosol	51.01	80.56
PGSC0003DMT400046026	Potato	cytosol	78.27	78.76
Solyc03g077920.1.1	Tomato	cytosol	77.76	78.45
CDX81021	Canola	cytosol	26.88	74.56
GSMUA_Achr1P16550_001	Banana	cytosol	31.91	74.49
VIT_02s0087g00450.t01	Wine grape	extracellular	8.67	74.19
GSMUA_Achr9P27720_001	Banana	mitochondrion	44.6	72.6
KRH13902	Soybean	mitochondrion	73.49	72.22
KRH43469	Soybean	mitochondrion	72.99	71.64
TraesCS7B01G481700.1	Wheat	cytosol	11.31	71.43
Zm00001d036804_P001	Maize	cytosol	59.67	70.27
EER90045	Sorghum	cytosol	70.6	69.13
TraesCS7A01G403500.1	Wheat	cytosol	70.1	68.63
TraesCS7B01G302900.1	Wheat	cytosol	69.72	68.35
TraesCS7D01G396900.1	Wheat	cytosol	69.85	68.3
HORVU7Hr1G094580.2	Barley	cytosol	69.72	68.01
KRG95352	Soybean	endoplasmic reticulum	65.95	67.74
KRH32992	Soybean	cytosol	65.58	67.53
KRH67030	Soybean	endoplasmic reticulum, mitochondrion, nucleus	65.58	67.35
Os06t0614000-01	Rice	cytosol	69.72	67.35
KRH29670	Soybean	cytosol	65.45	67.05
KRH23178	Soybean	cytosol	65.2	66.97
KRH10160	Soybean	cytosol	64.95	66.8
KRH65054	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	18.84	60.48
TraesCS2D01G333300.1	Wheat	cytosol	62.19	60.22
TraesCS2A01G329400.1	Wheat	cytosol	62.19	60.0
Zm00001d003321_P001	Maize	cytosol	62.44	57.59
KXG26530	Sorghum	cytosol	62.69	57.49
GSMUA_Achr3P11130_001	Banana	cytosol	49.87	55.37
Os04t0472900-01	Rice	cytosol	59.42	55.32
TraesCS2B01G352900.1	Wheat	mitochondrion	55.15	51.11
KRH77531	Soybean	plasma membrane	62.19	51.08
KRH48448	Soybean	cytosol	45.1	50.71
KRH36455	Soybean	cytosol	74.75	50.42
KRH39245	Soybean	cytosol	46.98	49.87
KRH27512	Soybean	cytosol	73.74	49.75
KRH27936	Soybean	cytosol	61.93	49.01
KRH23748	Soybean	nucleus	59.17	46.63
KRH43466	Soybean	plasma membrane	13.07	46.22
KRH44923	Soybean	nucleus	58.42	45.59
KRH65087	Soybean	endoplasmic reticulum, mitochondrion, nucleus	57.16	45.36
KRH48167	Soybean	endoplasmic reticulum, nucleus	56.78	45.11
KRH15602	Soybean	plasma membrane	43.72	44.9
KRH40482	Soybean	cytosol	55.15	43.21
KRH00708	Soybean	cytosol	54.27	42.48
KRH57988	Soybean	cytosol	47.99	39.3
KRH56956	Soybean	mitochondrion	50.25	39.02
KRH04520	Soybean	cytosol	47.49	38.3
KRH17620	Soybean	cytosol	45.73	36.08
HORVU2Hr1G082010.3	Barley	cytosol	28.39	23.57
KRH17608	Soybean	cytosol	9.42	19.33

Protein Annotations

EntrezGene:100814611	Gene3D:2.60.40.150	MapMan:35.1	EMBL:ACUP02001107	InterPro:C2_dom	InterPro:C2_domain_sf
EnsemblPlantsGene:GLYMA_02G176700	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892
UniProt:K7K960	EnsemblPlants:KRH71900	ProteinID:KRH71900	ProteinID:KRH71900.1	PFAM:PF00168	PFAM:PF08372
InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR10024	PANTHER:PTHR10024:SF236	SMART:SM00239	SUPFAM:SSF49562
TMHMM:TMhelix	UniParc:UPI0002336CD1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:28969705..28972870

Molecular Weight (calculated)

91258.2 Da

IEP (calculated)

9.407

GRAVY (calculated)

-0.290

Length

796 amino acids

Sequence
(BLAST)

001: MSSSQAAPKG NQEDYKLKDT KPELGEKWPH GGQRGGSGWI YNERATSTYD LVEQMFYLYV RVVKAKDLPP NPVTSNVDPY VEVKVGNYKG KTRHFEKKTS
101: PEWKQVFAFS KEKIQSSVVE VFVRDKEMVA RDDYIGKVEF DIHEVPTRVP PDSPLAPQWY RLENLRGEAR SRGEIMLAVW MGTQADEAFP EAWHSDSASV
201: KGDGVYNIRS KVYVNPKLWY LRVNVIEAQD VEPNDKSQPP QVFVKGQVGQ QVLKTKLCPT KTPNPMWNED LVFVAAEPFE EKLVLTVENK ASPGKDEVAA
301: RISLPLNKFE ILLDHRAVHS HWYNLERFGF GVLEGDKRNE SKFSSRIHLR VCLEGAYHVL DESTMYISDT RPTARQLWKQ PIGILEVGIL SAQGLQSMKT
401: NNGKGSTDAY CVAKYGQKWV RTRTITESFN PKWNEQYTWE VYDPCTVITF GVFDNCHLGG GGGQTQVAKV DSKIGKVRIR LSTLEMDRIY TNSYPLLVLK
501: TSGLKKMGEL QLAIRFTCLS MAHIIYLYGH PLLPKMHYLH PFTVNQLDSL RYQAMNIVVV RLGRAEPPLR KEVVEYMLDV DSHIWSMRRS KANFFRIVSL
601: FSGAISMSKW LGEVQQWKNP VTTILVHVLF FILICYPELI LPTMFLYMFL IGIWNFRFRP RHPPHMDTKL SWAEAAHPDE LDEEFDTFPT SKAQDVIRMR
701: YDRLRSVAGR IQTVVGDIAT QGERFHALLS WRDPRATSLF VIFCLVVAVA LYVTPFKVVA SVAGIFWLRH PRFRSKLPSM PSNFFKRLPS CVDGML

Best Arabidopsis Sequence Match ( AT5G06850.1 )
(BLAST)

001: MAAKDGAKSQ EDYKLKDMKP ELGERWPHGG QRGGTGWIGS ERAASTYDLV EQMFYLYVRV VKAKDLPPNP VTSNCDPYVE VKIGNYKGKT KHFEKRTNPE
101: WNQVFAFSKD KVQSSTVEVF VRDKEMVTRD EYIGKVVFDM REVPTRVPPD SPLAPQWYRL EDRRGESKKR GEVMVAVWLG TQADEAFPDA WHSDASSVQG
201: EGVQSVRSKV YVSPKLWYLR VNVIEAQDVE PSDRSQPPQA FVKVQVGNQI LKTKLCPNKT TNPMWNEDLV FVAAEPFEEQ FFLTVENKVT PAKDEVMGRL
301: ISPLSVFEKR LDHRAVHSKW YNLEKFGFGA LEGDKRHELK FSSRIHLRVC LEGGYHVMDE STLYISDVKP TARQLWKSPI GILEVGILSA QGLSPMKTKD
401: GKATTDPYCV AKYGQKWVRT RTIIDSSSPK WNEQYTWEVY DPCTVITLGV FDNCHLGGSE KSNSGAKVDS RIGKVRIRLS TLEADRIYTH SYPLLVLQTK
501: GLKKMGEVQL AVRFTCLSLA HMIYLYGHPL LPKMHYLHPF TVNQLDSLRY QAMSIVAARL SRAEPPLRKE NVEYMLDVDS HMWSMRRSKA NFFRIVSVFA
601: GLIAMSKWLG DVCYWKNPLT TILFHVLFFI LICYPELILP TTFLYMFLIG LWNFRFRPRH PAHMDTKVSW AEAASPDELD EEFDTFPTSK GQDVVKMRYD
701: RLRSVAGRIQ MVVGDIATQG ERFQALLSWR DPRATCLFVI FCLVAAMILY VTPFKIIALA GGMFWMRHPK FRSKMPSAPS NFFRKLPSKA DCML

Arabidopsis Description

FTIP1FT-interacting protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL59]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.