CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g05700.t01	Wine grape	cytosol	74.44	75.62
PGSC0003DMT400065217	Potato	cytosol	76.1	74.5
Solyc03g113190.1.1	Tomato	cytosol	76.0	74.4
CDX85853	Canola	cytosol	73.85	72.51
CDX68168	Canola	cytosol	73.66	72.25
Bra003788.1-P	Field mustard	cytosol	73.76	72.14
AT1G74720.1	Thale cress	cytosol	74.63	70.77
EES03181	Sorghum	cytosol	62.93	59.67
TraesCS7A01G491900.1	Wheat	cytosol	62.83	59.41
TraesCS7D01G478500.1	Wheat	cytosol	62.83	59.35
TraesCS7B01G397000.1	Wheat	cytosol	62.63	59.17
Zm00001d011239_P001	Maize	cytosol, mitochondrion, plasma membrane	62.34	58.95
Os01t0587300-00	Rice	cytosol	61.85	58.7
HORVU7Hr1G110440.4	Barley	cytosol, plastid	61.56	58.26
KRH32992	Soybean	cytosol	40.0	53.04
KRG95352	Soybean	endoplasmic reticulum	40.0	52.9
KRH67030	Soybean	endoplasmic reticulum, mitochondrion, nucleus	40.0	52.9
KRH65054	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	12.78	52.82
KRH29670	Soybean	cytosol	38.63	50.97
KRH23178	Soybean	cytosol	38.44	50.84
KRH10160	Soybean	cytosol	38.24	50.65
KRH13902	Soybean	mitochondrion	39.8	50.37
KRH71900	Soybean	endoplasmic reticulum	39.02	50.25
KRH32998	Soybean	cytosol	38.93	50.06
KRH43469	Soybean	mitochondrion	39.41	49.81
KRH17620	Soybean	cytosol	48.98	49.75
KRH57988	Soybean	cytosol	45.76	48.25
KRH04520	Soybean	cytosol	46.24	48.02
KRH27936	Soybean	cytosol	45.17	46.02
KRH48448	Soybean	cytosol	31.71	45.9
KRH43466	Soybean	plasma membrane	10.05	45.78
KRH23748	Soybean	nucleus	44.39	45.05
KRH44923	Soybean	nucleus	44.29	44.51
KRH77531	Soybean	plasma membrane	41.95	44.38
KRH39245	Soybean	cytosol	32.39	44.27
KRH65087	Soybean	endoplasmic reticulum, mitochondrion, nucleus	43.02	43.97
KRH48167	Soybean	endoplasmic reticulum, nucleus	42.93	43.91
KRH00708	Soybean	cytosol	41.85	42.18
KRH40482	Soybean	cytosol	41.66	42.03
KRH36455	Soybean	cytosol	46.44	40.34
KRH27512	Soybean	cytosol	46.15	40.08
KRH15602	Soybean	plasma membrane	29.76	39.35
KRH17608	Soybean	cytosol	14.05	37.11

Protein Annotations

EntrezGene:100783882	Gene3D:2.60.40.150	MapMan:35.1	EMBL:ACUP02002803	InterPro:C2_dom	InterPro:C2_domain_sf
ncoils:Coil	EnsemblPlantsGene:GLYMA_05G029600	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0007275
GO:GO:0008150	GO:GO:0009506	GO:GO:0016020	GO:GO:0016021	GO:GO:0099402	UniProt:I1JZS2
InterPro:IPR000008	InterPro:IPR035892	EnsemblPlants:KRH56956	ProteinID:KRH56956	ProteinID:KRH56956.1	PFAM:PF00168
PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR10024	PANTHER:PTHR10024:SF271	SMART:SM00239
SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI00023399CA	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:+:2539243..2542869

Molecular Weight (calculated)

116522.0 Da

IEP (calculated)

7.726

GRAVY (calculated)

-0.373

Length

1025 amino acids

Sequence
(BLAST)

0001: MMTTPFQQPP QTVRRLVVEV VDARNLLPKD GQGSSSPYVV ADFDGQRKRT TTRFKELNPV WNEPLEFIVS DPENMEFEEL EVEVYNDKKF GNGSGRKNHF
0101: LGRVKLYGTQ FSRRGEEALV YYTLEKRSVF SWIRGEIGLR IYYYDEMLME EEKPPPPPQQ QQEEQGERTE QDRNKPPPGV VVVEEGRVFE APGAMEQCVP
0201: LPSGPPHSPR VVVVAESPPP VVHVSQDPPL AEMCEPPASE MQFHPEVRKM QANRGNRVKI LKRPNGDYLP KDISGKKTGN ESERVHPFDL VEPMQYLFVK
0301: IWKARGLAPP SEGPIVRVRM SSQSRRSNPA SYRPSEPPDS PEWNQTFALS YNNTNDANSA TLEISVWDSP TENFLGGVCF DLSDVPVRDP PDSPLAPQWY
0401: RLEGGTADQN PGRVSGDIQL SVWIGTQSDD AFPEAWISDA PYVAHTRSKV YQSPKLWYLR VTVVEAQDLN IAPNLPPLTA PEVRVKVELG FQSQRTRRGS
0501: MNHRSLSFHW NEDLLFVAGE PLEDSVIVLL EDRTTKEPAL LGHIVIPLSS IEQRIDERHV AAKWFTLEGG PYCGRVQMRL CLEGGYHVLD EAAHVCSDFR
0601: PTAKQLWKPA VGILELGILG ARGLLPMKSK GGGKGSTDAY CVAKYGKKWV RTRTVTDTFD PRWNEQYTWQ VYDPCTVLTV GVFDNWRMFA DVSEDHRPDC
0701: RIGKVRIRVS TLESNRIYTN SYPLLVLTRT GLKKMGEIEL AVRFACPSLL PDTCAVYAQP LLPRMHYLRP LGVAQQEALR GASTKMVAQW LARSEPPLGH
0801: EVVRYMLDAD SHVWSMRKSK ANWFRIVAVL AWAVGLAKWL DDIRRWKNPV TTVLLHILYL VLVWYPDLIV PTAFLYVVLI GIWYYRFRPK IPAGMDTRLS
0901: QAEAVDPDEL DEEFDTMPSS KPPDVIRMRY DRLRMLAARV QTVLGDFATQ GERLQALVSW RDPRATKLFI GVCLTITVAL YAMPPKMVAV ALGFYYLRHP
1001: MFRNPMPSAT LNFFRRLPSL SDRLM

Best Arabidopsis Sequence Match ( AT1G74720.1 )
(BLAST)

0001: MNTTPFHSDP PPSRIQRKLV VEVVEARNIL PKDGQGSSSA YVVVDFDAQK KRTSTKFRDL NPIWNEMLDF AVSDPKNMDY DELDIEVYND KRFGNGGGRK
0101: NHFLGRVKIY GSQFSRRGEE GLVYFPLEKK SVFSWIRGEI GLKIYYYDEA ADEDTAGGGG GQQQQQQQQQ FHPPQQEADE QQHQQQFHPP PQQMMNIPPE
0201: KPNVVVVEEG RVFESAQSQR YTETHQQPPV VIVEESPPQH VMQGPNDNHP HRNDNHPQRP PSPPPPPSAG EVHYYPPEVR KMQVGRPPGG DRIRVTKRPP
0301: NGDYSPRVIN SKTGGGETTM EKKTHHPYNL VEPMQYLFVR IVKARGLPPN ESAYVKVRTS NHFVRSKPAV NRPGESVDSP EWNQVFALGH NRSDSAVTGA
0401: TLEISAWDAS SESFLGGVCF DLSEVPVRDP PDSPLAPQWY RLEGSGADQN SGRISGDIQL SVWIGTQVDE AFPEAWSSDA PHVAHTRSKV YQSPKLWYLR
0501: VTVLEAQDLH IAPNLPPLTA PEIRVKAQLG FQSARTRRGS MNNHSGSFHW HEDMIFVAGE PLEDCLVLMV EDRTTKEATL LGHAMIPVSS IEQRIDERFV
0601: PSKWHTLEGE GGGGGGGGGP GGGGGGGPYC GRISLRLCLE GGYHVLEEAA HVCSDFRPTA KQLWKPPIGI LELGILGARG LLPMKAKNGG KGSTDAYCVA
0701: KYGKKWVRTR TITDSFDPRW HEQYTWQVYD PCTVLTVGVF DNWRMFSDAS DDRPDTRIGK IRIRVSTLES NKVYTNSYPL LVLLPSGMKK MGEIEVAVRF
0801: ACPSLLPDVC AAYGQPLLPR MHYIRPLGVA QQDALRGAAT KMVAAWLARA EPPLGPEVVR YMLDADSHAW SMRKSKANWY RIVGVLAWAV GLAKWLDNIR
0901: RWRNPVTTVL VHILYLVLVW YPDLVVPTAF LYVVMIGVWY YRFRPKIPAG MDIRLSQAET VDPDELDEEF DTIPSSRRPE VIRARYDRLR ILAVRVQTIL
1001: GDFAAQGERI QALVSWRDPR ATKLFIAICL VITIVLYAVP AKMVAVALGF YYLRHPMFRD TMPTASLNFF RRLPSLSDRL I

Arabidopsis Description

QKYProtein QUIRKY [Source:UniProtKB/Swiss-Prot;Acc:B8XCH5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.