CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011239_P001	Maize	cytosol, mitochondrion, plasma membrane	96.21	95.94
Os01t0587300-00	Rice	cytosol	88.34	88.43
TraesCS7D01G478500.1	Wheat	cytosol	87.33	87.0
TraesCS7A01G491900.1	Wheat	cytosol	87.14	86.9
TraesCS7B01G397000.1	Wheat	cytosol	87.05	86.73
HORVU7Hr1G110440.4	Barley	cytosol, plastid	85.66	85.5
GSMUA_Achr1P14480_001	Banana	cytosol	50.32	66.67
VIT_17s0000g05700.t01	Wine grape	cytosol	60.5	64.82
KRH56956	Soybean	mitochondrion	59.67	62.93
CDX68168	Canola	cytosol	60.78	62.87
CDX85853	Canola	cytosol	60.59	62.74
Bra003788.1-P	Field mustard	cytosol	60.78	62.69
Solyc03g113190.1.1	Tomato	cytosol	60.68	62.66
PGSC0003DMT400065217	Potato	cytosol	60.68	62.66
AT1G74720.1	Thale cress	cytosol	60.78	60.78
GSMUA_Achr8P04150_001	Banana	cytosol	26.92	59.63
CDX80994	Canola	cytosol	5.09	53.4
EER90047	Sorghum	cytosol	37.65	52.52
EER90045	Sorghum	cytosol	35.99	47.85
EES19579	Sorghum	plastid	34.32	45.92
OQU88487	Sorghum	cytosol	45.42	45.51
CDX98964	Canola	endoplasmic reticulum, extracellular	5.92	45.39
OQU91253	Sorghum	cytosol, nucleus, plasma membrane	43.48	45.37
KXG27468	Sorghum	cytosol	42.0	44.86
KXG26530	Sorghum	cytosol	35.89	44.7
EES05763	Sorghum	cytosol	31.08	43.3
OQU82647	Sorghum	cytosol, nucleus, plasma membrane	41.07	43.23
EES07745	Sorghum	cytosol	40.43	43.1
EER99386	Sorghum	cytosol	39.5	42.45
KXG27914	Sorghum	cytosol	34.04	36.84
CDX80993	Canola	extracellular	2.5	30.34

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	EntrezGene:8082451	InterPro:C2_dom	InterPro:C2_domain_sf	UniProt:C5XPG4
EnsemblPlants:EES03181	ProteinID:EES03181	ProteinID:EES03181.1	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0007275	GO:GO:0008150	GO:GO:0009506	GO:GO:0016020	GO:GO:0016021	GO:GO:0099402
InterPro:IPR000008	InterPro:IPR035892	PFAM:PF00168	PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004
PANTHER:PTHR10024	PANTHER:PTHR10024:SF271	SMART:SM00239	EnsemblPlantsGene:SORBI_3003G201100	SUPFAM:SSF49562	TMHMM:TMhelix
UniParc:UPI0001A84E38	RefSeq:XP_002458061.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:52994762..52998007

Molecular Weight (calculated)

119459.0 Da

IEP (calculated)

7.915

GRAVY (calculated)

-0.296

Length

1081 amino acids

Sequence
(BLAST)

0001: MAAGGGGGGP PPPGPPPMVR RLAVEVVDAR DLVPKDGLGT SSAFAVVDFD GQRKRTRTVP RDLSPQWHER LEFVVHDPPN MHAEALDISL YHDRRFNPSG
0101: GGGGGSRKNH FLGRVHIYGS QFSRRGEEGI VYFPLEKRSL ISWIRGEIGL KIYYYDEPAV MPPPPEEKPP EQADNAPPPE VPPEAPRELP DMPAPTEAAV
0201: EVQQPAAQPP IIIVEEAPMH PPMMMPPPMH GPHGPMMPPP MHGPHGPMMP PPVHGAHGPM TPPPQPEPES APEPESGDQY PPEVRKTRMA TERVRVVRHP
0301: SGGLGPDYYA PSPRVIPGRF VSTGESVEPV QSSSYDLVEP MRYLFVRVVR VRGIRACEGP YVKVQAGPHS LRSRPGRDVS GTGNPEWNQV FAISHARPEP
0401: TLEISVWDGG APSPAEAFLG GVCFDLSDVP VRDQPDGPLA PQWYRLEGGE PGMVTGDIMV AVWIGTQADD AFPEAWNTDA PYAAYTRSKV YQSPKLWYLR
0501: ASVIEAQDLR VPAPPPGLPF DVRVKIQLGF QSARTRRSVA SSSGSAFAWS EDLMFVASEP LDDSLIVLVE DRSMIKEPAL LGHATIPVTT IEQRLDERQI
0601: VASRWFTLEG GTSGIGMMPP GNAGGPPAFY SGRLHLRLCL EGGYHVLDEA AHVCSDYRPT AKQLWKPPVG VLELGIIGAC GLLPMKTKGG AKGSTDAYCV
0701: AKYGKKWVRT RTITDSLNPR WNEQYTWQVY DPCTVLTVAV FDNWRMFAGP GAGDERQDYR IGKVRVRVST LESNRAYTAS YPLLVLLRSG LKKMGEVQLA
0801: VRFSSPAQLP DTWATYTTPL LPRMHYLRPI GVAQQEALRG AAVRTVATWL ARSEPPLGPE VVKYMLDADA HTWSVRRAKA NWFRIMGVLA WAVGLARWLD
0901: GVQRWRNPST TVLVHALYLV LVWYPELVVP TASLYVFMIG VWYYRFRPRG PAGMDARLSQ ADTVDGDELE EEFDPVPPPE VLRLRYERLR TLAGRVQRVM
1001: GDVAAQGERL QALVSWRDPR ASRIFVGVSF AVAVALYAMP PKMVAVASGF YYLRHPMFRD PMPPPAVNFF RRLPSLSDRL L

Best Arabidopsis Sequence Match ( AT1G74720.1 )
(BLAST)

0001: MNTTPFHSDP PPSRIQRKLV VEVVEARNIL PKDGQGSSSA YVVVDFDAQK KRTSTKFRDL NPIWNEMLDF AVSDPKNMDY DELDIEVYND KRFGNGGGRK
0101: NHFLGRVKIY GSQFSRRGEE GLVYFPLEKK SVFSWIRGEI GLKIYYYDEA ADEDTAGGGG GQQQQQQQQQ FHPPQQEADE QQHQQQFHPP PQQMMNIPPE
0201: KPNVVVVEEG RVFESAQSQR YTETHQQPPV VIVEESPPQH VMQGPNDNHP HRNDNHPQRP PSPPPPPSAG EVHYYPPEVR KMQVGRPPGG DRIRVTKRPP
0301: NGDYSPRVIN SKTGGGETTM EKKTHHPYNL VEPMQYLFVR IVKARGLPPN ESAYVKVRTS NHFVRSKPAV NRPGESVDSP EWNQVFALGH NRSDSAVTGA
0401: TLEISAWDAS SESFLGGVCF DLSEVPVRDP PDSPLAPQWY RLEGSGADQN SGRISGDIQL SVWIGTQVDE AFPEAWSSDA PHVAHTRSKV YQSPKLWYLR
0501: VTVLEAQDLH IAPNLPPLTA PEIRVKAQLG FQSARTRRGS MNNHSGSFHW HEDMIFVAGE PLEDCLVLMV EDRTTKEATL LGHAMIPVSS IEQRIDERFV
0601: PSKWHTLEGE GGGGGGGGGP GGGGGGGPYC GRISLRLCLE GGYHVLEEAA HVCSDFRPTA KQLWKPPIGI LELGILGARG LLPMKAKNGG KGSTDAYCVA
0701: KYGKKWVRTR TITDSFDPRW HEQYTWQVYD PCTVLTVGVF DNWRMFSDAS DDRPDTRIGK IRIRVSTLES NKVYTNSYPL LVLLPSGMKK MGEIEVAVRF
0801: ACPSLLPDVC AAYGQPLLPR MHYIRPLGVA QQDALRGAAT KMVAAWLARA EPPLGPEVVR YMLDADSHAW SMRKSKANWY RIVGVLAWAV GLAKWLDNIR
0901: RWRNPVTTVL VHILYLVLVW YPDLVVPTAF LYVVMIGVWY YRFRPKIPAG MDIRLSQAET VDPDELDEEF DTIPSSRRPE VIRARYDRLR ILAVRVQTIL
1001: GDFAAQGERI QALVSWRDPR ATKLFIAICL VITIVLYAVP AKMVAVALGF YYLRHPMFRD TMPTASLNFF RRLPSLSDRL I

Arabidopsis Description

QKYProtein QUIRKY [Source:UniProtKB/Swiss-Prot;Acc:B8XCH5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.