Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G478500.1 | Wheat | cytosol | 98.53 | 98.53 |
| TraesCS7A01G491900.1 | Wheat | cytosol | 97.97 | 98.06 |
| HORVU7Hr1G110440.4 | Barley | cytosol, plastid | 95.39 | 95.57 |
| Zm00001d011239_P001 | Maize | cytosol, mitochondrion, plasma membrane | 87.83 | 87.92 |
| EES03181 | Sorghum | cytosol | 86.73 | 87.05 |
| Os01t0587300-00 | Rice | cytosol | 85.44 | 85.83 |
| GSMUA_Achr1P14480_001 | Banana | cytosol | 49.31 | 65.56 |
| VIT_17s0000g05700.t01 | Wine grape | cytosol | 59.26 | 63.73 |
| KRH56956 | Soybean | mitochondrion | 59.17 | 62.63 |
| CDX68168 | Canola | cytosol | 59.63 | 61.91 |
| CDX85853 | Canola | cytosol | 59.35 | 61.69 |
| Bra003788.1-P | Field mustard | cytosol | 59.54 | 61.64 |
| PGSC0003DMT400065217 | Potato | cytosol | 59.35 | 61.51 |
| Solyc03g113190.1.1 | Tomato | cytosol | 59.35 | 61.51 |
| AT1G74720.1 | Thale cress | cytosol | 59.82 | 60.04 |
| GSMUA_Achr8P04150_001 | Banana | cytosol | 26.36 | 58.61 |
| TraesCS7B01G481700.1 | Wheat | cytosol | 6.45 | 55.56 |
| CDX80994 | Canola | cytosol | 5.07 | 53.4 |
| TraesCS5B01G171600.1 | Wheat | cytosol | 37.51 | 52.79 |
| TraesCS5B01G265100.1 | Wheat | cytosol | 36.59 | 51.29 |
| CDX98964 | Canola | endoplasmic reticulum, extracellular | 6.36 | 48.94 |
| TraesCS1B01G279300.1 | Wheat | mitochondrion | 33.55 | 47.27 |
| TraesCS7B01G302900.1 | Wheat | cytosol | 35.12 | 46.92 |
| TraesCS2B01G621600.1 | Wheat | cytosol | 22.21 | 46.89 |
| TraesCS5B01G484400.1 | Wheat | cytosol | 44.15 | 46.33 |
| TraesCS4B01G013400.1 | Wheat | cytosol | 44.42 | 45.95 |
| TraesCS2B01G605000.1 | Wheat | cytosol | 41.38 | 44.19 |
| TraesCS6B01G426600.1 | Wheat | cytosol | 40.18 | 43.13 |
| TraesCS6B01G277900.1 | Wheat | cytosol | 30.41 | 42.47 |
| TraesCS2B01G622500.1 | Wheat | cytosol, nucleus, plasma membrane | 39.08 | 40.89 |
| TraesCS2B01G261000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 39.26 | 40.88 |
| TraesCS2B01G352900.1 | Wheat | mitochondrion | 31.61 | 39.93 |
| TraesCS3B01G438300.1 | Wheat | plastid | 28.2 | 30.63 |
| CDX80993 | Canola | extracellular | 2.4 | 29.21 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G397000.1 | EnsemblPlantsGene:TraesCS7B01G397000 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | InterPro:PRibTrfase_C | PANTHER:PTHR10024 | PANTHER:PTHR10024:SF271 | PFAM:PF00168 | PFAM:PF08372 |
| PFscan:PS50004 | SEG:seg | SMART:SM00239 | SUPFAM:SSF49562 | TIGR:cd04022 | TIGR:cd08378 |
| TIGR:cd08379 | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7B:+:663486359..663489616
Molecular Weight (calculated)
120165.0 Da
IEP (calculated)
7.319
GRAVY (calculated)
-0.337
Length
1085 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADGGPPPHA QMVRRLAVEV VDARDLVPKD GLGTSSAYAV ADFDGQRKRT RTVPRDLNPQ WHERLEFAVP DPAGMHAESL DVSLYHDRRF NPSGGGGGGA
0101: GGGKNHFLGR VRIYGSQFSR RGEEGIVYFP LEKRSLLSWI RGEVGLKIYY YDEPAVPPPP PPEDRPPEGA DNAPPPEVPP EQPREPPPEL PEPTEAAVEV
0201: QQPQAQPPVI IVEEAPMHGP HGPMMPPPMM HGHMMPPPMH GPHGPMMHGP MMHARMMPPQ PEPEPEPQPQ REPGPGPDGA EMYPPELRKE RMASSNGHVR
0301: VPRHPSGGFG PDYYTAASPR VISGRFASAG EAVEPVQSTY DLVEPMRYLF VRIVRVRGIR ACEGPYVKIQ AGPHCLRSRP GRDVSGTGIP EWNQVFAISH
0401: AKPEPTLEIS VWDGGAPSPT DAFLGGVCFD LSDVPVRDQP DGPLAAQWYR LEGGEPGMVT GDIMVSVWIG TQADDVFPEA WNTDAPYAAY TRAKVYQSPK
0501: LWYLRASIIE AQDLRVPSPP PGLPFDVRVK VQLGFQSART RRSVASSSGS AFAWSEDLMF VASEPLDDTL VLLVEDRSMI REPALLGHAT IPVSSVEQRL
0601: DERQIVASRW FNLEGGMGHG DGGGGDQQGQ PGPGFYSGRL HLRLSLEGGY HVLDEAAHVC SDYRPTAKQL WKPPVGVLEL GIVGACGLLP MKTKGGSKGS
0701: TDAYCVAKYG KKWVRTRTVT DSFNPRWNEQ YTWQVYDPCT VLTVAVFDNW RMFAGAGDER QDYRIGKVRV RVSTLETNRA YTASYPLLVL LRPGLKKMGE
0801: VQLAVRFSSP AHLPDTWATY TSPLLPRMHY LRPIGVAQQE ALRGAAVRTV AAWLARSEPP LGPEVVRYML DADAHTWSVR RAKANWFRIM GVLAWAVGLE
0901: RWLDGVRRWR NPSTTVLLHV LYLVLVWYPE LVVPTASLYV FLIGVWYYRF RPRAPAGMDA RLSQADTVDG DELEEEFDAV SAPDVLRLRY ERLRTLAGRV
1001: QRVMGDVAAQ GERLQALVSW RDPRASRIFV GVCLAVAVAL YAMPPKMVAV ASGFYYLRHP MFRDPMPAAA VNFFRRLPSL SDRML
0101: GGGKNHFLGR VRIYGSQFSR RGEEGIVYFP LEKRSLLSWI RGEVGLKIYY YDEPAVPPPP PPEDRPPEGA DNAPPPEVPP EQPREPPPEL PEPTEAAVEV
0201: QQPQAQPPVI IVEEAPMHGP HGPMMPPPMM HGHMMPPPMH GPHGPMMHGP MMHARMMPPQ PEPEPEPQPQ REPGPGPDGA EMYPPELRKE RMASSNGHVR
0301: VPRHPSGGFG PDYYTAASPR VISGRFASAG EAVEPVQSTY DLVEPMRYLF VRIVRVRGIR ACEGPYVKIQ AGPHCLRSRP GRDVSGTGIP EWNQVFAISH
0401: AKPEPTLEIS VWDGGAPSPT DAFLGGVCFD LSDVPVRDQP DGPLAAQWYR LEGGEPGMVT GDIMVSVWIG TQADDVFPEA WNTDAPYAAY TRAKVYQSPK
0501: LWYLRASIIE AQDLRVPSPP PGLPFDVRVK VQLGFQSART RRSVASSSGS AFAWSEDLMF VASEPLDDTL VLLVEDRSMI REPALLGHAT IPVSSVEQRL
0601: DERQIVASRW FNLEGGMGHG DGGGGDQQGQ PGPGFYSGRL HLRLSLEGGY HVLDEAAHVC SDYRPTAKQL WKPPVGVLEL GIVGACGLLP MKTKGGSKGS
0701: TDAYCVAKYG KKWVRTRTVT DSFNPRWNEQ YTWQVYDPCT VLTVAVFDNW RMFAGAGDER QDYRIGKVRV RVSTLETNRA YTASYPLLVL LRPGLKKMGE
0801: VQLAVRFSSP AHLPDTWATY TSPLLPRMHY LRPIGVAQQE ALRGAAVRTV AAWLARSEPP LGPEVVRYML DADAHTWSVR RAKANWFRIM GVLAWAVGLE
0901: RWLDGVRRWR NPSTTVLLHV LYLVLVWYPE LVVPTASLYV FLIGVWYYRF RPRAPAGMDA RLSQADTVDG DELEEEFDAV SAPDVLRLRY ERLRTLAGRV
1001: QRVMGDVAAQ GERLQALVSW RDPRASRIFV GVCLAVAVAL YAMPPKMVAV ASGFYYLRHP MFRDPMPAAA VNFFRRLPSL SDRML
0001: MNTTPFHSDP PPSRIQRKLV VEVVEARNIL PKDGQGSSSA YVVVDFDAQK KRTSTKFRDL NPIWNEMLDF AVSDPKNMDY DELDIEVYND KRFGNGGGRK
0101: NHFLGRVKIY GSQFSRRGEE GLVYFPLEKK SVFSWIRGEI GLKIYYYDEA ADEDTAGGGG GQQQQQQQQQ FHPPQQEADE QQHQQQFHPP PQQMMNIPPE
0201: KPNVVVVEEG RVFESAQSQR YTETHQQPPV VIVEESPPQH VMQGPNDNHP HRNDNHPQRP PSPPPPPSAG EVHYYPPEVR KMQVGRPPGG DRIRVTKRPP
0301: NGDYSPRVIN SKTGGGETTM EKKTHHPYNL VEPMQYLFVR IVKARGLPPN ESAYVKVRTS NHFVRSKPAV NRPGESVDSP EWNQVFALGH NRSDSAVTGA
0401: TLEISAWDAS SESFLGGVCF DLSEVPVRDP PDSPLAPQWY RLEGSGADQN SGRISGDIQL SVWIGTQVDE AFPEAWSSDA PHVAHTRSKV YQSPKLWYLR
0501: VTVLEAQDLH IAPNLPPLTA PEIRVKAQLG FQSARTRRGS MNNHSGSFHW HEDMIFVAGE PLEDCLVLMV EDRTTKEATL LGHAMIPVSS IEQRIDERFV
0601: PSKWHTLEGE GGGGGGGGGP GGGGGGGPYC GRISLRLCLE GGYHVLEEAA HVCSDFRPTA KQLWKPPIGI LELGILGARG LLPMKAKNGG KGSTDAYCVA
0701: KYGKKWVRTR TITDSFDPRW HEQYTWQVYD PCTVLTVGVF DNWRMFSDAS DDRPDTRIGK IRIRVSTLES NKVYTNSYPL LVLLPSGMKK MGEIEVAVRF
0801: ACPSLLPDVC AAYGQPLLPR MHYIRPLGVA QQDALRGAAT KMVAAWLARA EPPLGPEVVR YMLDADSHAW SMRKSKANWY RIVGVLAWAV GLAKWLDNIR
0901: RWRNPVTTVL VHILYLVLVW YPDLVVPTAF LYVVMIGVWY YRFRPKIPAG MDIRLSQAET VDPDELDEEF DTIPSSRRPE VIRARYDRLR ILAVRVQTIL
1001: GDFAAQGERI QALVSWRDPR ATKLFIAICL VITIVLYAVP AKMVAVALGF YYLRHPMFRD TMPTASLNFF RRLPSLSDRL I
0101: NHFLGRVKIY GSQFSRRGEE GLVYFPLEKK SVFSWIRGEI GLKIYYYDEA ADEDTAGGGG GQQQQQQQQQ FHPPQQEADE QQHQQQFHPP PQQMMNIPPE
0201: KPNVVVVEEG RVFESAQSQR YTETHQQPPV VIVEESPPQH VMQGPNDNHP HRNDNHPQRP PSPPPPPSAG EVHYYPPEVR KMQVGRPPGG DRIRVTKRPP
0301: NGDYSPRVIN SKTGGGETTM EKKTHHPYNL VEPMQYLFVR IVKARGLPPN ESAYVKVRTS NHFVRSKPAV NRPGESVDSP EWNQVFALGH NRSDSAVTGA
0401: TLEISAWDAS SESFLGGVCF DLSEVPVRDP PDSPLAPQWY RLEGSGADQN SGRISGDIQL SVWIGTQVDE AFPEAWSSDA PHVAHTRSKV YQSPKLWYLR
0501: VTVLEAQDLH IAPNLPPLTA PEIRVKAQLG FQSARTRRGS MNNHSGSFHW HEDMIFVAGE PLEDCLVLMV EDRTTKEATL LGHAMIPVSS IEQRIDERFV
0601: PSKWHTLEGE GGGGGGGGGP GGGGGGGPYC GRISLRLCLE GGYHVLEEAA HVCSDFRPTA KQLWKPPIGI LELGILGARG LLPMKAKNGG KGSTDAYCVA
0701: KYGKKWVRTR TITDSFDPRW HEQYTWQVYD PCTVLTVGVF DNWRMFSDAS DDRPDTRIGK IRIRVSTLES NKVYTNSYPL LVLLPSGMKK MGEIEVAVRF
0801: ACPSLLPDVC AAYGQPLLPR MHYIRPLGVA QQDALRGAAT KMVAAWLARA EPPLGPEVVR YMLDADSHAW SMRKSKANWY RIVGVLAWAV GLAKWLDNIR
0901: RWRNPVTTVL VHILYLVLVW YPDLVVPTAF LYVVMIGVWY YRFRPKIPAG MDIRLSQAET VDPDELDEEF DTIPSSRRPE VIRARYDRLR ILAVRVQTIL
1001: GDFAAQGERI QALVSWRDPR ATKLFIAICL VITIVLYAVP AKMVAVALGF YYLRHPMFRD TMPTASLNFF RRLPSLSDRL I
Arabidopsis Description
QKYProtein QUIRKY [Source:UniProtKB/Swiss-Prot;Acc:B8XCH5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.