Factsheet for TraesCS2B01G621600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G558400.1	Wheat	cytosol	85.6	60.52
TraesCS7B01G481700.1	Wheat	cytosol	14.59	59.52
TraesCS1B01G279300.1	Wheat	mitochondrion	59.34	39.61
TraesCS5B01G265100.1	Wheat	cytosol	53.89	35.79
TraesCS7B01G302900.1	Wheat	cytosol	55.84	35.34
TraesCS2B01G622500.1	Wheat	cytosol, nucleus, plasma membrane	70.23	34.81
TraesCS5B01G171600.1	Wheat	cytosol	51.95	34.63
Os04t0691800-01	Rice	plasma membrane	65.56	33.01
OQU82647	Sorghum	cytosol, nucleus, plasma membrane	65.76	32.91
Zm00001d002939_P001	Maize	cytosol, nucleus, plasma membrane	66.54	32.39
Solyc11g022400.1.1	Tomato	nucleus	55.45	30.35
TraesCS2B01G352900.1	Wheat	mitochondrion	50.39	30.15
CDY04800	Canola	cytosol	58.17	29.69
Bra024523.1-P	Field mustard	cytosol	58.56	29.63
CDY21373	Canola	cytosol	58.37	29.59
AT1G22610.1	Thale cress	cytosol	58.75	29.35
KRH44923	Soybean	nucleus	58.17	29.31
KRH23748	Soybean	nucleus	57.59	29.31
PGSC0003DMT400089685	Potato	cytosol	57.98	29.04
PGSC0003DMT400023971	Potato	cytosol	57.98	29.04
VIT_18s0072g01170.t01	Wine grape	cytosol	56.23	28.84
TraesCS6B01G277900.1	Wheat	cytosol	43.0	28.44
GSMUA_Achr3P22190_001	Banana	cytosol	45.72	27.45
GSMUA_Achr5P01190_001	Banana	cytosol	32.3	27.3
TraesCS2B01G605000.1	Wheat	cytosol	52.14	26.38
GSMUA_Achr10P...	Banana	cytosol	40.27	26.17
TraesCS6B01G426600.1	Wheat	cytosol	50.58	25.72
TraesCS2B01G261000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	50.39	24.86
TraesCS7B01G397000.1	Wheat	cytosol	46.89	22.21
TraesCS4B01G013400.1	Wheat	cytosol	43.77	21.45
TraesCS3B01G438300.1	Wheat	plastid	40.86	21.02
TraesCS5B01G484400.1	Wheat	cytosol	40.66	20.21
Solyc11g022460.1.1	Tomato	nucleus	21.4	14.88
TraesCSU01G020600.1	Wheat	cytosol	14.79	10.97

Protein Annotations

EnsemblPlants:TraesCS2B01G621600.1	EnsemblPlantsGene:TraesCS2B01G621600	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	InterPro:PRibTrfase_C	PANTHER:PTHR31425	PANTHER:PTHR31425:SF4	PFAM:PF00168	PFAM:PF08372
PFscan:PS50004	SEG:seg	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr2B:-:795978214..795980151

Molecular Weight (calculated)

59373.9 Da

IEP (calculated)

9.949

GRAVY (calculated)

-0.075

Length

514 amino acids

Sequence
(BLAST)

001: MGSQIMRTRP GQPQGSANPA WNEDFMFVVS EPFEDQLAVT VEEMVGHGRY EPIGRVIIPV ASPHVECNDL LVPVSSKWFS LSRGMTGSKI LLRMSLDTAY
101: HVLDERPDFK LRKSAIGILE VGILGARDLA AGVENPYVVA KYGRKWVRTR TLLNTTAPQW NEQHTWDVFD VSTVITMAVF NDSQGVANDQ RIGKVRVRVA
201: TLETDRMYTQ YYPLMALTRS RLKKMGQLQL AVRFTCKSWP KMLAMYGKPR LPKMHYTNPI TVRHMDYLRF EAMQMVATRL GRSEPPLPRE VVEYMLDVDS
301: DTFSLRRSKA NFYRLMALFS GIIVVWKWFD DVCKWKNPVT TILVNVVYLN LVCYPKLILP MGFLCFIMIV AWNYRQRPRN LPHMDAVLSH AELAHPEELD
401: EEFDTFPASR PADIVRMRYD GLRSIAGRVQ TVAGNLATQG ERLLFLPRWH DPRATTIYMM LLVITAVVLY LTPFRVVAMV IQLHFLRPPW FRSRTPNLIF
501: NFYRRLPSNQ DLML

Best Arabidopsis Sequence Match ( AT1G22610.1 )
(BLAST)

0001: MNKLVVEIVD ASDLMPKDGQ GSASPFVEVE FDEQRQRTQT RFKDLNPQWN EKLVFNVGDL KRLNNKTVDV TVYDDRRDNQ PGKFLGRVKI AGAVVPLSES
0101: ESGVQRYPLD KRGLFSNIKG DIALRIYAAP IDGGDFVSPP PDFAEKVMKE DKRFESQEFQ FQNQNQNQNH YEQFEDEINN METLKPTKKK EKESRTFHSI
0201: GAHAGGGGGA PPMSQAKQAY PPPPNQPEFR SDFMRAPGPP TGAVMQMQPP RQQNPEFQLI ETSPPLAARM RQSYYYRSSG DKTSSTYDLV EQMHYLYVSV
0301: VKARDLPVMD VSGSLDPYVE VKLGNYKGLT KHLEKNSNPI WKQIFAFSKE RLQSNLLEVT VKDKDLLTKD DFVGRVHIDL TEVPLRVPPD SPLAPQWYRL
0401: EDKKGMKTNR GEIMLAVWMG TQADESFPDA WHSDAHRVSH SNLSNTRSKV YFSPKLYYLR IHVMEAQDLV PSDKGRVPDA IVKIQAGNQM RATRTPQMRT
0501: MNPQWHEELM FVVSEPFEDM VIVSVDDRIG PGKDEILGRV FIPVRDVPVR QEVGKMPDPR WFNLQRHSMS MEEENEKRKE KFSSKILLRV CIEAGYHVLD
0601: ESTHFSSDLQ PSSKHLRKPS IGILELGILS ARNLMPMKGK DGRMTDPYCV AKYGNKWVRT RTLLDALAPK WNEQYTWEVH DPCTVITIGV FDNSHVNDGG
0701: DFKDQRIGKV RVRLSTLETD RVYTHFYPLL VLTPGGLKKN GELQLALRYT CTGFVNMMAQ YGRPLLPKMH YIQPIPVRHI DLLRHQAMQI VATRLSRSEP
0801: PLRREVVEYM LDVDYHMFSL RRSKANFSRI MSLLSSVTLV CKWFNDICTW RNPITTCLVH VLFLILVCYP ELILPTVFLY LFVIGMWNYR YRPRHPPHMD
0901: ARVSQADNAH PDELDEEFDT FPTSRPADIV RMRYDRLRSV GGRVQTVVGD LATQGERIQA LLSWRDPRAT ALFIVFALIW AVFIYVTPFQ VIAIIIGLFM
1001: LRHPRFRSRM PSVPANFFKR LPAKSDMLL

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKA3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.