Factsheet for GSMUA_Achr10P10540_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P22190_001	Banana	cytosol	82.43	76.17
GSMUA_Achr5P01190_001	Banana	cytosol	45.13	58.72
GSMUA_Achr1P09320_001	Banana	cytosol	43.49	58.7
GSMUA_Achr9P27720_001	Banana	mitochondrion	35.02	56.65
GSMUA_Achr2P03960_001	Banana	cytosol	48.8	55.3
GSMUA_Achr9P12510_001	Banana	cytosol	27.94	54.57
GSMUA_Achr1P16550_001	Banana	cytosol	23.26	53.96
EES19579	Sorghum	plastid	52.72	51.61
Zm00001d010202_P001	Maize	plasma membrane	52.34	51.17
Os05t0429700-01	Rice	plastid	51.83	50.99
GSMUA_AchrUn_...	Banana	cytosol	37.8	50.94
Zm00001d038340_P001	Maize	plasma membrane, plastid	52.09	50.93
TraesCS1B01G279300.1	Wheat	mitochondrion	49.56	50.91
GSMUA_Achr3P11130_001	Banana	cytosol	46.14	50.91
HORVU1Hr1G075050.2	Barley	mitochondrion	51.45	50.56
TraesCS1A01G268700.1	Wheat	plasma membrane, plastid	51.2	50.19
GSMUA_Achr1P00330_001	Banana	cytosol	28.7	50.11
TraesCS1D01G268800.1	Wheat	plasma membrane, plastid	51.07	50.06
OQU82647	Sorghum	cytosol, nucleus, plasma membrane	64.35	49.56
KRH44923	Soybean	nucleus	63.46	49.22
KRH23748	Soybean	nucleus	62.58	49.01
CDY04800	Canola	cytosol	62.33	48.96
Solyc11g022460.1.1	Tomato	nucleus	45.64	48.85
VIT_18s0072g01170.t01	Wine grape	cytosol	61.69	48.7
CDY21373	Canola	cytosol	62.33	48.62
Os04t0691800-01	Rice	plasma membrane	62.71	48.58
Bra024523.1-P	Field mustard	cytosol	62.2	48.43
AT1G22610.1	Thale cress	cytosol	61.95	47.62
PGSC0003DMT400089685	Potato	cytosol	61.57	47.47
PGSC0003DMT400023971	Potato	cytosol	61.57	47.47
TraesCS1A01G014300.1	Wheat	cytosol	47.41	47.41
Zm00001d002939_P001	Maize	cytosol, nucleus, plasma membrane	63.21	47.35
Solyc11g022400.1.1	Tomato	nucleus	56.01	47.18
GSMUA_Achr1P06800_001	Banana	cytosol	39.57	46.65
TraesCS2B01G622500.1	Wheat	cytosol, nucleus, plasma membrane	60.81	46.38
HORVU1Hr1G001710.1	Barley	mitochondrion	47.66	46.09
TraesCS2A01G557900.1	Wheat	cytosol, nucleus, plasma membrane	60.56	46.01
HORVU2Hr1G126730.1	Barley	cytosol, nucleus, plasma membrane	60.43	45.83
TraesCS2D01G571700.1	Wheat	cytosol, nucleus, plasma membrane	60.68	45.54
GSMUA_AchrUn_...	Banana	cytosol	52.34	44.14
TraesCS1D01G012500.1	Wheat	cytosol, peroxisome, plasma membrane	39.57	44.08
TraesCS2A01G558400.1	Wheat	cytosol	39.7	43.19
GSMUA_Achr10P...	Banana	mitochondrion	25.03	42.31
GSMUA_Achr3P14580_001	Banana	cytosol	36.79	41.04
TraesCS2B01G621600.1	Wheat	cytosol	26.17	40.27
GSMUA_Achr1P14480_001	Banana	cytosol	37.67	36.52
GSMUA_Achr8P04150_001	Banana	cytosol	22.25	36.07
GSMUA_Achr1P16560_001	Banana	endoplasmic reticulum, plasma membrane	12.01	35.85
GSMUA_Achr10P...	Banana	cytosol	20.99	32.68
TraesCSU01G020600.1	Wheat	cytosol	26.3	30.01
GSMUA_Achr10P...	Banana	mitochondrion	8.98	29.46
GSMUA_Achr9P10500_001	Banana	cytosol	23.64	28.95
GSMUA_Achr3P03790_001	Banana	cytosol	4.3	25.95

Protein Annotations

EnsemblPlants:GSMUA_Achr10P10540_001	EnsemblPlants:GSMUA_Achr10T10540_001	EnsemblPlantsGene:GSMUA_Achr10G10540_001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	InterPro:PRibTrfase_C	PANTHER:PTHR10024	PANTHER:PTHR10024:SF272	PFAM:PF00168
PFAM:PF08372	PFscan:PS50004	SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0002949BE1
UniProt:M0RH30	MapMan:35.1	:	:	:	:

Description

Putative C2 and GRAM domain-containing protein At1g03375 [Source:GMGC_GENE;Acc:GSMUA_Achr10G10540_001]

Coordinates

chr10:+:20124235..20127787

Molecular Weight (calculated)

88120.9 Da

IEP (calculated)

8.735

GRAVY (calculated)

-0.268

Length

791 amino acids

Sequence
(BLAST)

001: MKVAVEVVDA ADLMPKDGQG SANPFVEVEF EGQRQRTQTK AKDLSPAWNE TLLFNVADPA LIPHRTIDVC VYHERSRSAS LLGGGGGRHH PNFLGRVRVS
101: GVSVALSAAE AQVQRFPLEK RGIFSHIRGD IALRAYALPD AFSSSAAAAA APAPSPSAVA PDEPRVFYSI PASGATGGGV PPAPVMSVAS VAHARPEPPP
201: GAVVHVRPPA MARPGPEFGL VETAPPLASR LGYRGRDKIS STYDLVEQMR YLYVNVVKAR DLPTMDVTGA LDPYVEVKLG NYKGTTKHLE KNPNPVWRQV
301: FAFSRDRIQS SQLEVVVKDK DLVKDDFVGR LVFDLVDVPL RVPPDSPLAP QWYRLEDKKG DKLTRGELML AVWMGTQADE AFPDAWHSDA HSLGHQLRRT
401: RPVAGSVNPS WGEELMFVAS EPFDEPLVFT VEDRVAANKD EPLARLLLPV SAAYRRTDHN KAVESRWYNL AKPTAPKEEA VDGEKKEKFS SKIHLRLYLE
501: MGYHVLDEST HYSSDLQPAS KQLRKPSIGI LELGILSARN LIPMKAKDGR TTDAYCVAKY GSKWVRTRTL LDTLTPQWNE QYTWEVFDPC TVITVAVFDN
601: CHVTGHKDDV KDQRIGKVRI RLSTLEANRV YTHFYPLLVL QPSGLKKTGE LHLAVRFTCT AWVSMVTLYG KPLLPKMHYV QPISVLHMDY LRHQAMVIVS
701: TRLSRAEPPL RREVVEYMLD HMDTKLSHAE AALPDELDEE FDTFPTSKAM DVVVVVLIGL FLLRHPKLRS KAPSVPFNFY RRLPAKSDML L

Best Arabidopsis Sequence Match ( AT1G22610.1 )
(BLAST)

0001: MNKLVVEIVD ASDLMPKDGQ GSASPFVEVE FDEQRQRTQT RFKDLNPQWN EKLVFNVGDL KRLNNKTVDV TVYDDRRDNQ PGKFLGRVKI AGAVVPLSES
0101: ESGVQRYPLD KRGLFSNIKG DIALRIYAAP IDGGDFVSPP PDFAEKVMKE DKRFESQEFQ FQNQNQNQNH YEQFEDEINN METLKPTKKK EKESRTFHSI
0201: GAHAGGGGGA PPMSQAKQAY PPPPNQPEFR SDFMRAPGPP TGAVMQMQPP RQQNPEFQLI ETSPPLAARM RQSYYYRSSG DKTSSTYDLV EQMHYLYVSV
0301: VKARDLPVMD VSGSLDPYVE VKLGNYKGLT KHLEKNSNPI WKQIFAFSKE RLQSNLLEVT VKDKDLLTKD DFVGRVHIDL TEVPLRVPPD SPLAPQWYRL
0401: EDKKGMKTNR GEIMLAVWMG TQADESFPDA WHSDAHRVSH SNLSNTRSKV YFSPKLYYLR IHVMEAQDLV PSDKGRVPDA IVKIQAGNQM RATRTPQMRT
0501: MNPQWHEELM FVVSEPFEDM VIVSVDDRIG PGKDEILGRV FIPVRDVPVR QEVGKMPDPR WFNLQRHSMS MEEENEKRKE KFSSKILLRV CIEAGYHVLD
0601: ESTHFSSDLQ PSSKHLRKPS IGILELGILS ARNLMPMKGK DGRMTDPYCV AKYGNKWVRT RTLLDALAPK WNEQYTWEVH DPCTVITIGV FDNSHVNDGG
0701: DFKDQRIGKV RVRLSTLETD RVYTHFYPLL VLTPGGLKKN GELQLALRYT CTGFVNMMAQ YGRPLLPKMH YIQPIPVRHI DLLRHQAMQI VATRLSRSEP
0801: PLRREVVEYM LDVDYHMFSL RRSKANFSRI MSLLSSVTLV CKWFNDICTW RNPITTCLVH VLFLILVCYP ELILPTVFLY LFVIGMWNYR YRPRHPPHMD
0901: ARVSQADNAH PDELDEEFDT FPTSRPADIV RMRYDRLRSV GGRVQTVVGD LATQGERIQA LLSWRDPRAT ALFIVFALIW AVFIYVTPFQ VIAIIIGLFM
1001: LRHPRFRSRM PSVPANFFKR LPAKSDMLL

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKA3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.