Factsheet for TraesCS1D01G012500.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G014300.1	Wheat	cytosol	95.35	85.59
HORVU1Hr1G001710.1	Barley	mitochondrion	91.41	79.34
TraesCS2D01G571700.1	Wheat	cytosol, nucleus, plasma membrane	82.82	55.79
TraesCS5D01G273300.1	Wheat	cytosol	58.17	53.36
TraesCS1D01G268800.1	Wheat	plasma membrane, plastid	60.14	52.91
OQU82647	Sorghum	cytosol, nucleus, plasma membrane	75.92	52.48
Os04t0691800-01	Rice	plasma membrane	73.66	51.22
Zm00001d002939_P001	Maize	cytosol, nucleus, plasma membrane	75.92	51.04
TraesCS5D01G178600.1	Wheat	cytosol	54.37	50.06
TraesCS7D01G396900.1	Wheat	cytosol	56.48	49.26
GSMUA_Achr5P01190_001	Banana	cytosol	38.31	44.74
KRH23748	Soybean	nucleus	62.68	44.06
KRH44923	Soybean	nucleus	62.25	43.33
TraesCS2D01G333300.1	Wheat	cytosol	49.86	43.07
VIT_18s0072g01170.t01	Wine grape	cytosol	60.7	43.01
CDY04800	Canola	cytosol	60.28	42.5
Solyc11g022400.1.1	Tomato	nucleus	56.06	42.39
CDY21373	Canola	cytosol	60.28	42.21
Bra024523.1-P	Field mustard	cytosol	60.28	42.13
PGSC0003DMT400089685	Potato	cytosol	60.85	42.11
PGSC0003DMT400023971	Potato	cytosol	60.85	42.11
AT1G22610.1	Thale cress	cytosol	60.56	41.79
GSMUA_Achr3P22190_001	Banana	cytosol	50.28	41.71
TraesCS6D01G228900.1	Wheat	cytosol	43.38	39.64
GSMUA_Achr10P...	Banana	cytosol	44.08	39.57
TraesCS2D01G598200.1	Wheat	cytosol	54.79	38.29
TraesCS2D01G234800.1	Wheat	cytosol	53.24	36.49
Solyc11g022460.1.1	Tomato	nucleus	36.62	35.18
TraesCS6D01G371600.1	Wheat	cytosol	48.59	34.26
TraesCS3D01G399900.1	Wheat	cytosol, plasma membrane	37.89	29.86
TraesCS4D01G011200.1	Wheat	cytosol, nucleus, plasma membrane	41.55	28.37
TraesCS7D01G478500.1	Wheat	cytosol	43.1	28.2
TraesCS5D01G484400.1	Wheat	cytosol	37.89	25.92

Protein Annotations

EnsemblPlants:TraesCS1D01G012500.1	EnsemblPlantsGene:TraesCS1D01G012500	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	InterPro:PRibTrfase_C	PANTHER:PTHR10024	PANTHER:PTHR10024:SF280	PFAM:PF00168	PFAM:PF08372
PFscan:PS50004	SMART:SM00239	SUPFAM:SSF49562	TIGR:cd08378	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr1D:-:6539966..6542338

Molecular Weight (calculated)

79128.7 Da

IEP (calculated)

9.624

GRAVY (calculated)

-0.164

Length

710 amino acids

Sequence
(BLAST)

001: MAKPPAQAAP GSAYNLVETK PPLPAKLGPR GAALAATKMA STYDMVEPMK YLYVSVVKAR DLPTMDVTGA LDPYVEVKLG NFKGVTKHLV KNHNPVWHQT
101: FAFSFANLQS NQLEVIVKDK DTIRDDFVGR VVLDVSDIPE CIPPDSPLAP QWYNLSDAHG ERFHHGHSLG EIMLAVWIGT QADEAFPEAY HSGAHPLSTA
201: GLTNTRSKVY YSPKLIYLKV SVIAAKDLIG AENSKDPPVK PTVAKIQMGS QIRRTRPGQP PANPVWNDDF MLVACEPFED PLVVTVEEKV ATGDEPIGRV
301: IIPVASNVPR NDLAKSVPSK WFNLSRGMTV EQAAADVTTG TKHREHSKTF ASKIHLKMSL ETAYHVLDES THYTSDLQPA AKKLRKSAIG MLEVGILSAR
401: GLGGNKNPYC VAKYGAKWVR TRTLLGTAAH AWNEQYIWEV FDLGTVITIA VFNNKNLEGH GDTKDERIGK MVATRLGKAE PPLRREVVEY ILDADSHMFS
501: LRRSKANFNR IISLFSGALA AGKWFDNICK WKNPLTTSLV HVLFLILVCY PELILSTVFL YIFLIGVWNY RRRPRNPPHM DTVLSHAELA QPDELDEEFD
601: TFPTSRPGDV VRMRYDRLRS VAGRVQTVVG DLAMQGERAQ SLLSWRDPRA TAMFITLSFI IAIVLYVTPF RVVAVLAGLY MLRHPRLRSK QPSAPFNFYR
701: RLPAKGDMLL

Best Arabidopsis Sequence Match ( AT1G22610.1 )
(BLAST)

0001: MNKLVVEIVD ASDLMPKDGQ GSASPFVEVE FDEQRQRTQT RFKDLNPQWN EKLVFNVGDL KRLNNKTVDV TVYDDRRDNQ PGKFLGRVKI AGAVVPLSES
0101: ESGVQRYPLD KRGLFSNIKG DIALRIYAAP IDGGDFVSPP PDFAEKVMKE DKRFESQEFQ FQNQNQNQNH YEQFEDEINN METLKPTKKK EKESRTFHSI
0201: GAHAGGGGGA PPMSQAKQAY PPPPNQPEFR SDFMRAPGPP TGAVMQMQPP RQQNPEFQLI ETSPPLAARM RQSYYYRSSG DKTSSTYDLV EQMHYLYVSV
0301: VKARDLPVMD VSGSLDPYVE VKLGNYKGLT KHLEKNSNPI WKQIFAFSKE RLQSNLLEVT VKDKDLLTKD DFVGRVHIDL TEVPLRVPPD SPLAPQWYRL
0401: EDKKGMKTNR GEIMLAVWMG TQADESFPDA WHSDAHRVSH SNLSNTRSKV YFSPKLYYLR IHVMEAQDLV PSDKGRVPDA IVKIQAGNQM RATRTPQMRT
0501: MNPQWHEELM FVVSEPFEDM VIVSVDDRIG PGKDEILGRV FIPVRDVPVR QEVGKMPDPR WFNLQRHSMS MEEENEKRKE KFSSKILLRV CIEAGYHVLD
0601: ESTHFSSDLQ PSSKHLRKPS IGILELGILS ARNLMPMKGK DGRMTDPYCV AKYGNKWVRT RTLLDALAPK WNEQYTWEVH DPCTVITIGV FDNSHVNDGG
0701: DFKDQRIGKV RVRLSTLETD RVYTHFYPLL VLTPGGLKKN GELQLALRYT CTGFVNMMAQ YGRPLLPKMH YIQPIPVRHI DLLRHQAMQI VATRLSRSEP
0801: PLRREVVEYM LDVDYHMFSL RRSKANFSRI MSLLSSVTLV CKWFNDICTW RNPITTCLVH VLFLILVCYP ELILPTVFLY LFVIGMWNYR YRPRHPPHMD
0901: ARVSQADNAH PDELDEEFDT FPTSRPADIV RMRYDRLRSV GGRVQTVVGD LATQGERIQA LLSWRDPRAT ALFIVFALIW AVFIYVTPFQ VIAIIIGLFM
1001: LRHPRFRSRM PSVPANFFKR LPAKSDMLL

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKA3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.