Factsheet for Bra024523.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024522.1-P	Field mustard	cytosol	21.16	100.0
CDY21373	Canola	cytosol	99.51	99.7
AT1G22610.1	Thale cress	cytosol	92.72	91.55
KRH23748	Soybean	nucleus	73.62	74.06
VIT_18s0072g01170.t01	Wine grape	cytosol	72.64	73.65
KRH44923	Soybean	nucleus	73.72	73.43
PGSC0003DMT400023971	Potato	cytosol	69.49	68.81
PGSC0003DMT400089685	Potato	cytosol	69.49	68.81
Solyc11g022400.1.1	Tomato	nucleus	62.01	67.09
Bra003302.1-P	Field mustard	cytosol	50.59	66.41
Bra008867.1-P	Field mustard	cytosol	50.2	66.32
Bra014601.1-P	Field mustard	cytosol	50.59	66.07
Bra006172.1-P	Field mustard	cytosol	49.8	65.8
TraesCS1B01G279300.1	Wheat	mitochondrion	49.7	65.58
HORVU1Hr1G075050.2	Barley	mitochondrion	51.48	64.97
Os05t0429700-01	Rice	plastid	51.38	64.93
Zm00001d038340_P001	Maize	plasma membrane, plastid	51.67	64.89
EES19579	Sorghum	plastid	51.48	64.73
Zm00001d010202_P001	Maize	plasma membrane	51.38	64.52
TraesCS1D01G268800.1	Wheat	plasma membrane, plastid	51.08	64.31
TraesCS1A01G268700.1	Wheat	plasma membrane, plastid	50.98	64.19
GSMUA_Achr3P22190_001	Banana	cytosol	53.05	62.97
Solyc11g022460.1.1	Tomato	nucleus	45.67	62.79
GSMUA_Achr10P...	Banana	cytosol	48.43	62.2
TraesCS1A01G014300.1	Wheat	cytosol	47.15	60.56
TraesCS1D01G012500.1	Wheat	cytosol, peroxisome, plasma membrane	42.13	60.28
GSMUA_Achr5P01190_001	Banana	cytosol	36.02	60.2
OQU82647	Sorghum	cytosol, nucleus, plasma membrane	60.24	59.59
HORVU1Hr1G001710.1	Barley	mitochondrion	47.64	59.17
TraesCS2B01G621600.1	Wheat	cytosol	29.63	58.56
Zm00001d002939_P001	Maize	cytosol, nucleus, plasma membrane	60.83	58.52
Os04t0691800-01	Rice	plasma membrane	58.27	57.98
TraesCS2B01G622500.1	Wheat	cytosol, nucleus, plasma membrane	59.15	57.96
TraesCS2A01G557900.1	Wheat	cytosol, nucleus, plasma membrane	58.86	57.44
Bra005915.1-P	Field mustard	cytosol	44.69	57.25
HORVU2Hr1G126730.1	Barley	cytosol, nucleus, plasma membrane	58.56	57.05
TraesCS2D01G571700.1	Wheat	cytosol, nucleus, plasma membrane	58.96	56.83
TraesCS2A01G558400.1	Wheat	cytosol	39.67	55.43
Bra035212.1-P	Field mustard	cytosol	53.15	53.36
Bra008528.1-P	Field mustard	cytosol	50.59	51.66
Bra036444.1-P	Field mustard	plasma membrane	14.67	51.2
Bra027570.1-P	Field mustard	cytosol	38.19	51.05
Bra000963.1-P	Field mustard	cytosol	48.13	50.31
Bra032527.1-P	Field mustard	cytosol	48.33	49.85
Bra037512.1-P	Field mustard	cytosol	51.48	49.15
Bra007594.1-P	Field mustard	cytosol	47.24	48.29
Bra036443.1-P	Field mustard	cytosol	42.52	42.23
Bra003788.1-P	Field mustard	cytosol	42.62	41.32
Bra020640.1-P	Field mustard	cytosol	10.33	40.86
Bra002118.1-P	Field mustard	cytosol	40.35	39.05
Bra034266.1-P	Field mustard	cytosol	25.0	35.47
TraesCSU01G020600.1	Wheat	cytosol	22.64	33.19
Bra007628.1-P	Field mustard	cytosol	25.59	32.34
Bra014445.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	44.98	31.54

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	EnsemblPlantsGene:Bra024523	EnsemblPlants:Bra024523.1	EnsemblPlants:Bra024523.1-P	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009506
GO:GO:0009507	GO:GO:0009536	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892
UniProt:M4E6W8	PFAM:PF00168	PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR10024
PANTHER:PTHR10024:SF272	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI0002542AEA	SEG:seg

Description

AT1G22610 (E=0.0) | C2 domain-containing protein

Coordinates

chrA09:-:24636776..24639826

Molecular Weight (calculated)

117167.0 Da

IEP (calculated)

9.287

GRAVY (calculated)

-0.439

Length

1016 amino acids

Sequence
(BLAST)

0001: MSKLVVEIVD ASDLMPKDGQ GSASPFVEVE FDDQRQRTQT RFKDLNPQWN EKLVFNVGDF RRLTNKTIDV TVYDDRRDNQ PGKFLGRVKI SGAVVPLSES
0101: EADVQRYPLD KRGLFSHIKG DIALRIYAAP VDGSDFIPPP VEEFAVKETK EEKQFEPQEF HNHNQNPNQN SFEEVYVETM KPKKKEKETR TFHSIGAQQS
0201: FEAKPPSHLP PNQPEFRSDF MRAPGPPPGA VMQMPLPPRQ NPEFQLIETS PPLAARRRQS YYYRSSGDKT SSTYDLVEQM HYLYVSVVKA RDLPVMDVSG
0301: SLDPYVEVKL GNYKGLTKHL EKNQNPIWKQ IFAFSKERLQ SNLLEVTVKD KDLITKDDFV GRVLIDLTEV PLRVPPDSPL APQWYRLEDK KGMKTNRGEV
0401: MLAVWMGTQA DESFPDAWHS DAHRVSHSNL SNTRSKVYFS PKLYYLRIHV MEAQDLVPSD KGRVPDAIVK IQAGNQMRAT RTPQMRTMSP QWGEELMFVV
0501: SEPFEDMVIV SVDDRIGPGK DEILGRLFIP VRDVPVRQET GKMPDPRWFN LQRHSMSMEE ETEKKKEKFS SKILLRLCIE AGYHVLDEST HFSSDLQPSS
0601: KHLRKPSIGL LELGILSARN LMPMKAKDGR MTDPYCVAKY GNKWVRTRTL LNALAPKWNE QYTWEVHDPC TVITIGVFDN GQTNDGGDSK DQRIGKVRVR
0701: LSTLETDRVY THYYPLLVLT PGGLKKNGEL QLALRYTCIS FVNMMAQYGR PLLPKMHYVQ PIPVRHIDLL RHQAMQIVAT RLSRSEPPLR REVVEYMLDV
0801: DYHMFSLRRS KANFSRIMSL LSSVTLVCKW FNDICTWRNP ITTCLVHVLF LILVCYPELI LPTIFLYLFV IGMWNYRYRP RHPPHMDARV SQADNAHPDE
0901: LDEEFDTFPT SRPADIVRMR YDRLRSVGGR VQTVVGDLAT QGERIQALLS WRDPRATALF IVFSLIWAVF IYITPFQVIA ILLGLFMLRH PRFRSRMPSV
1001: PANFFKRLPA KSDMLL

Best Arabidopsis Sequence Match ( AT1G22610.1 )
(BLAST)

0001: MNKLVVEIVD ASDLMPKDGQ GSASPFVEVE FDEQRQRTQT RFKDLNPQWN EKLVFNVGDL KRLNNKTVDV TVYDDRRDNQ PGKFLGRVKI AGAVVPLSES
0101: ESGVQRYPLD KRGLFSNIKG DIALRIYAAP IDGGDFVSPP PDFAEKVMKE DKRFESQEFQ FQNQNQNQNH YEQFEDEINN METLKPTKKK EKESRTFHSI
0201: GAHAGGGGGA PPMSQAKQAY PPPPNQPEFR SDFMRAPGPP TGAVMQMQPP RQQNPEFQLI ETSPPLAARM RQSYYYRSSG DKTSSTYDLV EQMHYLYVSV
0301: VKARDLPVMD VSGSLDPYVE VKLGNYKGLT KHLEKNSNPI WKQIFAFSKE RLQSNLLEVT VKDKDLLTKD DFVGRVHIDL TEVPLRVPPD SPLAPQWYRL
0401: EDKKGMKTNR GEIMLAVWMG TQADESFPDA WHSDAHRVSH SNLSNTRSKV YFSPKLYYLR IHVMEAQDLV PSDKGRVPDA IVKIQAGNQM RATRTPQMRT
0501: MNPQWHEELM FVVSEPFEDM VIVSVDDRIG PGKDEILGRV FIPVRDVPVR QEVGKMPDPR WFNLQRHSMS MEEENEKRKE KFSSKILLRV CIEAGYHVLD
0601: ESTHFSSDLQ PSSKHLRKPS IGILELGILS ARNLMPMKGK DGRMTDPYCV AKYGNKWVRT RTLLDALAPK WNEQYTWEVH DPCTVITIGV FDNSHVNDGG
0701: DFKDQRIGKV RVRLSTLETD RVYTHFYPLL VLTPGGLKKN GELQLALRYT CTGFVNMMAQ YGRPLLPKMH YIQPIPVRHI DLLRHQAMQI VATRLSRSEP
0801: PLRREVVEYM LDVDYHMFSL RRSKANFSRI MSLLSSVTLV CKWFNDICTW RNPITTCLVH VLFLILVCYP ELILPTVFLY LFVIGMWNYR YRPRHPPHMD
0901: ARVSQADNAH PDELDEEFDT FPTSRPADIV RMRYDRLRSV GGRVQTVVGD LATQGERIQA LLSWRDPRAT ALFIVFALIW AVFIYVTPFQ VIAIIIGLFM
1001: LRHPRFRSRM PSVPANFFKR LPAKSDMLL

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SKA3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.