Factsheet for Bra000963.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74344	Canola	cytosol	98.46	98.36
Bra008528.1-P	Field mustard	cytosol	90.43	88.34
AT4G00700.1	Thale cress	cytosol	80.66	77.93
KRH65054	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	15.95	62.5
Bra014601.1-P	Field mustard	cytosol	47.63	59.51
GSMUA_AchrUn_...	Banana	cytosol	35.91	59.45
GSMUA_Achr1P00330_001	Banana	cytosol	27.47	58.94
Bra003302.1-P	Field mustard	cytosol	46.81	58.79
VIT_15s0046g03030.t01	Wine grape	cytosol	61.52	58.74
Bra006172.1-P	Field mustard	cytosol	45.58	57.61
Solyc01g094410.2.1	Tomato	nucleus	59.67	57.48
Bra008867.1-P	Field mustard	cytosol	45.47	57.48
PGSC0003DMT400000108	Potato	cytosol	59.47	57.28
Bra035212.1-P	Field mustard	cytosol	58.23	55.93
KRH65087	Soybean	endoplasmic reticulum, mitochondrion, nucleus	57.51	55.73
Bra005915.1-P	Field mustard	cytosol	45.37	55.61
KRH48167	Soybean	endoplasmic reticulum, nucleus	57.3	55.59
KRH40482	Soybean	cytosol	56.58	54.13
EER99386	Sorghum	cytosol	55.66	53.78
Zm00001d006371_P001	Maize	cytosol	55.76	53.56
Zm00001d021494_P001	Maize	cytosol	56.28	53.42
Os07t0483500-01	Rice	cytosol	55.45	53.31
KRH00708	Soybean	cytosol	55.66	53.2
TraesCS2D01G234800.1	Wheat	cytosol	54.32	50.97
TraesCS2B01G261000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	54.42	50.77
HORVU4Hr1G079830.2	Barley	plasma membrane	54.63	50.62
Bra036444.1-P	Field mustard	plasma membrane	15.12	50.52
TraesCS2A01G238900.1	Wheat	cytosol	54.32	49.72
Bra007594.1-P	Field mustard	cytosol	50.51	49.4
Bra027570.1-P	Field mustard	cytosol	38.27	48.95
Bra024523.1-P	Field mustard	cytosol	50.31	48.13
Bra032527.1-P	Field mustard	cytosol	47.12	46.5
Bra037512.1-P	Field mustard	cytosol	50.1	45.77
Bra003788.1-P	Field mustard	cytosol	42.49	39.41
Bra036443.1-P	Field mustard	cytosol	41.46	39.39
Bra002118.1-P	Field mustard	cytosol	40.12	37.14
Bra020640.1-P	Field mustard	cytosol	9.57	36.19
GSMUA_Achr3P03790_001	Banana	cytosol	4.84	35.88
Bra034266.1-P	Field mustard	cytosol	25.41	34.5
Bra014445.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	48.97	32.85
Bra007628.1-P	Field mustard	cytosol	26.75	32.34
Bra024522.1-P	Field mustard	cytosol	5.86	26.51

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	EnsemblPlantsGene:Bra000963	EnsemblPlants:Bra000963.1	EnsemblPlants:Bra000963.1-P	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892
UniProt:M4C9T4	PFAM:PF00168	PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR10024
PANTHER:PTHR10024:SF219	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI000254076F	SEG:seg

Description

AT3G61300 (E=7e-267) | C2 domain-containing protein

Coordinates

chrA03:-:14148214..14151363

Molecular Weight (calculated)

110439.0 Da

IEP (calculated)

9.645

GRAVY (calculated)

-0.259

Length

972 amino acids

Sequence
(BLAST)

001: MSNIKLGVEV ISAHGLFNAD KQNSCSPFVE LKFDNQIFHT TTKPNDPNPV WHESFYFAVS DPSFLSTLTL EAHVYSYQDG TDAKPFLGKV RVNGTSFVPH
101: SEAAPFNYPL EKRSVFSRAR GELGLRVFIT EDPSITPFLP TPVPESPRSY IPSPRQEPVK SIITAAANMV AADKPKARTL YNVTPSVNQQ PQQPVMNYGM
201: QEMRAAAPMP PRVVQYNGPG PSSDFTVKET SPFLGGGRII GGRIVRGTQR PVGTYDLVEE MRFLFVRVVK ARDLPDRDLT GSLDPYVEVK IGNFKGVTRH
301: LDKNSDPEWN QVFAFAKENL QSNVLEIVVK DKDLVLDDYV GTVRFDLHEV RSRVPPDSPL APEWYRLENK RGEKKRAEIM LAVWEGTQAD EAFGDAVFSD
401: SLTSSDSSDI ISANLRSKVY HSPRLWYLRV KIIEAQDVII VSDKSRLPEA FVRIQVGNQM LKTKVAQRSF HPRWDNEFMF VVAEPFEEHL VLSVEDHSAA
501: NRDEPVGKAV IPLSAIERRN DDRAFRSRWF HLEDSISDAM DEDKAKRVNS DLRPAARQLW KQAIGVLEVG ILNANGLHPV ENRDGKGTSD TYVVAKYGQK
601: WVRSRTVIKS LNPKYNEQYT WEVLDPATVL TICVFDNGHF SSGNGRDQTI GKVRIRLSTL QTGRVYTNAY PLLVLTPSGL KKRGELHLAV RFTCTSVSNT
701: LMKYTKPLLP KMHYTQPLSV NLQEMLRVQA LNIIVARLGR SEPPLRREVV EYMTDAKTHL FSMRRSKANF FRFTAVFSGV MSVWKWMGEV CSWRTPVTTG
801: LVHVLYTMLV MFPEMILPTV FLYMAVIGLW NYRIRPRFPP HMDTKLSYAE SVNADELDEE FDIFPTMKAP DIVKMRYDRL RIVAGKIQTV VGDIAAQGER
901: VQALLSWRDP RATAIFVTFC FIVAMVLYIT PFKLFALLSG YYFMRHPKLR HRIPSAPLNF FRRLPAMSDS ML

Best Arabidopsis Sequence Match ( AT4G00700.2 )
(BLAST)

0001: MSNIKLGVEV ISAQGLLQRD KHNSCSPFVE LKFDNQIFRA TTKHNDPNPV WHECFYFVVS DPSVLSTRTL EAHVYSYQNE FDAKPFLGKV RVNGTSFVPR
0101: SEAAPFNYPL EKRSVFSRAR GELCLRVFIT DDPSVTPSVP TPVPESPQAY SPSPRKEHVK SLITADASMA TDERRELKPK TRTFHNSAPL VKQQPMMNYG
0201: IHEMRAAPMP PRVVQVNGPG PSLHQLPPDF SVKETSPLLG GGRIVGGRVV RGTERPTSGT YDLVEEMKFL YVRVVKARDL PNKDLTGSLD PYVVVKIGNF
0301: KGVTTHFNKN TDPEWNQVFA FAKDNLQSNF LEVMVKDKDI LLDDFVGIVK FDLREVQSRV PPDSPLAPQW YRLENKRGEK KNYEIMLAVW SGTQADEAFG
0401: DATFSDSLVD SDSSNIISAN LRSKVYHSPR LWYLRVQILE AQDVIIVSDK SRVPEVFVRV KVGNQMLRTK FPQRSNNPKW GDEFTFVVAE PFEDNLVLSV
0501: EDHTAPNRDE PVGKAVILMN DIEKRIDDKP FHDRWVHLED SISDAMDVDK AKKVKFATRL RYKAVLDGGY HVFDESMYNS SDLRPSSRKL WKPAIGVLEL
0601: GILNANVFHS MKTREGKGTS DTYVVAKYGH KWVRSRTVIN SMNPKYNEQY TWEVFDPATV LTICVFDNAH FAAGDGGNKR DQPIGKVRIR LSTLQTGRVY
0701: THAYPLLVLQ PTGLKKRGEL HLAVRFTCTS VSSMLMKYTK PLLPKMHYIL PLSTNQQEAL KMQAINIIIV RLGRSEPPLR REVVDYLTDW KSQLFSMRRS
0801: KANFNRFTTV FSGALSVWKW MEQVCTWKTP VTTALVHVLY TMLVTFPEMI LPTVFLYMAV IGMWNYRFKP RFPPHMDAKL SYADNVNSDE LDEEFDTFPT
0901: VRAPDIVKMR YDRLRSVAGK VQSVAGDIAA QGERVQALLS WRDPRATAIF VTFCFIIAMA LYITPFKLVA LLSGYYFMRH PKLRHRIPSA PVNFFRRLPA
1001: MTDSML

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXU9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.