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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d006371_P001 Maize cytosol 94.93 94.37
Zm00001d021494_P001 Maize cytosol 93.44 91.8
Os07t0483500-01 Rice cytosol 89.66 89.22
TraesCS2D01G234800.1 Wheat cytosol 88.67 86.1
TraesCS2B01G261000.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 88.57 85.51
HORVU4Hr1G079830.2 Barley plasma membrane 87.97 84.37
TraesCS2A01G238900.1 Wheat cytosol 88.57 83.9
GSMUA_AchrUn_... Banana cytosol 39.96 68.48
KRH65054 Soybean endoplasmic reticulum, peroxisome, plasma membrane 16.3 66.13
EER90047 Sorghum cytosol 50.1 65.03
GSMUA_Achr1P00330_001 Banana cytosol 28.83 64.02
Solyc01g094410.2.1 Tomato nucleus 62.92 62.74
VIT_15s0046g03030.t01 Wine grape cytosol 63.22 62.48
PGSC0003DMT400000108 Potato cytosol 62.62 62.44
KXG27468 Sorghum cytosol 62.23 61.86
CDY42494 Canola cytosol, plasma membrane 24.35 58.33
EER90045 Sorghum cytosol 46.92 58.06
KRH48167 Soybean endoplasmic reticulum, nucleus 57.16 57.39
KRH65087 Soybean endoplasmic reticulum, mitochondrion, nucleus 57.06 57.23
Bra008528.1-P Field mustard cytosol 56.56 57.19
CDY54062 Canola cytosol 56.36 56.98
CDY01973 Canola cytosol 56.06 56.91
KRH40482 Soybean cytosol 56.56 56.0
CDX74344 Canola cytosol 54.08 55.91
CDX71747 Canola cytosol 42.15 55.86
Bra000963.1-P Field mustard cytosol 53.78 55.66
KRH00708 Soybean cytosol 55.86 55.26
CDX91899 Canola cytosol 53.68 55.21
EES05763 Sorghum cytosol 42.05 54.51
EES19579 Sorghum plastid 43.24 53.84
AT3G61300.1 Thale cress cytosol 51.79 53.6
AT4G00700.1 Thale cress cytosol 53.48 53.48
CDX89108 Canola cytosol 47.81 52.34
CDY48929 Canola cytosol 50.1 51.12
Bra007594.1-P Field mustard cytosol 50.1 50.7
KXG26530 Sorghum cytosol 43.74 50.69
OQU82647 Sorghum cytosol, nucleus, plasma membrane 48.71 47.71
EES07745 Sorghum cytosol 47.71 47.34
CDX71748 Canola cytosol 7.95 44.2
GSMUA_Achr3P03790_001 Banana cytosol 5.57 42.75
EES03181 Sorghum cytosol 42.45 39.5
OQU91253 Sorghum cytosol, nucleus, plasma membrane 40.36 39.19
KXG27914 Sorghum cytosol 35.98 36.24
OQU88487 Sorghum cytosol 36.98 34.48
Bra014445.1-P Field mustard cytosol, mitochondrion, plasma membrane, plastid 47.61 33.06
Protein Annotations
Gene3D:2.60.40.150MapMan:35.1EntrezGene:8077438InterPro:C2_domInterPro:C2_domain_sfUniProt:C5X8K8
EnsemblPlants:EER99386ProteinID:EER99386ProteinID:EER99386.1GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR000008InterPro:IPR035892PFAM:PF00168PFAM:PF08372InterPro:PRibTrfase_CPFscan:PS50004
PANTHER:PTHR10024PANTHER:PTHR10024:SF259SMART:SM00239EnsemblPlantsGene:SORBI_3002G303300SUPFAM:SSF49562unigene:Sbi.15869
TMHMM:TMhelixUniParc:UPI0001A83F7FRefSeq:XP_002462865.1SEG:seg::
Description
hypothetical protein
Coordinates
chr2:-:67925196..67930951
Molecular Weight (calculated)
115225.0 Da
IEP (calculated)
9.112
GRAVY (calculated)
-0.324
Length
1006 amino acids
Sequence
(BLAST)
0001: MMSNLKLGVE VTSAHDLLPK EQGTANTFVE VEFDGQKFRT AIKDRDINPV WNEQFYFNIS DPSRLPELHL EAYVYHADRA SNSKACLGKV RISGTSFVSQ
0101: PDATPLHYPL EKRTILSRAR GELGLRVFLT DDPSVRVSAP GHQEFDMLST PTTAQEQAAA NSIPNPFQET RANPVRQFQH LPKEQQRPAQ PYYAEGSYGD
0201: QQQRSFSAVG NKAAAPQPQV QVSRMYAPGP QQPIDFQLKE TSPTLGGGRV IGGRVYPGEK AGAYDLVEKM QYLFVRVVKA RDLPNMDITG SLDPFVEVHL
0301: GNYKMKTKYF EKNQRPEWDE VFAFPKEVMQ STMLEVVVKD KDVVRDDYVG RVSIDLNEVP LRVPPDSPLA PEWYRLMGKD GMRDRGELML AVWYGTQADE
0401: CFPSAIHAGS TPVESHLHNY IRGKVYPAPR MWYVRVNVIE AHDIYPMENH IPDVLVKVRL GHQLLKTRQV RSPTRNFMWN EELMFVAAEP FEDDLIISVE
0501: DRVAQNKDEV IGETIIPLAR LPRRADHKPV RPAWFDLRRP GIIDVNQLKE DKFYAKVNLR VCLEGGYHVL DESTQYCSDL RPTMKQLWKP PIGMLEVGIL
0601: SANGLNPTKT RNDRGSCDAY CVAKYGSKWV RTRTIVDNLS PRFNEQYTWE VFDHGTVLTI GLFDNCHISG DNNHGSSGHM DKPIGKVRIR LSTLETSRVY
0701: THSYPLLVLS PSGVKKMGEL HLAIRFTTSS LINVLFTYSR PLLPKMHYAQ PLSIVQQEIL RHQAVQLVAQ RLGRMEPPVR REVVEFMSDA RSHLWSMRRS
0801: KANFFRLMQV FSGVIAAGKW FGDVCQWKNP VTTVLVHVLF IMLVFYPDLI LPTVFLYMFL IGLWNYRFRP RFPPHMNTRI SYADVAHPDE LDEEFDTFPT
0901: SRSPDLIRMR YDRLRHVAGR IQTVVGDIAT QGERLQSLLS WRDPRATAMF LIFCLITAII LYVTPFQVIA LCLGFFWMRH PRFRHKVPSA PANFFRRLPA
1001: KTDSLL
Best Arabidopsis Sequence Match ( AT4G11610.2 )
(BLAST)
0001: MMMSNLKLGV DVIGAHNLFP KDGQGTSNAY VELYFDGQKH RTTIKDRDLN PVWNESFFFN ISDPSRLHYL NLEAQAYSHN RSTNGRSFLG KVSLSGTSFV
0101: PHSDAVVLHF PMERRGIFSR VRGELGLKVY ITDEASLKSS AASNDHPDNL DPALPREHRS DKRHVFYNLP NSAQEHQHQH PQGPNQSSSL AAEQDNHNEH
0201: HHHYVPKHQV DEMRSEPARP SKLVHAHSIA SAQPADFALK ETSPHLGGGR VVGGRVIHKD KTATSTYDLV ERMYFLYVRV VKARELPIMD ITGSVDPFVE
0301: VRVGNYKGIT RHFEKRQHPE WNQVFAFAKE RMQASVLEVV VKDKDLLKDD YVGFVRFDIN DVPLRVPPDS PLAPQWYRLE DKKGEKIKGE LMLAVWIGTQ
0401: ADEAFSDAWH SDAAMPVDCS PAISAVLRSK VYHAPRLWYV RVNVIEAQDL IPTDKTRFPD VYVKAQLGNQ VMKTRPCQAR TLGAVWNEDF LFVVAEPFED
0501: HLVLTVEDRV APGKDEIVGR TYIPLNTVEK RADDHMIHAR WYNLERPVIV DVDQLKREKF SMRIHLRVCL EGGYHVLDES THYSSDLRPS ARPLWRQPIG
0601: VLELGILNAV GLHPMKTREG RGTSDTFCVG KYGQKWVRTR TMVDNLCPKY NEQYTWEVFD PATVLTVGVF DNGQLGEKGN RDVKIGKIRI RLSTLETGRI
0701: YTHSYPLLVL HPTGVKKMGE LHMAVRFTCI SFANMLYQYS KPLLPKMHYV RPFSVMQQDM LRHQAVNIVA ARLGRAEPPL RKEIIEFMSD TDSHLWSMRK
0801: SKANFFRMMT VFSGVIAVGK WFSDICSWRN PITTVLVHVL FLMLVCLPEL ILPTMFLYMF LIGLWNYRFR PRYPPHMNTK ISQAEAVHPD ELDEEFDTFP
0901: TTRNPDMVRL RYDRLRSVAG RIQTVIGDLA TQGERFQALL SWRDPRATAI FVILCFIAAI VFFITPIQIV VALAGFFTMR HPRFRHRLPS VPVNFFRRLP
1001: ARTDSML
Arabidopsis Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q84TJ7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.