Factsheet for AT4G00700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01973	Canola	cytosol	81.31	82.54
Bra008528.1-P	Field mustard	cytosol	81.51	82.41
CDY54062	Canola	cytosol	81.31	82.21
CDX74344	Canola	cytosol	78.43	81.09
CDX91899	Canola	cytosol	78.73	80.98
Bra000963.1-P	Field mustard	cytosol	77.93	80.66
KRH65054	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	15.41	62.5
AT3G57880.3	Thale cress	cytosol	46.42	60.41
GSMUA_AchrUn_...	Banana	cytosol	35.09	60.14
AT1G51570.1	Thale cress	cytosol	46.02	59.66
GSMUA_Achr1P00330_001	Banana	cytosol	26.64	59.16
VIT_15s0046g03030.t01	Wine grape	cytosol	59.34	58.64
Solyc01g094410.2.1	Tomato	nucleus	57.55	57.38
AT5G12970.1	Thale cress	cytosol	43.84	57.35
PGSC0003DMT400000108	Potato	cytosol	57.36	57.19
KRH40482	Soybean	cytosol	57.26	56.69
AT4G11610.1	Thale cress	cytosol	56.36	56.08
KRH65087	Soybean	endoplasmic reticulum, mitochondrion, nucleus	55.27	55.43
KRH00708	Soybean	cytosol	55.96	55.36
KRH48167	Soybean	endoplasmic reticulum, nucleus	55.07	55.29
AT5G06850.1	Thale cress	cytosol	43.44	55.04
Zm00001d006371_P001	Maize	cytosol	53.98	53.66
EER99386	Sorghum	cytosol	53.48	53.48
Zm00001d021494_P001	Maize	cytosol	54.37	53.42
Os07t0483500-01	Rice	cytosol	53.18	52.92
AT3G61300.1	Thale cress	cytosol	50.7	52.47
TraesCS2D01G234800.1	Wheat	cytosol	52.39	50.87
TraesCS2B01G261000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	52.58	50.77
HORVU4Hr1G079830.2	Barley	plasma membrane	52.68	50.52
TraesCS2A01G238900.1	Wheat	cytosol	52.49	49.72
AT4G20080.1	Thale cress	cytosol	38.07	49.48
AT1G22610.1	Thale cress	cytosol	50.2	49.08
AT5G48060.1	Thale cress	cytosol	47.81	46.43
AT1G04150.1	Thale cress	cytosol	44.93	44.66
AT5G44760.1	Thale cress	cytosol	20.68	43.51
GSMUA_Achr3P03790_001	Banana	cytosol	5.27	40.46
AT3G03680.1	Thale cress	cytosol	40.26	39.82
AT5G17980.1	Thale cress	cytosol	40.66	38.99
AT1G74720.1	Thale cress	cytosol	41.35	38.48
AT5G03435.1	Thale cress	cytosol	26.24	35.44
AT3G61720.1	Thale cress	cytosol	27.44	34.72

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	EntrezGene:828031	ProteinID:AEE81923.1	ProteinID:ANM66307.1	ArrayExpress:AT4G00700
EnsemblPlantsGene:AT4G00700	RefSeq:AT4G00700	TAIR:AT4G00700	RefSeq:AT4G00700-TAIR-G	EnsemblPlants:AT4G00700.1	TAIR:AT4G00700.1
EMBL:AY080664	Unigene:At.3773	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
InterPro:IPR000008	InterPro:IPR035892	RefSeq:NP_001328213.1	RefSeq:NP_191979.2	PFAM:PF00168	PFAM:PF08372
PO:PO:0000013	PO:PO:0000084	PO:PO:0000230	PO:PO:0001054	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009047
PO:PO:0020030	PO:PO:0020100	PO:PO:0025022	PO:PO:0025281	InterPro:PRibTrfase_C	PFscan:PS50004
PANTHER:PTHR10024	PANTHER:PTHR10024:SF219	UniProt:Q8RXU9	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix
UniParc:UPI00000A4013	SEG:seg	:	:	:	:

Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXU9]

Coordinates

chr4:+:285876..289575

Molecular Weight (calculated)

114685.0 Da

IEP (calculated)

9.781

GRAVY (calculated)

-0.313

Length

1006 amino acids

Sequence
(BLAST)

0001: MSNIKLGVEV ISAQGLLQRD KHNSCSPFVE LKFDNQIFRA TTKHNDPNPV WHECFYFVVS DPSVLSTRTL EAHVYSYQNE FDAKPFLGKV RVNGTSFVPR
0101: SEAAPFNYPL EKRSVFSRAR GELCLRVFIT DDPSVTPSVP TPVPESPQAY SPSPRKEHVK SLITADASMA TDERRELKPK TRTFHNSAPL VKQQPMMNYG
0201: IHEMRAAPMP PRVVQVNGPG PSLHQLPPDF SVKETSPLLG GGRIVGGRVV RGTERPTSGT YDLVEEMKFL YVRVVKARDL PNKDLTGSLD PYVVVKIGNF
0301: KGVTTHFNKN TDPEWNQVFA FAKDNLQSNF LEVMVKDKDI LLDDFVGIVK FDLREVQSRV PPDSPLAPQW YRLENKRGEK KNYEIMLAVW SGTQADEAFG
0401: DATFSDSLVD SDSSNIISAN LRSKVYHSPR LWYLRVQILE AQDVIIVSDK SRVPEVFVRV KVGNQMLRTK FPQRSNNPKW GDEFTFVVAE PFEDNLVLSV
0501: EDHTAPNRDE PVGKAVILMN DIEKRIDDKP FHDRWVHLED SISDAMDVDK AKKVKFATRL RYKAVLDGGY HVFDESMYNS SDLRPSSRKL WKPAIGVLEL
0601: GILNANVFHS MKTREGKGTS DTYVVAKYGH KWVRSRTVIN SMNPKYNEQY TWEVFDPATV LTICVFDNAH FAAGDGGNKR DQPIGKVRIR LSTLQTGRVY
0701: THAYPLLVLQ PTGLKKRGEL HLAVRFTCTS VSSMLMKYTK PLLPKMHYIL PLSTNQQEAL KMQAINIIIV RLGRSEPPLR REVVDYLTDW KSQLFSMRRS
0801: KANFNRFTTV FSGALSVWKW MEQVCTWKTP VTTALVHVLY TMLVTFPEMI LPTVFLYMAV IGMWNYRFKP RFPPHMDAKL SYADNVNSDE LDEEFDTFPT
0901: VRAPDIVKMR YDRLRSVAGK VQSVAGDIAA QGERVQALLS WRDPRATAIF VTFCFIIAMA LYITPFKLVA LLSGYYFMRH PKLRHRIPSA PVNFFRRLPA
1001: MTDSML

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.