Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006172.1-P | Field mustard | cytosol | 95.45 | 95.45 |
| CDX78498 | Canola | cytosol | 95.19 | 95.19 |
| Bra008867.1-P | Field mustard | cytosol | 94.93 | 94.93 |
| CDX97214 | Canola | cytosol | 94.8 | 94.8 |
| CDY68091 | Canola | cytosol | 94.8 | 94.8 |
| CDX70485 | Canola | cytosol | 94.41 | 94.41 |
| KRH29670 | Soybean | cytosol | 84.66 | 83.78 |
| KRH23178 | Soybean | cytosol | 82.57 | 81.94 |
| KRH10160 | Soybean | cytosol | 82.31 | 81.78 |
| AT3G57880.3 | Thale cress | cytosol | 82.05 | 81.63 |
| AT1G51570.1 | Thale cress | cytosol | 80.49 | 79.77 |
| EER90047 | Sorghum | cytosol | 79.32 | 78.71 |
| TraesCS5A01G265400.1 | Wheat | cytosol | 78.67 | 78.17 |
| TraesCS5B01G265100.1 | Wheat | cytosol | 78.67 | 78.17 |
| HORVU5Hr1G073350.1 | Barley | cytosol | 78.54 | 78.04 |
| TraesCS5D01G273300.1 | Wheat | cytosol | 78.54 | 78.04 |
| Os05t0370600-01 | Rice | plastid | 78.41 | 77.91 |
| Zm00001d036801_P001 | Maize | plasma membrane | 78.02 | 77.52 |
| Zm00001d046749_P001 | Maize | mitochondrion | 77.37 | 76.77 |
| VIT_06s0004g01550.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 73.08 | 73.37 |
| TraesCS5B01G171600.1 | Wheat | cytosol | 72.95 | 72.76 |
| HORVU5Hr1G053320.2 | Barley | cytosol | 72.82 | 72.63 |
| TraesCS5D01G178600.1 | Wheat | cytosol | 72.56 | 72.37 |
| PGSC0003DMT400055029 | Potato | cytosol | 70.61 | 70.7 |
| Solyc01g006620.2.1 | Tomato | cytosol | 70.09 | 70.18 |
| TraesCS5A01G174100.1 | Wheat | cytosol | 66.71 | 67.23 |
| AT5G06850.1 | Thale cress | cytosol | 67.1 | 64.99 |
| AT4G20080.1 | Thale cress | cytosol | 57.09 | 56.72 |
| AT4G11610.1 | Thale cress | cytosol | 68.53 | 52.13 |
| AT5G44760.1 | Thale cress | cytosol | 32.38 | 52.09 |
| AT5G48060.1 | Thale cress | cytosol | 67.23 | 49.9 |
| AT1G22610.1 | Thale cress | cytosol | 65.93 | 49.27 |
| AT3G61300.1 | Thale cress | cytosol | 57.35 | 45.37 |
| AT1G04150.1 | Thale cress | cytosol | 59.69 | 45.36 |
| AT4G00700.1 | Thale cress | cytosol | 57.35 | 43.84 |
| AT3G03680.1 | Thale cress | cytosol | 51.24 | 38.74 |
| AT5G03435.1 | Thale cress | cytosol | 37.32 | 38.52 |
| AT3G61720.1 | Thale cress | cytosol | 39.4 | 38.11 |
| AT1G74720.1 | Thale cress | cytosol | 51.89 | 36.91 |
| AT5G17980.1 | Thale cress | cytosol | 49.41 | 36.23 |
Protein Annotations
| Gene3D:2.60.40.150 | MapMan:35.1 | EntrezGene:831137 | ProteinID:AED91836.1 | ArrayExpress:AT5G12970 | EnsemblPlantsGene:AT5G12970 |
| RefSeq:AT5G12970 | TAIR:AT5G12970 | RefSeq:AT5G12970-TAIR-G | EnsemblPlants:AT5G12970.1 | TAIR:AT5G12970.1 | Unigene:At.49791 |
| InterPro:C2_dom | InterPro:C2_domain_sf | ProteinID:CAB88261.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0009506 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:IPR000008 |
| InterPro:IPR035892 | RefSeq:NP_196801.1 | PFAM:PF00168 | PFAM:PF08372 | PO:PO:0000037 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | InterPro:PRibTrfase_C | PFscan:PS50004 | PANTHER:PTHR10024 | PANTHER:PTHR10024:SF243 |
| UniProt:Q9LXU2 | SMART:SM00239 | SUPFAM:SSF49562 | TMHMM:TMhelix | UniParc:UPI0000048B19 | SEG:seg |
Description
Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LXU2]
Coordinates
chr5:+:4102115..4105414
Molecular Weight (calculated)
88514.9 Da
IEP (calculated)
9.556
GRAVY (calculated)
-0.181
Length
769 amino acids
Sequence
(BLAST)
(BLAST)
001: MQKPGQNIDF ALKETSPKIG AGSVTGDKLC STYDLVEQMH YLYVRVVKAK ELPGKDVTGS CDPYVEVKLG NYRGMTKHFE KRSNPEWKQV FAFSKERIQA
101: SILEVVVKDK DVVLDDLIGR IMFDLNEIPK RVPPDSPLAP QWYRLEDRHG RKVKGELMLA VWMGTQADEA FSDAWHSDAA TVGPEGVTHI RSKVYLSPKL
201: WYVRVNVIEA QDLIPHDKTK FPEVYVKAML GNQTLRTRIS QTKTLNPMWN EDLMFVVAEP FEEALILAVE DRVAPNKDET LGRCAIPLQN VQRRLDHRPL
301: NSRWFNLEKH IMVEGEQKEI KFASRIHLRI FLEGGYHVLD ESTHYSSDLR PTAKQLWKPS IGLLEVGIIS AHGLMPMKSK DGKGTTDAYC VAKYGQKWIR
401: TRTIVDSFTP KWNEQYTWEV FDTCTVITFG AFDNGHIPGG SGKDLRIGKV RIRLSTLEAD RIYTHSYPLL VFHPSGIKKT GEIQLAVRFT CLSLINMLHM
501: YSQPLLPKMH YIHPLSVLQL DSLRHQAMNI VSARLNRAEP PLRKEIVEYM LDVDSHMWSM RRSKANFFRI MNVLSGLIAV GKWFDQICNW RNPITTILIH
601: VLFIILVLYP ELILPTVFLY LFLIGIWNFR WRPRHPPHMD TRLSHADAVH PDELDEEFDT FPTSRSSEIV RMRYDRLRSI GGRVQTVIGD LATQGERFLS
701: LLSWRDPRAT TLFVLFCLIA AIVLYVTPFQ VVALLAGIYV LRHPRFRHKL PSVPLNLFRR LPARSDSLL
101: SILEVVVKDK DVVLDDLIGR IMFDLNEIPK RVPPDSPLAP QWYRLEDRHG RKVKGELMLA VWMGTQADEA FSDAWHSDAA TVGPEGVTHI RSKVYLSPKL
201: WYVRVNVIEA QDLIPHDKTK FPEVYVKAML GNQTLRTRIS QTKTLNPMWN EDLMFVVAEP FEEALILAVE DRVAPNKDET LGRCAIPLQN VQRRLDHRPL
301: NSRWFNLEKH IMVEGEQKEI KFASRIHLRI FLEGGYHVLD ESTHYSSDLR PTAKQLWKPS IGLLEVGIIS AHGLMPMKSK DGKGTTDAYC VAKYGQKWIR
401: TRTIVDSFTP KWNEQYTWEV FDTCTVITFG AFDNGHIPGG SGKDLRIGKV RIRLSTLEAD RIYTHSYPLL VFHPSGIKKT GEIQLAVRFT CLSLINMLHM
501: YSQPLLPKMH YIHPLSVLQL DSLRHQAMNI VSARLNRAEP PLRKEIVEYM LDVDSHMWSM RRSKANFFRI MNVLSGLIAV GKWFDQICNW RNPITTILIH
601: VLFIILVLYP ELILPTVFLY LFLIGIWNFR WRPRHPPHMD TRLSHADAVH PDELDEEFDT FPTSRSSEIV RMRYDRLRSI GGRVQTVIGD LATQGERFLS
701: LLSWRDPRAT TLFVLFCLIA AIVLYVTPFQ VVALLAGIYV LRHPRFRHKL PSVPLNLFRR LPARSDSLL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.