Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra036444.1-P Field mustard plasma membrane 27.24 95.19
CDY21171 Canola cytosol 91.45 91.45
CDY29951 Canola cytosol 91.74 91.38
Bra036443.1-P Field mustard cytosol 91.84 91.3
KRH57988 Soybean cytosol 72.47 75.82
KRH04520 Soybean cytosol 73.16 75.38
VIT_08s0056g01530.t01 Wine grape cytosol 72.57 74.1
PGSC0003DMT400054936 Potato cytosol 70.11 70.8
Solyc01g007170.2.1 Tomato cytosol 65.59 70.21
GSMUA_Achr10P... Banana cytosol 32.35 64.76
TraesCS4D01G011200.1 Wheat cytosol, nucleus, plasma membrane 61.75 60.38
Zm00001d013654_P001 Maize plasma membrane 62.05 60.33
TraesCS4A01G300400.1 Wheat cytosol 61.46 60.1
TraesCS4B01G013400.1 Wheat cytosol 61.46 59.58
OQU91253 Sorghum cytosol, nucleus, plasma membrane 60.08 58.98
HORVU4Hr1G002160.1 Barley plastid 61.75 56.27
AT5G12970.1 Thale cress cytosol 38.74 51.24
AT3G57880.3 Thale cress cytosol 38.84 51.1
AT1G51570.1 Thale cress cytosol 38.25 50.13
AT5G06850.1 Thale cress cytosol 36.77 47.1
AT1G74720.1 Thale cress cytosol 47.59 44.77
AT4G20080.1 Thale cress cytosol 34.02 44.7
AT4G11610.1 Thale cress cytosol 43.17 43.42
AT1G04150.1 Thale cress cytosol 42.08 42.29
AT1G22610.1 Thale cress cytosol 42.48 41.98
AT5G48060.1 Thale cress cytosol 42.58 41.8
AT5G17980.1 Thale cress cytosol 43.07 41.75
AT3G61300.1 Thale cress cytosol 39.23 41.05
AT4G00700.1 Thale cress cytosol 39.82 40.26
AT5G44760.1 Thale cress cytosol 18.49 39.33
AT3G61720.1 Thale cress cytosol 24.88 31.82
AT5G03435.1 Thale cress cytosol 23.3 31.81
Protein Annotations
Gene3D:2.60.40.150MapMan:35.1EntrezGene:821190ProteinID:AAF03465.1ProteinID:AEE73971.1ArrayExpress:AT3G03680
EnsemblPlantsGene:AT3G03680RefSeq:AT3G03680TAIR:AT3G03680RefSeq:AT3G03680-TAIR-GEnsemblPlants:AT3G03680.1TAIR:AT3G03680.1
Unigene:At.74089InterPro:C2_domInterPro:C2_domain_sfncoils:CoilGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757
InterPro:IPR000008InterPro:IPR035892RefSeq:NP_187018.1PFAM:PF00168PFAM:PF08372PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022InterPro:PRibTrfase_CPFscan:PS50004
PANTHER:PTHR10024PANTHER:PTHR10024:SF172UniProt:Q9SS68SMART:SM00239SUPFAM:SSF49562TMHMM:TMhelix
UniParc:UPI000004869ESEG:seg::::
Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SS68]
Coordinates
chr3:+:907384..910928
Molecular Weight (calculated)
114272.0 Da
IEP (calculated)
9.032
GRAVY (calculated)
-0.424
Length
1017 amino acids
Sequence
(BLAST)
0001: MADNVLRKLI VEICSARNLM PKDGQGTASA YAIVDFDGQR RRTKTKFRDL NPQWDEKLEF FVHDVATMGE EILEINLCND KKTGKRSTFL GKVKIAGSAF
0101: ASAGSETLVY YPLEKRSVFS QIKGEIGLKA YYVDENPPAA PAATEPKPEA AAATEEKPPE IAKAEDGKKE TEAAKTEEKK EGDKKEEEKP KEEAKPDEKK
0201: PDAPPDTKAK KPDTAVAPPP PPAEVKNPPI PQKAETVKQN ELGIKPENVN RQDLIGSDLE LPSLTRDQNR GGGYDLVDRM PFLYIRVAKA KRAKNDGSNP
0301: VYAKLVIGTN GVKTRSQTGK DWDQVFAFEK ESLNSTSLEV SVWSEEKIEK EDKTTTTTES CLGTVSFDLQ EVPKRVPPDS PLAPQWYTLE SEKSPGNDVM
0401: LAVWLGTQAD EAFQEAWQSD SGGLIPETRS KVYLSPKLWY LRLTVIQTQD LQLGLGSEAK SKIPTTELYV KAQLGPQVFK TARTSIGPSA SSSGSGNPTW
0501: NEDLVFVASE PFEPFLIVTV EDITNGQSIG QTKIHMGSVE RRNDDRTEPK SRWFNLAGDE KKPYSGRIHV KVCLEGGYHV LDEAAHVTSD VRPSAKQLAK
0601: PPIGLLEVGI RGATNLLPVK TRDGTRGTTD AYVVAKYGPK WIRTRTILDR FNPRWNEQYT WDVYDPCTVL TIGVFDNGRY KRDESGKQGR DVRVGKIRVR
0701: LSTLDMNRIY LNSYTLTVIL PSGAKKMGEV EIAVRFSCPS WLSIIQAYVT PMLPRMHYVR PLGPAQQDIL RHTAMRIVTA RLARSEPPLG QEVVQYMLDT
0801: DNHVWSMRRS KANWFRVITF LSRAATIARW IHGIRTWVHP PTTVLVHLLL VAIVLCPHLV LPTVFMYAFL ILALRFRYRG RVKVNSVDPR LSCVDSVAPD
0901: ELDEEFDGFP TTRQPEVVRI RYDRLRALAG RAQTLLGDVA AQGERVEALF NWRDPRATCI FVVFCLFASF LFYIVPFKVF LLGSGFYYIR HPRFRDDMPS
1001: VPVNFFRRLP SMSDQIL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.