Factsheet for HORVU4Hr1G002160.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G011200.1	Wheat	cytosol, nucleus, plasma membrane	90.68	97.31
TraesCS4A01G300400.1	Wheat	cytosol	89.96	96.54
TraesCS4B01G013400.1	Wheat	cytosol	90.14	95.9
OQU91253	Sorghum	cytosol, nucleus, plasma membrane	80.02	86.2
Zm00001d013654_P001	Maize	plasma membrane	80.47	85.85
GSMUA_Achr10P...	Banana	cytosol	32.26	70.87
Bra036444.1-P	Field mustard	plasma membrane	18.19	69.76
KRH57988	Soybean	cytosol	54.3	62.35
VIT_08s0056g01530.t01	Wine grape	cytosol	55.56	62.25
CDY29951	Canola	cytosol	56.81	62.1
CDY21171	Canola	cytosol	56.45	61.95
AT3G03680.1	Thale cress	cytosol	56.27	61.75
KRH04520	Soybean	cytosol	54.57	61.7
Bra036443.1-P	Field mustard	cytosol	56.54	61.68
Solyc01g007170.2.1	Tomato	cytosol	52.42	61.58
PGSC0003DMT400054936	Potato	cytosol	55.29	61.27
HORVU5Hr1G053320.2	Barley	cytosol	34.68	50.19
HORVU5Hr1G073350.1	Barley	cytosol	34.77	50.13
HORVU7Hr1G094580.2	Barley	cytosol	34.32	46.94
HORVU1Hr1G075050.2	Barley	mitochondrion	32.62	45.22
HORVU7Hr1G110440.4	Barley	cytosol, plastid	42.65	43.95
HORVU6Hr1G090200.1	Barley	cytosol	39.87	43.84
HORVU6Hr1G090330.2	Barley	cytosol	39.87	43.84
HORVU2Hr1G123760.1	Barley	cytosol	39.34	43.21
HORVU6Hr1G063800.1	Barley	cytosol	29.21	41.96
HORVU1Hr1G001710.1	Barley	mitochondrion	29.84	40.71
HORVU4Hr1G079830.2	Barley	plasma membrane	36.65	38.99
HORVU2Hr1G126730.1	Barley	cytosol, nucleus, plasma membrane	36.2	38.73
HORVU2Hr1G123810.1	Barley	cytosol	4.48	23.7
HORVU7Hr1G109210.1	Barley	plastid	4.03	17.93
HORVU2Hr1G082010.3	Barley	cytosol	14.96	17.41

Protein Annotations

EnsemblPlants:HORVU4Hr1G002160.1	EnsemblPlantsGene:HORVU4Hr1G002160	Gene3D:2.60.40.150	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008	InterPro:IPR035892	InterPro:PRibTrfase_C	PANTHER:PTHR10024
PANTHER:PTHR10024:SF172	PFAM:PF00168	PFAM:PF08372	PFscan:PS50004	SEG:seg	SMART:SM00239
SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI000B46CA52	UniProt:A0A287MX72	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr4H:-:3822040..3825680

Molecular Weight (calculated)

122221.0 Da

IEP (calculated)

9.431

GRAVY (calculated)

-0.349

Length

1116 amino acids

Sequence
(BLAST)

0001: VTHRHRPPPT VTSPSSLSIA LTITALIPQR PQISPRFDHF PRPRSFQDRI RSQARSVKQG AFAPAMVEME EGARRRVVVE VCNARNLMPK DGQGTACAYA
0101: VVDFDGQRRR TATRPRDLNP HWGERLEFLL HHPDAMADTL ELNVYNDKKA VAGTGSGRRG GTFLGKVKVA AASFARAGDE ALVYYPLEKR SVFSQIKGEI
0201: GLKIWFVDDP PPAPAAAPAP APEGEKAQAD APAPAAEEKK EPAEAAAAAA PAAAGEKKPE AAAPAEGKKA EDAKPEEKKA EDAGKKKSPE KGKKKDGDKP
0301: KDGEKPKEEG KKEVAVPPSP SKAPPPSPSK MQLATAGVAG DLEILPQTAA ERSMASSGGG SASYDLVDRV PYLFVRLLKA KKNQDGGDKQ PLYAQLCIGA
0401: HAVRTRAATA AGEWDQVFAF HKASLTASSL EVTVHEEAKK PEKEGEATPP DAHLGFVSFD LQEVPKRSPP DSALAPQWYT LEGHAEDGAP ACDVMLAVWV
0501: GTQVDEAFQE AWQSDSGGNL VHTRSKAYLS PKLWYLRLSV IQAQDLRLPS PPDGKAKQFG PTFPELYVKA QLGAQVFKTG RIALGSAAAG ASNPSWNEDL
0601: LFVAAEPFDP FLTVAVEDVF SGQPVGQARV PLSTVHRRSD DRVEPPSRWL NLCGDEARPY AGRVHVRVCL EGGYHVLDEA ANVASDVRAA SKQLSKPPVG
0701: MLEVGVRGAS NLVPMKIAKD GASGSTDAYV VLKYGPKWAR TRTILDQFNP RWNEQYAWDV FDPCTVLSIA VFDNARYKQQ SADGKQQQHK DARIGKLRIR
0801: LSTLDTNRVY AINYALTAVH PVGVRKMGEL ELGIRFTCPS WLTLMQAYGS PLLPRMHYVK PLGPAQQDVL RHTAMRIVSG RLARSEPPLG PEVVQYMLDT
0901: DTHAWSMRRS KANWFRVVGC LSHVATAVRW GHRVRTWEHS PTTVLVHMLL VAVVLCPEMI LPTVCLYLFL VLLWRYRWRP REPAGMDPRL SHVDSVSPDE
1001: LDEEFDGLPS GRPADVVRMR YDRLRAVAGR AQTLLGDVAA QGERVEALLS WRDPRATGVF AVACLLTALV LYAVPFKALL LGMGFFYLRH PRFRGDMPSA
1101: AFNFFRRLPS LSDRVL

Best Arabidopsis Sequence Match ( AT3G03680.1 )
(BLAST)

0001: MADNVLRKLI VEICSARNLM PKDGQGTASA YAIVDFDGQR RRTKTKFRDL NPQWDEKLEF FVHDVATMGE EILEINLCND KKTGKRSTFL GKVKIAGSAF
0101: ASAGSETLVY YPLEKRSVFS QIKGEIGLKA YYVDENPPAA PAATEPKPEA AAATEEKPPE IAKAEDGKKE TEAAKTEEKK EGDKKEEEKP KEEAKPDEKK
0201: PDAPPDTKAK KPDTAVAPPP PPAEVKNPPI PQKAETVKQN ELGIKPENVN RQDLIGSDLE LPSLTRDQNR GGGYDLVDRM PFLYIRVAKA KRAKNDGSNP
0301: VYAKLVIGTN GVKTRSQTGK DWDQVFAFEK ESLNSTSLEV SVWSEEKIEK EDKTTTTTES CLGTVSFDLQ EVPKRVPPDS PLAPQWYTLE SEKSPGNDVM
0401: LAVWLGTQAD EAFQEAWQSD SGGLIPETRS KVYLSPKLWY LRLTVIQTQD LQLGLGSEAK SKIPTTELYV KAQLGPQVFK TARTSIGPSA SSSGSGNPTW
0501: NEDLVFVASE PFEPFLIVTV EDITNGQSIG QTKIHMGSVE RRNDDRTEPK SRWFNLAGDE KKPYSGRIHV KVCLEGGYHV LDEAAHVTSD VRPSAKQLAK
0601: PPIGLLEVGI RGATNLLPVK TRDGTRGTTD AYVVAKYGPK WIRTRTILDR FNPRWNEQYT WDVYDPCTVL TIGVFDNGRY KRDESGKQGR DVRVGKIRVR
0701: LSTLDMNRIY LNSYTLTVIL PSGAKKMGEV EIAVRFSCPS WLSIIQAYVT PMLPRMHYVR PLGPAQQDIL RHTAMRIVTA RLARSEPPLG QEVVQYMLDT
0801: DNHVWSMRRS KANWFRVITF LSRAATIARW IHGIRTWVHP PTTVLVHLLL VAIVLCPHLV LPTVFMYAFL ILALRFRYRG RVKVNSVDPR LSCVDSVAPD
0901: ELDEEFDGFP TTRQPEVVRI RYDRLRALAG RAQTLLGDVA AQGERVEALF NWRDPRATCI FVVFCLFASF LFYIVPFKVF LLGSGFYYIR HPRFRDDMPS
1001: VPVNFFRRLP SMSDQIL

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SS68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.