Factsheet for VIT_08s0056g01530.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036444.1-P	Field mustard	plasma membrane	22.89	78.35
KRH57988	Soybean	cytosol	75.5	77.37
KRH04520	Soybean	cytosol	76.61	77.31
PGSC0003DMT400054936	Potato	cytosol	73.9	73.09
Solyc01g007170.2.1	Tomato	cytosol	69.28	72.63
AT3G03680.1	Thale cress	cytosol	74.1	72.57
CDY21171	Canola	cytosol	73.69	72.17
Bra036443.1-P	Field mustard	cytosol	73.69	71.75
CDY29951	Canola	cytosol	73.49	71.69
GSMUA_Achr10P...	Banana	cytosol	32.53	63.78
TraesCS4A01G300400.1	Wheat	cytosol	62.35	59.71
Zm00001d013654_P001	Maize	plasma membrane	62.65	59.66
TraesCS4D01G011200.1	Wheat	cytosol, nucleus, plasma membrane	62.25	59.62
TraesCS4B01G013400.1	Wheat	cytosol	62.25	59.1
OQU91253	Sorghum	cytosol, nucleus, plasma membrane	61.14	58.78
HORVU4Hr1G002160.1	Barley	plastid	62.25	55.56
VIT_08s0007g06170.t01	Wine grape	cytosol	40.26	51.61
VIT_08s0007g06140.t01	Wine grape	cytosol	39.46	49.5
VIT_17s0000g05700.t01	Wine grape	cytosol	49.2	48.56
VIT_06s0004g01550.t01	Wine grape	cytosol, peroxisome, plasma membrane	37.05	48.17
VIT_13s0064g01400.t01	Wine grape	cytosol	37.95	47.73
VIT_04s0023g03270.t01	Wine grape	plasma membrane	7.93	47.59
VIT_02s0087g00450.t01	Wine grape	extracellular	4.32	46.24
VIT_07s0005g04770.t01	Wine grape	cytosol	44.28	43.58
VIT_15s0046g03030.t01	Wine grape	cytosol	43.98	43.03
VIT_18s0072g01170.t01	Wine grape	cytosol	42.97	42.71
VIT_13s0064g01380.t01	Wine grape	cytosol	46.39	41.73
VIT_02s0025g03610.t01	Wine grape	cytosol	44.78	28.48

Protein Annotations

EntrezGene:100253604	wikigene:100253604	Gene3D:2.60.40.150	MapMan:35.1	EMBL:AM466925	InterPro:C2_dom
InterPro:C2_domain_sf	ProteinID:CAN63720	ProteinID:CAN63720.1	ProteinID:CCB56017	ProteinID:CCB56017.1	UniProt:F6HMN5
EMBL:FN595995	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892
EntrezGene:LOC100253604	wikigene:LOC100253604	PFAM:PF00168	PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004
PANTHER:PTHR10024	PANTHER:PTHR10024:SF172	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI00015CD05E
ArrayExpress:VIT_08s0056g01530	EnsemblPlantsGene:VIT_08s0056g01530	EnsemblPlants:VIT_08s0056g01530.t01	RefSeq:XP_002276331	RefSeq:XP_002276331.1	SEG:seg

Description

No Description!

Coordinates

chr8:-:2442681..2445720

Molecular Weight (calculated)

111864.0 Da

IEP (calculated)

6.887

GRAVY (calculated)

-0.389

Length

996 amino acids

Sequence
(BLAST)

001: MAETCSRKLV VEICNAKNLM PKDGQGTASA YVIVDFDGQR RRTKTKFRDL NPQWDETLEF LVQDPESMAS EILEINVYND KKTGKRTTFL GKVKIAGSTF
101: AKAGSEDLVY YPLEKRSVFS QIKGEIGLKI SYVDEDVPPE PEKAAAEEKK PDEAAVAPSE QKTDDAAAAP AATEEKAPEK EEEKKADESN KEAADQKPAE
201: PPKDEKAEEA PAAAASPPAE VENPPVAHTE KAIQTKETTE TEKRPDLGVS DLELRSLAGD RGRRAYDLVD RMPFLYVRVV KAKGANSEAE STVYAKLVIG
301: THSVRTKSKS DKDWDQVFAF DKEGLNCTSL EVSVWVEKKD GENCTETSIG AVSFDLQEVP KRVPPDSPLA PQWYTLEDSS ENSPGNDIML AVWIGTQADE
401: AFQEAWQSDS GGLIPETRAK VYLSPKLWYL RLTVIQSQDL QLGSGPEAKA KGPELYVKAQ LGAQVFKTAR TSIGSSNPTW NEDLLFVAAE PFEQFLVMTV
501: EDVTSGQPVG HAKVHVPSLD RRTDDTTESK SRWFNLVGDE KRPYAGRIHV RACLEGGYHV LDEAAHVTSD VRASAKQLAK PPIGLLEVGI RGATNLLPVK
601: SKDGTRGTTD AYVVAKYGPK WVRTRTILDR FNPRWNEQYT WDVYDPCTVL TIGVFDNARY KQDEAGKPGR DIRMGKIRVR LSTLDTNRVY TNSYSLTVLL
701: PGGSKRMGEI EIAVRFSCSS WLNLIQAYAS PMLPRMHYVR PLGPAQQDIL RHTAMRIVTA RLARSEPALG QEVVQYMLDS DTHVWSMRRS KANWFRVLGW
801: LSRAATLARW LDGIRTWVHP PTTILMHVFL VAVILCPHLV LPTVFMYAFF IIVLRFRYRR RVLLSMDTRL SYAEAISADE LDEEFDSFPT IKSIDQVRQR
901: YDRLRILAGR AQTLLGDMAA QGERLEALFN WRDPRATGLF VVFCLVASLV FYTVPFRAFV LGWGFYYLRH PRFRGDMPSV PFNFFRRLPS LSDQIL

Best Arabidopsis Sequence Match ( AT3G03680.1 )
(BLAST)

0001: MADNVLRKLI VEICSARNLM PKDGQGTASA YAIVDFDGQR RRTKTKFRDL NPQWDEKLEF FVHDVATMGE EILEINLCND KKTGKRSTFL GKVKIAGSAF
0101: ASAGSETLVY YPLEKRSVFS QIKGEIGLKA YYVDENPPAA PAATEPKPEA AAATEEKPPE IAKAEDGKKE TEAAKTEEKK EGDKKEEEKP KEEAKPDEKK
0201: PDAPPDTKAK KPDTAVAPPP PPAEVKNPPI PQKAETVKQN ELGIKPENVN RQDLIGSDLE LPSLTRDQNR GGGYDLVDRM PFLYIRVAKA KRAKNDGSNP
0301: VYAKLVIGTN GVKTRSQTGK DWDQVFAFEK ESLNSTSLEV SVWSEEKIEK EDKTTTTTES CLGTVSFDLQ EVPKRVPPDS PLAPQWYTLE SEKSPGNDVM
0401: LAVWLGTQAD EAFQEAWQSD SGGLIPETRS KVYLSPKLWY LRLTVIQTQD LQLGLGSEAK SKIPTTELYV KAQLGPQVFK TARTSIGPSA SSSGSGNPTW
0501: NEDLVFVASE PFEPFLIVTV EDITNGQSIG QTKIHMGSVE RRNDDRTEPK SRWFNLAGDE KKPYSGRIHV KVCLEGGYHV LDEAAHVTSD VRPSAKQLAK
0601: PPIGLLEVGI RGATNLLPVK TRDGTRGTTD AYVVAKYGPK WIRTRTILDR FNPRWNEQYT WDVYDPCTVL TIGVFDNGRY KRDESGKQGR DVRVGKIRVR
0701: LSTLDMNRIY LNSYTLTVIL PSGAKKMGEV EIAVRFSCPS WLSIIQAYVT PMLPRMHYVR PLGPAQQDIL RHTAMRIVTA RLARSEPPLG QEVVQYMLDT
0801: DNHVWSMRRS KANWFRVITF LSRAATIARW IHGIRTWVHP PTTVLVHLLL VAIVLCPHLV LPTVFMYAFL ILALRFRYRG RVKVNSVDPR LSCVDSVAPD
0901: ELDEEFDGFP TTRQPEVVRI RYDRLRALAG RAQTLLGDVA AQGERVEALF NWRDPRATCI FVVFCLFASF LFYIVPFKVF LLGSGFYYIR HPRFRDDMPS
1001: VPVNFFRRLP SMSDQIL

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SS68]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.