Factsheet for VIT_13s0064g01380.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13902	Soybean	mitochondrion	59.89	81.85
KRH43469	Soybean	mitochondrion	59.8	81.63
VIT_08s0007g06140.t01	Wine grape	cytosol	57.72	80.48
VIT_04s0023g03270.t01	Wine grape	plasma membrane	11.65	77.71
VIT_02s0087g00450.t01	Wine grape	extracellular	6.41	76.34
VIT_08s0007g06170.t01	Wine grape	cytosol	50.86	72.46
Solyc01g086720.2.1	Tomato	cytosol	70.91	72.22
PGSC0003DMT400065015	Potato	cytosol	71.27	70.76
AT5G48060.1	Thale cress	cytosol	63.41	67.76
CDX86328	Canola	cytosol	62.33	67.71
KRH36455	Soybean	cytosol	71.27	66.86
VIT_06s0004g01550.t01	Wine grape	cytosol, peroxisome, plasma membrane	45.89	66.32
KRH27512	Soybean	cytosol	70.64	66.27
Bra037512.1-P	Field mustard	cytosol	63.05	65.6
VIT_13s0064g01400.t01	Wine grape	cytosol	44.81	62.63
VIT_15s0046g03030.t01	Wine grape	cytosol	51.85	56.39
VIT_07s0005g04770.t01	Wine grape	cytosol	50.05	54.74
VIT_18s0072g01170.t01	Wine grape	cytosol	49.23	54.39
VIT_17s0000g05700.t01	Wine grape	cytosol	44.44	48.76
VIT_08s0056g01530.t01	Wine grape	cytosol	41.73	46.39
VIT_02s0025g03610.t01	Wine grape	cytosol	51.67	36.53

Protein Annotations

EntrezGene:100257873	wikigene:100257873	Gene3D:2.60.40.150	MapMan:35.1	InterPro:C2_dom	InterPro:C2_domain_sf
ProteinID:CCB49482	ProteinID:CCB49482.1	UniProt:F6HB98	EMBL:FN595509	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892	EntrezGene:LOC100257873	wikigene:LOC100257873	PFAM:PF00168
PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR10024	PANTHER:PTHR10024:SF201	SMART:SM00239
SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI000210A3CF	ArrayExpress:VIT_13s0064g01380	EnsemblPlantsGene:VIT_13s0064g01380	EnsemblPlants:VIT_13s0064g01380.t01
RefSeq:XP_002265157	RefSeq:XP_002265157.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr13:+:23261070..23264882

Molecular Weight (calculated)

126654.0 Da

IEP (calculated)

9.042

GRAVY (calculated)

-0.386

Length

1107 amino acids

Sequence
(BLAST)

0001: MAMKETQPIF HPRGNQSKTE YFFLEDSSPF SVKPPSFWFE GGEMLLTHTT SCSSEVRRKR GMKLVVEIVD AHDLLPRDGE GSASPFVEVD FENQRSRTTT
0101: VPKNLNPVWN QKLLFNFDQA KNHHHQTIEV CIYHERRQIS SRAFLGRARI PCSTVVKKGE EVYQTFQLEK KRFFSSIKGE VGLKIYLSSE TEPSSPAPSS
0201: SPPPPSSPPP SSENRNLIHN PSIPLPISEV PVSNILNSSP SITRVSLIEK SSSPIPEAES PRSSVEEPKE EIKEPVEVRV EANPHIYKYQ VLQQPAISVE
0301: KGPQGISSTM HQANPDIHPS PQDDYNLKEM DPQLGERWPG GGVYGGRGWM SGERFATTYD LVEQMYYLYV RVVKAKDLPP GALTGSCDPY VEVKLGNYKG
0401: RTRHFEKKMN PEWNQVFAFS KDRIQSSSLE VFVKDKEMVG RDDYLGRVVF DMNEVPTRVP PDSPLAPQWY RLEDRRGEGK VRGNIMLAVW LGTQADEAFS
0501: EAWHSDAASV HGEGVSSIRS KVYVSPKLWY LRVNVIEAQD IQPNDRSRVP EVFVKAQVGS QVLRSKICPT RTTNPLWNED LVFVAAEPFE DQLVLTVEDR
0601: VHPSKDDVLG RVSMPLTAFE KRLDHRPVHS TWFHLEKFGF GTLEADRRKE LKFSSRIHVR VCLEGGYHVL DESTMYISDQ RPTARQLWKQ PIGILEVGIL
0701: GAQGLLPMKM KDSRGSTDAY CVARYGQKWV RTRTIIDTFS PKWNEQYTWE VYDPCTVITL GVFDNCHLGG AEKLNGGGAV RDSRIGKVRI RLSTLESHRI
0801: YIHSYPLLVL QPTGVKKMGE LQLAIRFTSL SLANMIYAYG HPLLPKMHYL HPLTVNQVDS LRYQAMNIVA TRLGRAEPPL RKEVVEYMLD VDSHMWSMRR
0901: SKANFFRIMS LLSGVITMSR WFGNVCHWKN PITSVLVHIL FLILIWYPEL ILPTIFLYMF LIGIWNYRFR PRHPPHMDTK LSWAEAVQPD ELDEEFDTFP
1001: TSRSQDRVYM RYDRLRSVAG RIQTVVGDLA TQGERFQSLL SWRDPRATSL FIMFCLCTAL VLYMTPFRAV ALVAGLYMLR HPRFRSKLPS IPNNFFKRLP
1101: PRTDSLL

Best Arabidopsis Sequence Match ( AT5G48060.1 )
(BLAST)

0001: MRNTTKLVVH VVDAQYLMPR DGQGSASPFV EVDFLNQLSK TRTVPKSLNP VWNQKLYFDY DQSVINQHNQ HIEVSVYHER RPIPGRSFLG RVKISLCNIV
0101: YKDDQVYQRF TLEKKWLLSS VKGEIGLKFY ISSSEEDQTF PLPSKPYTSP TQASASGTEE DTADSETEDS LKSFASAEEE DLADSVSECV EGKKSEEVKE
0201: PVQKLHRQEV FARPAPMQSI RLRSRENPHE AQKPMSRGAN QLHPQNPNHL QSYGDTDLDD FKVKDMNLDL GERWPNPNAG ERFTGTYDLV EQMFYLYVRV
0301: VKAKELPPGS ITGGCDPYVE VKLGNYKGRT KIFDRKTTIP EWNQVFAFTK ERIQSSVLEV FVKDKETLGR DDILGKVVFD LNEIPTRVPP NSPLAPQWYR
0401: LEDWRGEGKV VRGEIMLAVW MGTQADEAFP EAWHADSASV HGEGVFNIRS KVYVSPKLWY LRVNVIEAQD MIPSDRNRLP DVFVKASVGM QTLKTSICSI
0501: KTTNPLWKED LVFVVAEPFE EQLVISVEDR VHTSKDEVIG KITLPMNVFE KRLDHRPVHS RWFNLDKYGT GVLEPDARRK EHKFSSRIHL RICLEGGYHV
0601: MDESTMYISD TRPTARQLWK QPVGMLEIGI LGANGLVPMK LKDGRGSTNA YCVAKYGQKW VRTRTILDTL SPRWNEQYTW EVYDPCTVIT LGVFDNSHLG
0701: SAQSGTADSR DARIGKVRIR LSTLEAHKIY THSFPLLVLQ PHGLKKTGDL QISVRFTTLS LANIIYNYGH PLLPKMHYLF PFTVNQVDGL RYQAMNIVST
0801: RLGRAEPPLR KEVVEYMLDV DSHLWSMRRS KANFFRIMSL LSGYFLVGKW LEDVCNWRYP VTSVLVNVLF FILVMYPELI LPTMFLYMFF IGLWNFRSRP
0901: RHPPHMDMKL SWAEAVGPDE LDEEFDTFPT SRSQELVRLR YDRLRSVAGR IQTVVGDIAA QGERIQSLLS WRDPRATSLF ILFCLAASVV LYAMPFKAIA
1001: LASGLYYLRH PKFRSKLPSL PSNFFKRLPS STDSLL

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FI32]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.