Factsheet for VIT_08s0007g06170.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g080420.1.1	Tomato	nucleus	64.22	91.9
AT3G57880.3	Thale cress	cytosol	89.32	89.78
KRH67030	Soybean	endoplasmic reticulum, mitochondrion, nucleus	89.32	89.55
KRG95352	Soybean	endoplasmic reticulum	89.32	89.55
Bra003302.1-P	Field mustard	cytosol	88.93	89.28
CDX67712	Canola	cytosol	88.93	89.28
CDX98254	Canola	cytosol	88.93	89.28
CDY69710	Canola	cytosol	88.93	88.7
Bra014601.1-P	Field mustard	cytosol	88.8	88.69
PGSC0003DMT400060959	Potato	cytosol	87.52	88.66
KRH32992	Soybean	cytosol	88.03	88.49
Solyc10g078680.1.1	Tomato	cytosol	85.46	88.06
PGSC0003DMT400029745	Potato	cytosol	87.52	87.97
PGSC0003DMT400060862	Potato	cytosol	87.39	87.84
AT1G51570.1	Thale cress	cytosol	87.13	87.24
Solyc10g080430.1.1	Tomato	nucleus	86.74	87.08
Os05t0370600-01	Rice	plastid	83.91	84.24
CDY47660	Canola	endoplasmic reticulum	88.8	83.33
GSMUA_Achr9P12510_001	Banana	cytosol	43.24	82.96
HORVU5Hr1G073350.1	Barley	cytosol	82.63	82.95
TraesCS5D01G273300.1	Wheat	cytosol	82.63	82.95
TraesCS5B01G265100.1	Wheat	cytosol	82.5	82.82
TraesCS5A01G265400.1	Wheat	cytosol	82.37	82.69
EER90047	Sorghum	cytosol	82.24	82.45
Zm00001d046749_P001	Maize	mitochondrion	81.6	81.81
Zm00001d036801_P001	Maize	plasma membrane	81.47	81.78
TraesCS5B01G171600.1	Wheat	cytosol	77.22	77.82
HORVU5Hr1G053320.2	Barley	cytosol	76.71	77.3
TraesCS5D01G178600.1	Wheat	cytosol	76.71	77.3
VIT_06s0004g01550.t01	Wine grape	cytosol, peroxisome, plasma membrane	76.06	77.15
PGSC0003DMT400011904	Potato	cytosol	75.03	75.62
PGSC0003DMT400011903	Potato	cytosol	53.02	73.05
TraesCS5A01G174100.1	Wheat	cytosol	70.91	72.21
VIT_08s0007g06140.t01	Wine grape	cytosol	72.46	70.91
VIT_13s0064g01400.t01	Wine grape	cytosol	69.24	67.93
VIT_02s0087g00450.t01	Wine grape	extracellular	7.98	66.67
Solyc02g044030.1.1	Tomato	cytosol, nucleus, unclear	28.7	65.78
VIT_04s0023g03270.t01	Wine grape	plasma membrane	13.9	65.06
PGSC0003DMT400013490	Potato	cytosol	43.89	63.27
VIT_15s0046g03030.t01	Wine grape	cytosol	69.11	52.75
VIT_13s0064g01380.t01	Wine grape	cytosol	72.46	50.86
VIT_18s0072g01170.t01	Wine grape	cytosol	65.51	50.8
VIT_07s0005g04770.t01	Wine grape	cytosol	62.81	48.22
VIT_17s0000g05700.t01	Wine grape	cytosol	54.18	41.72
VIT_08s0056g01530.t01	Wine grape	cytosol	51.61	40.26
VIT_02s0025g03610.t01	Wine grape	cytosol	71.94	35.7

Protein Annotations

EntrezGene:100252023	wikigene:100252023	Gene3D:2.60.40.150	MapMan:35.1	InterPro:C2_dom	InterPro:C2_domain_sf
ProteinID:CCB55267	ProteinID:CCB55267.1	UniProt:F6HLL1	EMBL:FN595991	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892	EntrezGene:LOC100252023	wikigene:LOC100252023	PFAM:PF00168
PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR10024	PANTHER:PTHR10024:SF243	SMART:SM00239
SUPFAM:SSF49562	TIGR:TC60583	TMHMM:TMhelix	UniParc:UPI00015CB0C7	ArrayExpress:VIT_08s0007g06170	EnsemblPlantsGene:VIT_08s0007g06170
EnsemblPlants:VIT_08s0007g06170.t01	unigene:Vvi.5690	RefSeq:XP_002278165	RefSeq:XP_002278165.1	RefSeq:XP_010653909.1	RefSeq:XP_019077322.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:19980981..19983618

Molecular Weight (calculated)

89359.4 Da

IEP (calculated)

9.386

GRAVY (calculated)

-0.280

Length

777 amino acids

Sequence
(BLAST)

001: MHRPPPDDFS LKETSPHLGG GKVTGDKLTS TYDLVEQMQY LYVRVVKAKD LPSKDVTGSC DPYVEVKLGN YKGTTPHFEK KTNPEWNRVF AFSKDRMQAS
101: MLEVIVKDKD FVKDDYIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGGELMLA VWMGTQADEA FPDAWHSDAA AVSGSDGLAN MRSKVYLSPK
201: LWYLRVNVIE AQDLQPTDRG RYPEVFVKAI LGNQALRTRI SQIKSINPMW NEDLMFVASE PFEEPLILSV EDRVGNNKDE VLGRCAIPLQ YVDRRFDHKI
301: MNSRWFNLEK HIVVDGEQKK KEIKFASRIH LRICLEGGYH VLDESTHYSS DLRPTEKRLW KSSIGVLELG ILNAQGLLPM KTKDGRGTTD AYCVAKYGQK
401: WVRTRTIIDS STPKWNEQYT WEVYDPCTVI TIGVFDNCHL HGGDKAGGAT KDSRIGKVRI RLSTLETDRV YTHSYPLLVL HPTGVKKMGE IHLAVRFTCS
501: SLLNMMHMYS QPLLPKMHYL HPLTVNQLDS LRHQATQIVS MRLSRAEPPL RKEVVEYMLD VGSHMWSMRR SKANFFRIMG VLGGLIAVGK WFDQICNWKN
601: SITTVLIHIL FFILVMYPEL ILPTIFLYLF LIGVWYFRWR PRHPPHMDTR LSHADSAHPD ELDEEFDTFP TSRPSDVVRM RYDRLRSIAG RIQTVVGDLA
701: TQGERLQSLL SWRDPRATAL FVLFCLVAAI VLYVTPFQVV ALLTGFYVLR HPRFRHKLPS VPLNFFRRLP ARTDCML

Best Arabidopsis Sequence Match ( AT3G57880.4 )
(BLAST)

001: MQRPPPEDFS LKETRPHLGG GKLSGDKLTS TYDLVEQMQY LYVRVVKAKE LPGKDMTGSC DPYVEVKLGN YKGTTRHFEK KSNPEWNQVF AFSKDRIQAS
101: FLEATVKDKD FVKDDLIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV
301: NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR
401: TRTIIDSFTP RWNEQYTWEV FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG VKKMGEIHLA VRFTCSSLLN
501: MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT RAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT
601: VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE
701: RLQSLLSWRD PRATALFVLF CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML

Arabidopsis Description

Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.