Factsheet for VIT_06s0004g01550.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g06170.t01	Wine grape	cytosol	77.15	76.06
KRH10160	Soybean	cytosol	74.93	74.16
KRH23178	Soybean	cytosol	74.67	73.81
KRH29670	Soybean	cytosol	74.41	73.36
AT5G12970.1	Thale cress	cytosol	73.37	73.08
Bra006172.1-P	Field mustard	cytosol	72.58	72.3
Os05t0370600-01	Rice	plastid	72.98	72.22
CDX78498	Canola	cytosol	72.45	72.17
EER90047	Sorghum	cytosol	72.98	72.13
CDY68091	Canola	cytosol	72.19	71.91
Bra008867.1-P	Field mustard	cytosol	72.06	71.78
CDX70485	Canola	cytosol	72.06	71.78
CDX97214	Canola	cytosol	72.06	71.78
TraesCS5D01G273300.1	Wheat	cytosol	72.45	71.71
TraesCS5A01G265400.1	Wheat	cytosol	72.32	71.58
TraesCS5B01G265100.1	Wheat	cytosol	72.32	71.58
HORVU5Hr1G073350.1	Barley	cytosol	72.32	71.58
Zm00001d046749_P001	Maize	mitochondrion	72.19	71.35
Zm00001d036801_P001	Maize	plasma membrane	71.54	70.8
TraesCS5B01G171600.1	Wheat	cytosol	68.41	67.96
PGSC0003DMT400055029	Potato	cytosol	67.89	67.71
TraesCS5D01G178600.1	Wheat	cytosol	68.02	67.57
HORVU5Hr1G053320.2	Barley	cytosol	67.89	67.44
Solyc01g006620.2.1	Tomato	cytosol	67.49	67.32
VIT_08s0007g06140.t01	Wine grape	cytosol	66.06	63.73
TraesCS5A01G174100.1	Wheat	cytosol	63.32	63.56
VIT_04s0023g03270.t01	Wine grape	plasma membrane	13.58	62.65
VIT_13s0064g01400.t01	Wine grape	cytosol	64.36	62.25
VIT_15s0046g03030.t01	Wine grape	cytosol	63.32	47.64
VIT_18s0072g01170.t01	Wine grape	cytosol	60.05	45.91
VIT_13s0064g01380.t01	Wine grape	cytosol	66.32	45.89
VIT_07s0005g04770.t01	Wine grape	cytosol	56.4	42.69
VIT_02s0087g00450.t01	Wine grape	extracellular	4.96	40.86
VIT_17s0000g05700.t01	Wine grape	cytosol	49.74	37.76
VIT_08s0056g01530.t01	Wine grape	cytosol	48.17	37.05
VIT_02s0025g03610.t01	Wine grape	cytosol	66.32	32.44

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	EMBL:AM488778	InterPro:C2_dom	InterPro:C2_domain_sf	ProteinID:CAN75499
ProteinID:CAN75499.1	ProteinID:CCB43744	ProteinID:CCB43744.1	UniProt:F6GUA2	EMBL:FN594951	GO:GO:0005575
GO:GO:0009506	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892	PFAM:PF00168
PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004	PANTHER:PTHR10024	PANTHER:PTHR10024:SF243	SMART:SM00239
SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI000210894A	ArrayExpress:VIT_06s0004g01550	EnsemblPlantsGene:VIT_06s0004g01550	EnsemblPlants:VIT_06s0004g01550.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6:+:1919090..1921800

Molecular Weight (calculated)

87806.8 Da

IEP (calculated)

9.675

GRAVY (calculated)

-0.212

Length

766 amino acids

Sequence
(BLAST)

001: MQKPPPSVEF ALKETKPQLG GGSVIGDKLT CAYDLVEQMH YLYVRVVKAK DLPPKDVTGS CDPYIEVKLG NYKGVTKHFE KKTNPVWNQV FAFSKDRLQA
101: SVLEVVVKDK DFVKDDFMGK VSFDLHEVPR RVPPDSPLAP QWYRLEDRKG EKAKGELMLA VWMGTQADEA FPDAWHSDAA TVSIENITHI RSKVYLSPKL
201: WYLRVNIIEA QDLVPSDKSR YPEVFVKGTL GNQALRTRTS QIKSINPMWN EDLIFVAADP FEEPLVLTVE DRVASNKDEV LGKCVIALQN VQRRLDHKPI
301: NWRWYNLEKH VLVDGELKKE TKFASRLCMR ICLEGGYHVF DESTQYSSDF RPTAKPLWKP SIGILEVGIL SAQGLAQMKT KDGRGTTDAY CVAKYGRKWV
401: RTRTIIDNFN PKWNEQYIFE VFDPCTVITL GVFDNCHLHG GDKTGGTKDL IIGKVRIRLS ILESERVYTH SYPLIVLQSK GVKKMGEIQL AVDSLRHQAT
501: QLLSVRLGRA EPPLRKEVVG YMLDVDSHMW SMRRSKANFF RIMGVIGGLI AVGKWFNNIC NWKNPLTTIL IHILFVILVL FPELILPTIL LYLFFIALWN
601: FRRRPRHPPH MDIQLSHAHA AHPDELDEEF DTFPTSKPSD LVRMRYDRLR SIAGRIQTVA GDMATQGERF QSLLNWRDPR TTTLFAGACL IGAIVLYVTP
701: FQVLALLAGF YILRHPRFRQ KLPFTPLNFF RRLPSRADNV PHFNLIKSKF QVFCFPSTKQ CLIFNN

Best Arabidopsis Sequence Match ( AT3G57880.4 )
(BLAST)

001: MQRPPPEDFS LKETRPHLGG GKLSGDKLTS TYDLVEQMQY LYVRVVKAKE LPGKDMTGSC DPYVEVKLGN YKGTTRHFEK KSNPEWNQVF AFSKDRIQAS
101: FLEATVKDKD FVKDDLIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV
301: NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR
401: TRTIIDSFTP RWNEQYTWEV FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG VKKMGEIHLA VRFTCSSLLN
501: MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT RAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT
601: VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE
701: RLQSLLSWRD PRATALFVLF CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML

Arabidopsis Description

Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.