Factsheet for VIT_15s0046g03030.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	41.75	72.4
Solyc01g094410.2.1	Tomato	nucleus	71.22	71.85
PGSC0003DMT400000108	Potato	cytosol	71.22	71.85
VIT_08s0007g06170.t01	Wine grape	cytosol	52.75	69.11
GSMUA_Achr1P00330_001	Banana	cytosol	30.45	68.43
KRH65054	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	16.6	68.15
KRH65087	Soybean	endoplasmic reticulum, mitochondrion, nucleus	64.93	65.9
KRH48167	Soybean	endoplasmic reticulum, nucleus	64.73	65.77
CDY42494	Canola	cytosol, plasma membrane	26.52	64.29
VIT_08s0007g06140.t01	Wine grape	cytosol	50.1	64.23
VIT_04s0023g03270.t01	Wine grape	plasma membrane	10.41	63.86
KRH40482	Soybean	cytosol	63.36	63.48
VIT_06s0004g01550.t01	Wine grape	cytosol, peroxisome, plasma membrane	47.64	63.32
EER99386	Sorghum	cytosol	62.48	63.22
KRH00708	Soybean	cytosol	62.67	62.73
Zm00001d006371_P001	Maize	cytosol	61.98	62.35
Bra008528.1-P	Field mustard	cytosol	60.71	62.11
CDY01973	Canola	cytosol	60.31	61.96
CDY54062	Canola	cytosol	60.51	61.91
CDX74344	Canola	cytosol	59.04	61.77
Os07t0483500-01	Rice	cytosol	61.2	61.62
Zm00001d021494_P001	Maize	cytosol	61.89	61.52
Bra000963.1-P	Field mustard	cytosol	58.74	61.52
TraesCS2D01G234800.1	Wheat	cytosol	62.38	61.29
CDX71747	Canola	cytosol	45.58	61.13
CDX91899	Canola	cytosol	58.64	61.04
TraesCS2B01G261000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	62.48	61.04
HORVU4Hr1G079830.2	Barley	plasma membrane	62.28	60.44
TraesCS2A01G238900.1	Wheat	cytosol	62.38	59.79
VIT_13s0064g01400.t01	Wine grape	cytosol	46.46	59.72
AT4G00700.1	Thale cress	cytosol	58.64	59.34
AT3G61300.1	Thale cress	cytosol	55.21	57.82
CDX89108	Canola	cytosol	52.16	57.78
CDY48929	Canola	cytosol	54.62	56.39
Bra007594.1-P	Field mustard	cytosol	54.72	56.04
VIT_02s0087g00450.t01	Wine grape	extracellular	5.11	55.91
VIT_18s0072g01170.t01	Wine grape	cytosol	53.93	54.79
VIT_07s0005g04770.t01	Wine grape	cytosol	52.16	52.47
VIT_13s0064g01380.t01	Wine grape	cytosol	56.39	51.85
CDX71748	Canola	cytosol	8.94	50.28
VIT_02s0025g03610.t01	Wine grape	cytosol	74.56	48.47
VIT_17s0000g05700.t01	Wine grape	cytosol	45.09	45.49
GSMUA_Achr3P03790_001	Banana	cytosol	5.8	45.04
VIT_08s0056g01530.t01	Wine grape	cytosol	43.03	43.98
Bra014445.1-P	Field mustard	cytosol, mitochondrion, plasma membrane, plastid	52.55	36.92

Protein Annotations

EntrezGene:100253432	wikigene:100253432	Gene3D:2.60.40.150	MapMan:35.1	EMBL:AM486307	InterPro:C2_dom
InterPro:C2_domain_sf	ProteinID:CAN79812	ProteinID:CAN79812.1	ProteinID:CCB62401	ProteinID:CCB62401.1	UniProt:F6I605
EMBL:FN596755	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000008	InterPro:IPR035892
EntrezGene:LOC100253432	wikigene:LOC100253432	PFAM:PF00168	PFAM:PF08372	InterPro:PRibTrfase_C	PFscan:PS50004
PANTHER:PTHR10024	PANTHER:PTHR10024:SF219	SMART:SM00239	SUPFAM:SSF49562	TIGR:TC52574	TIGR:TC54566
TIGR:TC69203	TMHMM:TMhelix	UniParc:UPI0001984E72	ArrayExpress:VIT_15s0046g03030	EnsemblPlantsGene:VIT_15s0046g03030	EnsemblPlants:VIT_15s0046g03030.t01
unigene:Vvi.7608	RefSeq:XP_002271590	RefSeq:XP_002271590.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr15:-:19676616..19681368

Molecular Weight (calculated)

115929.0 Da

IEP (calculated)

9.501

GRAVY (calculated)

-0.340

Length

1018 amino acids

Sequence
(BLAST)

0001: MSNLKLGVEV VSAHNLMPKD GQGSASAFVE LHFDNQKFRT TTKEKDLNPV WNESFYFNIS DPNNLSNLNL EAWVYNLVKT TNSKSFLGKV RLTGTSFVPY
0101: SDAAVLHYPL EKRGILSRVK GELGLKVFLT DDPSIRSSNP LPAMESSVLT DSHRTQAQGP VQQVQNIVQN MVQGAFSNDK AEARHTFHHL PNTNVPQQQH
0201: PAAMSQEPGR FGADQMRAEP QGSRIVRMFS GSASQPLDYQ LKETSPILGG GQIVGGRVIR ADKPASTYDL VEQMHYLFVR VVKARDLPTK DVTGSLDPFV
0301: EVRVGNYKGI TKHFEKNKNP EWNEVFAFAG DRMQSSVLEV VVKDKDMLKD DIVGFVRFDL SDVPTRVPPD SPLAPEWYRI ANSKGEKNNG ELMLAVWYGT
0401: QADEAFPDAW HSDAASHHDS SAAGSSYIRS KVYHSPRLWY VRVTIVEAQD LVTTEKTRFP DVYVKAQIGN QILKTKPTQA RTLNPLWNED LIFVVAEPFE
0501: DHLMLSVEDR VGPNKDETIG RTIIPLSAIE KRAEVRHDDR IDRSRWYHLE KAYVMDVDQS KKDKKDKFAS RLRLCLFLEG GYHVHDESTH YSSDLRPSLK
0601: QLWLRTPSIG VLELGILNAD GLHPMKTRDQ KGTSDTYCVA KYGQKWVRTR TIMNSLSPKY NEQYTWEVYD PATVITIGVF DNCHVGGSNG NRDLKIGKVR
0701: IRISTLETGR VYTHTYPLLV LHPNGVKKMG ELHLAIRFSC TSLMNTMLIY SRPLLPKMHY IKPFTVMQQD MLRHQAVNIV AARLSRSEPP LRKEVIEYMS
0801: DMDSHLWSMR RSKANFFRLM SVFSGLIAVG KWFGEVCTWK NPITTGLVHV LFVMLVCFPE LILPTVFLYM FMIGLWNYRG RPRYPPHMNT KISYADNVHP
0901: DELDEEFDSF PTSRGSELVR MRYDRLRSVA GRIQTVVGDV ATQGERFQAL LSWRDPRATT IFLVFCLLVA LVLYITPFQV LALVAGFYHM RHPRFRGRLP
1001: SAPINFFRRL PAKTDSML

Best Arabidopsis Sequence Match ( AT4G11610.1 )
(BLAST)

0001: MMMSNLKLGV DVIGAHNLFP KDGQGTSNAY VELYFDGQKH RTTIKDRDLN PVWNESFFFN ISDPSRLHYL NLEAQAYSHN RSTNGRSFLG KVSLSGTSFV
0101: PHSDAVVLHF PMERRGIFSR VRGELGLKVY ITDEASLKSS AASNDHPDNL DPALPRAMNV EHRSDKRHVF YNLPNSAQEH QHQHPQGPNQ SSSLAAEQDN
0201: HNEHHHHYVP KHQVDEMRSE PARPSKLVHA HSIASAQPAD FALKETSPHL GGGRVVGGRV IHKDKTATST YDLVERMYFL YVRVVKAREL PIMDITGSVD
0301: PFVEVRVGNY KGITRHFEKR QHPEWNQVFA FAKERMQASV LEVVVKDKDL LKDDYVGFVR FDINDVPLRV PPDSPLAPQW YRLEDKKGEK IKGELMLAVW
0401: IGTQADEAFS DAWHSDAAMP VDCSPAISAV LRSKVYHAPR LWYVRVNVIE AQDLIPTDKT RFPDVYVKAQ LGNQVMKTRP CQARTLGAVW NEDFLFVVAE
0501: PFEDHLVLTV EDRVAPGKDE IVGRTYIPLN TVEKRADDHM IHARWYNLER PVIVDVDQLK REKFSMRIHL RVCLEGGYHV LDESTHYSSD LRPSARPLWR
0601: QPIGVLELGI LNAVGLHPMK TREGRGTSDT FCVGKYGQKW VRTRTMVDNL CPKYNEQYTW EVFDPATVLT VGVFDNGQLG EKGNRDVKIG KIRIRLSTLE
0701: TGRIYTHSYP LLVLHPTGVK KMGELHMAVR FTCISFANML YQYSKPLLPK MHYVRPFSVM QQDMLRHQAV NIVAARLGRA EPPLRKEIIE FMSDTDSHLW
0801: SMRKSKANFF RMMTVFSGVI AVGKWFSDIC SWRNPITTVL VHVLFLMLVC LPELILPTMF LYMFLIGLWN YRFRPRYPPH MNTKISQAEA VHPDELDEEF
0901: DTFPTTRNPD MVRLRYDRLR SVAGRIQTVI GDLATQGERF QALLSWRDPR ATAIFVILCF IAAIVFFITP IQIVVALAGF FTMRHPRFRH RLPSVPVNFF
1001: RRLPARTDSM L

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q84TJ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.