CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000963.1-P	Field mustard	cytosol	98.36	98.46
CDX91899	Canola	cytosol	96.4	95.91
CDY54062	Canola	cytosol	90.54	88.54
CDY01973	Canola	cytosol	89.62	87.99
AT4G00700.1	Thale cress	cytosol	81.09	78.43
KRH65054	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	15.93	62.5
CDX81020	Canola	cytosol	25.49	62.16
GSMUA_AchrUn_...	Banana	cytosol	36.49	60.48
GSMUA_Achr1P00330_001	Banana	cytosol	27.85	59.82
CDY69710	Canola	cytosol	47.69	59.56
CDX67712	Canola	cytosol	47.07	59.17
CDX98254	Canola	cytosol	47.07	59.17
VIT_15s0046g03030.t01	Wine grape	cytosol	61.77	59.04
CDY42494	Canola	cytosol, plasma membrane	25.28	58.57
CDX97214	Canola	cytosol	45.84	58.0
Solyc01g094410.2.1	Tomato	nucleus	59.92	57.78
CDX78498	Canola	cytosol	45.63	57.74
CDY68091	Canola	cytosol	45.53	57.61
PGSC0003DMT400000108	Potato	cytosol	59.71	57.58
CDX70485	Canola	cytosol	45.43	57.48
CDY47660	Canola	endoplasmic reticulum	48.3	56.76
CDX98964	Canola	endoplasmic reticulum, extracellular	8.22	56.74
CDX86768	Canola	cytosol	58.48	56.34
KRH65087	Soybean	endoplasmic reticulum, mitochondrion, nucleus	57.66	55.93
KRH48167	Soybean	endoplasmic reticulum, nucleus	57.55	55.89
KRH40482	Soybean	cytosol	57.14	54.72
CDX71747	Canola	cytosol	42.24	54.15
EER99386	Sorghum	cytosol	55.91	54.08
Zm00001d006371_P001	Maize	cytosol	56.01	53.85
KRH00708	Soybean	cytosol	56.12	53.69
Zm00001d021494_P001	Maize	cytosol	56.42	53.61
CDY70344	Canola	cytosol	27.75	53.57
Os07t0483500-01	Rice	cytosol	55.6	53.51
CDX89108	Canola	cytosol	48.51	51.36
TraesCS2D01G234800.1	Wheat	cytosol	54.68	51.35
TraesCS2B01G261000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	54.78	51.15
HORVU4Hr1G079830.2	Barley	plasma membrane	55.09	51.1
TraesCS2A01G238900.1	Wheat	cytosol	54.68	50.09
CDY48929	Canola	cytosol	50.46	49.8
CDX81021	Canola	cytosol	14.59	49.48
CDY04800	Canola	cytosol	50.57	48.86
CDX80994	Canola	cytosol	5.14	48.54
CDY21373	Canola	cytosol	50.57	48.52
CDY13273	Canola	cytosol	22.92	48.27
CDX86328	Canola	cytosol	49.64	47.4
CDY10076	Canola	cytosol, nucleus, plasma membrane	47.17	47.08
CDY32530	Canola	cytosol	47.28	46.51
CDY13087	Canola	cytosol	21.17	44.98
CDY57334	Canola	cytosol	19.73	43.44
CDX71748	Canola	cytosol	7.81	41.99
CDY49185	Canola	cytosol	14.08	40.77
CDX85853	Canola	cytosol	42.75	39.85
CDX68168	Canola	cytosol	42.65	39.71
CDY21171	Canola	cytosol	41.42	39.63
CDY29951	Canola	cytosol	41.52	39.57
CDY38472	Canola	cytosol	40.49	39.28
CDY25472	Canola	cytosol	40.19	39.06
CDY33906	Canola	nucleus	9.66	39.0
CDY35343	Canola	golgi	10.79	37.5
CDX80993	Canola	extracellular	3.39	37.08
GSMUA_Achr3P03790_001	Banana	cytosol	4.83	35.88
CDY35342	Canola	cytosol, peroxisome, plasma membrane	16.86	33.74
CDX77002	Canola	cytosol, peroxisome, plasma membrane	20.14	33.11
CDX71710	Canola	cytosol	25.8	32.9
CDY11377	Canola	cytosol	26.82	32.46

Protein Annotations

EnsemblPlants:CDX74344	EnsemblPlantsGene:GSBRNA2T00112147001	Gene3D:2.60.40.150	GO:A0A078CDU8	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	InterPro:PRibTrfase_C	PANTHER:PTHR10024	PANTHER:PTHR10024:SF219	PFAM:PF00168
PFAM:PF08372	PFscan:PS50004	ProteinID:CDX74344	ProteinID:CDX74344.1	SEG:seg	SMART:SM00239
SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI0004EF1E85	MapMan:35.1	:	:

Description

BnaA03g27030D

Coordinates

chrLK031800:+:2307300..2310573

Molecular Weight (calculated)

110509.0 Da

IEP (calculated)

9.729

GRAVY (calculated)

-0.271

Length

973 amino acids

Sequence
(BLAST)

001: MSKIKLGVEV ISAHGLFNTD KQNSCSPFVE LKFDNQIFRT TTKPNDPNPV WHESFYFTVS DPSFLSTLTL EAHVYSYQDG TDAKPFLGKV RVNGTSFVPH
101: SEAAPFNYPL EKRSVFSRAR GELGLRVFIT EDPSITPSLP TPVPESPRSY IPSPRQEPVK SIITAAANMV AADKPKARTL YNVTPSVNQQ QQPTTAMSYG
201: MQEMRAAAPM PPRVVQYNGP GPSSDFTVKE TSPFLGGGRI IGGRIVRGTQ RPVGTYDLVE EMRFLFVRVV KARDLPDRDL TGSLDPYVEV KIGNFKGVTR
301: HLDKNSDPEW NQVFAFAKEN LQSNVLEIVV KDKDLVLDDY VGTVRFDLNE VQSRVPPDSP LAPEWYRLEN KRGEKKRAEI MLAVWEGTQA DEAFGDAVFS
401: DSLTSSDSSD IISANLRSKV YHSPRLWYLR VKIIEAQDVI IVSDKSRLPE AFVRIQVGNQ MLKTKVAQRS FHPRWDNEFM FVVAEPFEEH LVLSVEDHSA
501: ANRDEPVGKA VIPLSAIERR NDDRAFRSRW FHLEDSISDA MDEDKAKRVN SDLRPTARQL WKQAIGVLEL GILNANGLHP VKNRDGKGTS DTYVVAKYGH
601: KWVRSRTVIN SLNPKYNEQY TWEVLDPATV LTICVFDNGH FSSGNGRDQT IGKVRIRLST LQTGRVYTNA YPLLVLTPSG LKKRGELHLA VRFTCTSVSN
701: TLMKYTKPLL PKMHYTQPLS VNLQEMLRVQ ALNIIVARLG RSEPPLRREV VEYMTDAKTH LFSMRRSKAN FFRFTAVFSG VMSVWKWMGE VCSWRTPVTT
801: GLVHVLYTML VMFPEMILPT VFLYMAVIGL WNYRIRPRFP PHMDTKLSYA ESVNADELDE EFDIFPTMKA PDIVKMRYDR LRIVAGKIQT VVGDIAAQGE
901: RVQALLSWRD PRATAIFVTF CFIVAMVLYI TPFKLFALLS GYYFMRHPKL RHRIPSAPLN FFRRLPAMSD SML

Best Arabidopsis Sequence Match ( AT4G00700.2 )
(BLAST)

0001: MSNIKLGVEV ISAQGLLQRD KHNSCSPFVE LKFDNQIFRA TTKHNDPNPV WHECFYFVVS DPSVLSTRTL EAHVYSYQNE FDAKPFLGKV RVNGTSFVPR
0101: SEAAPFNYPL EKRSVFSRAR GELCLRVFIT DDPSVTPSVP TPVPESPQAY SPSPRKEHVK SLITADASMA TDERRELKPK TRTFHNSAPL VKQQPMMNYG
0201: IHEMRAAPMP PRVVQVNGPG PSLHQLPPDF SVKETSPLLG GGRIVGGRVV RGTERPTSGT YDLVEEMKFL YVRVVKARDL PNKDLTGSLD PYVVVKIGNF
0301: KGVTTHFNKN TDPEWNQVFA FAKDNLQSNF LEVMVKDKDI LLDDFVGIVK FDLREVQSRV PPDSPLAPQW YRLENKRGEK KNYEIMLAVW SGTQADEAFG
0401: DATFSDSLVD SDSSNIISAN LRSKVYHSPR LWYLRVQILE AQDVIIVSDK SRVPEVFVRV KVGNQMLRTK FPQRSNNPKW GDEFTFVVAE PFEDNLVLSV
0501: EDHTAPNRDE PVGKAVILMN DIEKRIDDKP FHDRWVHLED SISDAMDVDK AKKVKFATRL RYKAVLDGGY HVFDESMYNS SDLRPSSRKL WKPAIGVLEL
0601: GILNANVFHS MKTREGKGTS DTYVVAKYGH KWVRSRTVIN SMNPKYNEQY TWEVFDPATV LTICVFDNAH FAAGDGGNKR DQPIGKVRIR LSTLQTGRVY
0701: THAYPLLVLQ PTGLKKRGEL HLAVRFTCTS VSSMLMKYTK PLLPKMHYIL PLSTNQQEAL KMQAINIIIV RLGRSEPPLR REVVDYLTDW KSQLFSMRRS
0801: KANFNRFTTV FSGALSVWKW MEQVCTWKTP VTTALVHVLY TMLVTFPEMI LPTVFLYMAV IGMWNYRFKP RFPPHMDAKL SYADNVNSDE LDEEFDTFPT
0901: VRAPDIVKMR YDRLRSVAGK VQSVAGDIAA QGERVQALLS WRDPRATAIF VTFCFIIAMA LYITPFKLVA LLSGYYFMRH PKLRHRIPSA PVNFFRRLPA
1001: MTDSML

Arabidopsis Description

C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXU9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.