CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034266.1-P	Field mustard	cytosol	85.81	70.95
CDY35342	Canola	cytosol, peroxisome, plasma membrane	56.59	68.93
CDY35343	Canola	golgi	32.26	68.21
CDX80994	Canola	cytosol	8.61	49.51
AT3G61720.1	Thale cress	cytosol	64.53	48.05
AT5G03435.1	Thale cress	cytosol	60.14	47.79
CDX71710	Canola	cytosol	59.12	45.87
CDY11377	Canola	cytosol	58.78	43.28
Solyc03g095420.1.1	Tomato	cytosol	3.55	36.84
CDY13087	Canola	cytosol	27.7	35.81
CDY57334	Canola	cytosol	25.84	34.62
CDX67712	Canola	cytosol	40.88	31.27
CDX98254	Canola	cytosol	40.88	31.27
CDY69710	Canola	cytosol	41.05	31.19
CDY68091	Canola	cytosol	38.34	29.52
CDX97214	Canola	cytosol	38.34	29.52
CDX78498	Canola	cytosol	38.18	29.39
CDX70485	Canola	cytosol	38.18	29.39
CDY47660	Canola	endoplasmic reticulum	40.88	29.23
CDX71747	Canola	cytosol	35.81	27.93
CDX98964	Canola	endoplasmic reticulum, extracellular	6.59	27.66
CDY70344	Canola	cytosol	23.31	27.38
CDX81021	Canola	cytosol	12.67	26.13
CDY42494	Canola	cytosol, plasma membrane	18.07	25.48
CDY33906	Canola	nucleus	10.14	24.9
CDY49185	Canola	cytosol	14.02	24.7
CDX81020	Canola	cytosol	16.55	24.56
CDX89108	Canola	cytosol	34.97	22.52
CDY10076	Canola	cytosol, nucleus, plasma membrane	36.99	22.46
CDY32530	Canola	cytosol	36.99	22.14
CDX86328	Canola	cytosol	37.16	21.59
CDX86768	Canola	cytosol	36.66	21.49
CDY01973	Canola	cytosol	35.64	21.29
CDY54062	Canola	cytosol	35.64	21.21
CDY48929	Canola	cytosol	35.3	21.2
CDY04800	Canola	cytosol	35.14	20.66
CDY21373	Canola	cytosol	35.3	20.61
CDX74344	Canola	cytosol	33.11	20.14
CDX91899	Canola	cytosol	33.28	20.14
CDY21171	Canola	cytosol	33.61	19.57
CDY29951	Canola	cytosol	33.61	19.49
CDX85853	Canola	cytosol	33.28	18.87
CDX68168	Canola	cytosol	33.28	18.85
CDY25472	Canola	cytosol	30.91	18.28
CDY38472	Canola	cytosol	30.91	18.25
CDX80993	Canola	extracellular	2.7	17.98
CDY13273	Canola	cytosol	11.15	14.29
HORVU2Hr1G123810.1	Barley	cytosol	1.69	4.74
HORVU7Hr1G109210.1	Barley	plastid	1.18	2.79
CDX71748	Canola	cytosol	0.34	1.1

Protein Annotations

EnsemblPlants:CDX77002	EnsemblPlantsGene:GSBRNA2T00127560001	Gene3D:2.60.40.150	GO:A0A078CJU8	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	InterPro:PRibTrfase_C	PANTHER:PTHR10024	PANTHER:PTHR10024:SF226	PFAM:PF00168
PFAM:PF08372	ProteinID:CDX77002	ProteinID:CDX77002.1	SEG:seg	SMART:SM00239	SUPFAM:SSF49562
TMHMM:TMhelix	UniParc:UPI0004EDEC36	MapMan:35.1	:	:	:

Description

BnaC04g37970D

Coordinates

chrLK031809:+:313425..316040

Molecular Weight (calculated)

67716.6 Da

IEP (calculated)

5.862

GRAVY (calculated)

-0.071

Length

592 amino acids

Sequence
(BLAST)

001: MAAKKDDFSV KKISPKLGGE RGIRNPNGPT SSHDLVEQME FLYVEWNQVF AFDKTKGDVL SVTLKDGRRE NGTVIGKQNF KVAADIPFRV PPDARIASQW
101: YSMTNMELMM SVWFGTQADE VYPRAWFSDA SDVSASCVSN TRPKLYLAPR LCHDLICNDV KRTPSVYVRA TLGDVELYTE VSLGSNPSWN QDLIFVASEP
201: LDETVYITLF DKVNGQPHDD ECIRLLEKKL SEMTAVKVPG SAPALFYDIE PPVKVEPAGD SRRFSSRIKM KLATDQAYHV FDECIQYSSD YRAFAKGLWP
301: DLLGKLEIGI LGATGLQPMK EWRDGRRSTD AYVVAKYGKK WARTRTVVGS FSPKWNEQYS WDVYDKCTTV TFGIFDNNQL AVYFSMRITN ANLERLLVVF
401: GWWYWILCLA VWPVVPVYLA VISLLEIFRL SRREFNRLVL GVDARPPPPL VPLDLKLWGL DSPDLDELAE EFDTFPSSVV DVNVLRMRYD RLRREMGENV
501: MLLLGDVASQ CERLCALLSL LDSPLAWICF SLGCYAMVVL VYVFWDHVIF FQKFLFICFV VRWVNFQCFR NDLPGGISNF FRRLPTNEGP MF

Best Arabidopsis Sequence Match ( AT3G61720.1 )
(BLAST)

001: MAANKDEFSV KQIFPKLGGE RGARNPRYGP TSSHDLVEQM EFLYVQVIQA INNSVVNPSA RICCPVVEIT LGNYKSSTKN LPMGPNMDWN QVFAFDKSKG
101: DVLSVTLKDG PTNTVINKRN FKLASEIPTR VPPDARIAPQ WYSMHNTETD FYMELLMSVW FGTQVDEVYP EAWFSDACEV CASRVINTRP KVYLAPRLCY
201: VRVTIVSGHD LISKDKNKTP SVYVTATLGK VALKTKVSSG TNPSWNQDLI FVASEPLEGT VYIRLIDRED EQHEGCIGTL KKKLTEMTPL KVPSSAPALF
301: YDIEMPTEVK PAGDSRRFAS RLKMKLATDQ AYHVAEECTQ YSSDNRAFVK GLWPGLLGKL EIGILGATGL KGSDEKKQTI DSYVVAKYGN KWARTRTVVN
401: SVSPKWNEQY SWDVYEKCTV LTLGIYDNRQ ILEDKNKAND VPIGKVRIPL NRVQSDWIYT CSYPILKLGS SGLKKMGELQ LAVRFVYVAQ GYARYSAPFR
501: WMLPKAHYKS PLSMYQIDKL RAQAVEINCA NLARTEPALR SEVVSDMLKP KSRNFSIRIS KDNFDRLYTV VKMVLWCVSV IASVRSTTAC TPKFIALGVS
601: FVFLFWEYYI YWLVTSWLVA YCIVLCIVVI LLREILKSPR QTYNWLFYRN VTPPPLILVD LKLRKLDSIN LDELAEEFDS FPSSENDLNI LRMRYDRLRK
701: IMENVMLLMG DAATQGERLL AAFTLLERPF VLIILLALCY CSMLVVCLGW DLHVRKCLIF VFICYWVQLP WFRNNLPDGS LNFFRRLPSN EDLMF

Arabidopsis Description

Ca2+dependent plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M366]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.