CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11377	Canola	cytosol	90.43	85.82
CDX77002	Canola	cytosol, peroxisome, plasma membrane	45.87	59.12
AT3G61720.1	Thale cress	cytosol	60.29	57.86
CDY35343	Canola	golgi	20.97	57.14
AT5G03435.1	Thale cress	cytosol	55.31	56.64
CDY35342	Canola	cytosol, peroxisome, plasma membrane	32.9	51.65
CDX80994	Canola	cytosol	6.16	45.63
CDY70344	Canola	cytosol	25.82	39.09
CDX67712	Canola	cytosol	37.61	37.08
CDY69710	Canola	cytosol	37.48	36.71
CDX98254	Canola	cytosol	37.22	36.69
CDX78498	Canola	cytosol	36.96	36.67
CDX81020	Canola	cytosol	19.14	36.59
CDY68091	Canola	cytosol	36.83	36.54
CDX97214	Canola	cytosol	36.83	36.54
CDX70485	Canola	cytosol	36.57	36.28
CDY13087	Canola	cytosol	21.1	35.15
CDY47660	Canola	endoplasmic reticulum	37.35	34.42
CDX71747	Canola	cytosol	33.55	33.73
CDY57334	Canola	cytosol	19.4	33.48
Solyc03g095420.1.1	Tomato	cytosol	2.49	33.33
CDY49185	Canola	cytosol	14.42	32.74
CDY42494	Canola	cytosol, plasma membrane	17.56	31.9
CDX81021	Canola	cytosol	11.93	31.71
CDX89108	Canola	cytosol	33.03	27.42
CDY10076	Canola	cytosol, nucleus, plasma membrane	34.6	27.08
CDY32530	Canola	cytosol	34.86	26.9
CDX86768	Canola	cytosol	35.52	26.83
CDY01973	Canola	cytosol	34.47	26.54
CDY54062	Canola	cytosol	34.34	26.33
CDX98964	Canola	endoplasmic reticulum, extracellular	4.85	26.24
CDX74344	Canola	cytosol	32.9	25.8
CDX91899	Canola	cytosol	33.03	25.77
CDY48929	Canola	cytosol	33.29	25.76
CDX86328	Canola	cytosol	34.34	25.71
CDY04800	Canola	cytosol	33.03	25.02
CDY21373	Canola	cytosol	33.16	24.95
CDY33906	Canola	nucleus	7.6	24.07
CDY38472	Canola	cytosol	30.8	23.43
CDY25472	Canola	cytosol	30.67	23.38
CDX85853	Canola	cytosol	31.98	23.37
CDX68168	Canola	cytosol	31.85	23.25
CDY21171	Canola	cytosol	30.67	23.01
CDY29951	Canola	cytosol	30.67	22.92
CDX80993	Canola	extracellular	2.62	22.47
CDY13273	Canola	cytosol	10.48	17.32
HORVU2Hr1G123810.1	Barley	cytosol	1.05	3.79
HORVU7Hr1G109210.1	Barley	plastid	1.05	3.19
CDX71748	Canola	cytosol	0.39	1.66

Protein Annotations

EnsemblPlants:CDX71710	EnsemblPlantsGene:GSBRNA2T00155397001	Gene3D:2.60.40.150	GO:A0A078C4F0	InterPro:C2_dom	InterPro:C2_domain_sf
InterPro:IPR000008	InterPro:IPR035892	InterPro:PRibTrfase_C	ncoils:Coil	PANTHER:PTHR10024	PANTHER:PTHR10024:SF226
PFAM:PF00168	PFAM:PF08372	PFscan:PS50004	ProteinID:CDX71710	ProteinID:CDX71710.1	SEG:seg
SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix	UniParc:UPI0004EE015A	MapMan:35.1	:

Description

BnaC08g31640D

Coordinates

chrLK031795:+:88939..91422

Molecular Weight (calculated)

86127.2 Da

IEP (calculated)

9.037

GRAVY (calculated)

-0.136

Length

763 amino acids

Sequence
(BLAST)

001: MAEFAVKKIS PKLGGERGTR NPNGPTSSHD LVEPMEFLYV EVIKTINKSV LNPITHACKP IVEITLGNYQ SSTRDLPMGP SGAWNQVFAF DKSTADVLSV
101: ALKDGQFPNN TLIGKQNFKV AADIPSRVPP DARMAPQWYP IPSTVEGYHM ELLMSVWFGT QADEVYSNAW FADASTVSAS REKNTRPKLY LAPRLCYVRV
201: TIVSGHDLIA NDRDRTPNVY VSATLDQVRL KTKPIESKNP SWNQDLIFVA SESLDGTVKI QLWDLNKDPH DQCIGTLETK LSEMTAVKVP GAASTLFYDI
301: KPGGKIQPEG DTRRFAGRLK MKLATDQSYH VFDECTQYCS DYRAFAKGLW PGTLGKLEVG ILGATGLPRA KNALKDRNAY VVAKYGNKWA RTRTVVNNKS
401: PKWNEQYSWD IYEKCTVLTL GVYDNQQIFS IDKENDAPVG KVRIPLSLLQ WNRIYTGSYP ILVLGKEGLK TTGEIQLAVR CACPPPTLTF FPPSYAFATA
501: PFRLLLPKSH YKSPISLPQI DRLRELAVGV NCQNLARTEP PLRNEVVKDM LSPKNNNFNN TPKWITFAVC FCVLWLLPPL TLWLVVYLYP YCLVSFSVYV
601: MIKVLVEYYK TRNGTGPPPP LVLFDVKLSR LEKLDDTQAL DEIAEEFDAT SAVDPQVLKM RYDRLKASGA EVMVFSGEAA SQFERFHALW MLCTSNKVVL
701: ICVLALLYPV LLVYYYFSLE SLVKAFITVF VFKWVNFTFN RLDLPSAFKN FFRRLPNKEH LMM

Best Arabidopsis Sequence Match ( AT3G61720.1 )
(BLAST)

001: MAANKDEFSV KQIFPKLGGE RGARNPRYGP TSSHDLVEQM EFLYVQVIQA INNSVVNPSA RICCPVVEIT LGNYKSSTKN LPMGPNMDWN QVFAFDKSKG
101: DVLSVTLKDG PTNTVINKRN FKLASEIPTR VPPDARIAPQ WYSMHNTETD FYMELLMSVW FGTQVDEVYP EAWFSDACEV CASRVINTRP KVYLAPRLCY
201: VRVTIVSGHD LISKDKNKTP SVYVTATLGK VALKTKVSSG TNPSWNQDLI FVASEPLEGT VYIRLIDRED EQHEGCIGTL KKKLTEMTPL KVPSSAPALF
301: YDIEMPTEVK PAGDSRRFAS RLKMKLATDQ AYHVAEECTQ YSSDNRAFVK GLWPGLLGKL EIGILGATGL KGSDEKKQTI DSYVVAKYGN KWARTRTVVN
401: SVSPKWNEQY SWDVYEKCTV LTLGIYDNRQ ILEDKNKAND VPIGKVRIPL NRVQSDWIYT CSYPILKLGS SGLKKMGELQ LAVRFVYVAQ GYARYSAPFR
501: WMLPKAHYKS PLSMYQIDKL RAQAVEINCA NLARTEPALR SEVVSDMLKP KSRNFSIRIS KDNFDRLYTV VKMVLWCVSV IASVRSTTAC TPKFIALGVS
601: FVFLFWEYYI YWLVTSWLVA YCIVLCIVVI LLREILKSPR QTYNWLFYRN VTPPPLILVD LKLRKLDSIN LDELAEEFDS FPSSENDLNI LRMRYDRLRK
701: IMENVMLLMG DAATQGERLL AAFTLLERPF VLIILLALCY CSMLVVCLGW DLHVRKCLIF VFICYWVQLP WFRNNLPDGS LNFFRRLPSN EDLMF

Arabidopsis Description

Ca2+dependent plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M366]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.