Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- endoplasmic reticulum 3
- extracellular 3
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | mitochondrion | 50.35 | 29.46 |
| CDX81020 | Canola | cytosol | 77.31 | 27.32 |
| CDY42494 | Canola | cytosol, plasma membrane | 49.65 | 16.67 |
| CDX98254 | Canola | cytosol | 59.57 | 10.85 |
| CDX97214 | Canola | cytosol | 58.87 | 10.79 |
| CDX67712 | Canola | cytosol | 58.87 | 10.72 |
| CDY69710 | Canola | cytosol | 58.87 | 10.65 |
| CDY68091 | Canola | cytosol | 57.45 | 10.53 |
| CDX78498 | Canola | cytosol | 56.74 | 10.4 |
| CDX70485 | Canola | cytosol | 56.74 | 10.4 |
| CDY47660 | Canola | endoplasmic reticulum | 58.87 | 10.02 |
| CDX71747 | Canola | cytosol | 53.9 | 10.01 |
| CDX86328 | Canola | cytosol | 59.57 | 8.24 |
| CDY35342 | Canola | cytosol, peroxisome, plasma membrane | 28.37 | 8.23 |
| CDX74344 | Canola | cytosol | 56.74 | 8.22 |
| CDX86768 | Canola | cytosol | 58.87 | 8.22 |
| CDY01973 | Canola | cytosol | 57.45 | 8.17 |
| CDX91899 | Canola | cytosol | 56.03 | 8.08 |
| CDY54062 | Canola | cytosol | 56.74 | 8.04 |
| CDY48929 | Canola | cytosol | 53.9 | 7.71 |
| CDY10076 | Canola | cytosol, nucleus, plasma membrane | 53.19 | 7.69 |
| CDY32530 | Canola | cytosol | 53.9 | 7.68 |
| CDY04800 | Canola | cytosol | 54.61 | 7.65 |
| CDX89108 | Canola | cytosol | 49.65 | 7.62 |
| CDY21373 | Canola | cytosol | 54.61 | 7.59 |
| CDX77002 | Canola | cytosol, peroxisome, plasma membrane | 27.66 | 6.59 |
| CDY38472 | Canola | cytosol | 46.81 | 6.58 |
| CDY25472 | Canola | cytosol | 46.1 | 6.49 |
| TraesCS7D01G478500.1 | Wheat | cytosol | 49.65 | 6.45 |
| CDX85853 | Canola | cytosol | 47.52 | 6.42 |
| CDX68168 | Canola | cytosol | 47.52 | 6.41 |
| Os01t0587300-00 | Rice | cytosol | 48.94 | 6.39 |
| TraesCS7A01G491900.1 | Wheat | cytosol | 48.94 | 6.37 |
| TraesCS7B01G397000.1 | Wheat | cytosol | 48.94 | 6.36 |
| CDY21171 | Canola | cytosol | 45.39 | 6.29 |
| HORVU7Hr1G110440.4 | Barley | cytosol, plastid | 48.23 | 6.28 |
| CDY29951 | Canola | cytosol | 45.39 | 6.27 |
| Zm00001d011239_P001 | Maize | cytosol, mitochondrion, plasma membrane | 46.81 | 6.09 |
| EES03181 | Sorghum | cytosol | 45.39 | 5.92 |
| CDX80994 | Canola | cytosol | 3.55 | 4.85 |
| CDX71710 | Canola | cytosol | 26.24 | 4.85 |
| CDY11377 | Canola | cytosol | 26.24 | 4.6 |
| CDY49185 | Canola | cytosol | 8.51 | 3.57 |
| CDY57334 | Canola | cytosol | 10.64 | 3.39 |
| CDY13087 | Canola | cytosol | 10.64 | 3.28 |
| CDY13273 | Canola | cytosol | 7.09 | 2.16 |
| CDX80993 | Canola | extracellular | 0.71 | 1.12 |
| CDY35343 | Canola | golgi | 2.13 | 1.07 |
| CDY33906 | Canola | nucleus | 0.71 | 0.41 |
| CDY70344 | Canola | cytosol | 1.42 | 0.4 |
| CDX81021 | Canola | cytosol | 0.71 | 0.35 |
| CDX71748 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX98964 | EnsemblPlantsGene:GSBRNA2T00107079001 | GO:A0A078EDT1 | InterPro:PRibTrfase_C | PANTHER:PTHR31425 | PANTHER:PTHR31425:SF4 |
| PFAM:PF08372 | ProteinID:CDX98964 | ProteinID:CDX98964.1 | TMHMM:TMhelix | UniParc:UPI0004EC2AB9 | MapMan:35.1 |
Description
BnaC09g48710D
Coordinates
chrLK031907:-:829810..830272
Molecular Weight (calculated)
16206.5 Da
IEP (calculated)
10.915
GRAVY (calculated)
0.290
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIIYIFLIG LWNFRFMPRH PPHMDTKISC AEAASPDELD RNLTLFRIKG TRCCRIQMVV GDIATQGERF QALLSWRVPR ATCFFVILCL VAALVLYVTP
101: FKIVALVGGM FRMRQPKFRS KMPSAPSNFF RKLPSKADMM L
101: FKIVALVGGM FRMRQPKFRS KMPSAPSNFF RKLPSKADMM L
0001: MMMSNLKLGV DVIGAHNLFP KDGQGTSNAY VELYFDGQKH RTTIKDRDLN PVWNESFFFN ISDPSRLHYL NLEAQAYSHN RSTNGRSFLG KVSLSGTSFV
0101: PHSDAVVLHF PMERRGIFSR VRGELGLKVY ITDEASLKSS AASNDHPDNL DPALPRAMNV EHRSDKRHVF YNLPNSAQEH QHQHPQGPNQ SSSLAAEQDN
0201: HNEHHHHYVP KHQVDEMRSE PARPSKLVHA HSIASAQPAD FALKETSPHL GGGRVVGGRV IHKDKTATST YDLVERMYFL YVRVVKAREL PIMDITGSVD
0301: PFVEVRVGNY KGITRHFEKR QHPEWNQVFA FAKERMQASV LEVVVKDKDL LKDDYVGFVR FDINDVPLRV PPDSPLAPQW YRLEDKKGEK IKGELMLAVW
0401: IGTQADEAFS DAWHSDAAMP VDCSPAISAV LRSKVYHAPR LWYVRVNVIE AQDLIPTDKT RFPDVYVKAQ LGNQVMKTRP CQARTLGAVW NEDFLFVVAE
0501: PFEDHLVLTV EDRVAPGKDE IVGRTYIPLN TVEKRADDHM IHARWYNLER PVIVDVDQLK REKFSMRIHL RVCLEGGYHV LDESTHYSSD LRPSARPLWR
0601: QPIGVLELGI LNAVGLHPMK TREGRGTSDT FCVGKYGQKW VRTRTMVDNL CPKYNEQYTW EVFDPATVLT VGVFDNGQLG EKGNRDVKIG KIRIRLSTLE
0701: TGRIYTHSYP LLVLHPTGVK KMGELHMAVR FTCISFANML YQYSKPLLPK MHYVRPFSVM QQDMLRHQAV NIVAARLGRA EPPLRKEIIE FMSDTDSHLW
0801: SMRKSKANFF RMMTVFSGVI AVGKWFSDIC SWRNPITTVL VHVLFLMLVC LPELILPTMF LYMFLIGLWN YRFRPRYPPH MNTKISQAEA VHPDELDEEF
0901: DTFPTTRNPD MVRLRYDRLR SVAGRIQTVI GDLATQGERF QALLSWRDPR ATAIFVILCF IAAIVFFITP IQIVVALAGF FTMRHPRFRH RLPSVPVNFF
1001: RRLPARTDSM L
0101: PHSDAVVLHF PMERRGIFSR VRGELGLKVY ITDEASLKSS AASNDHPDNL DPALPRAMNV EHRSDKRHVF YNLPNSAQEH QHQHPQGPNQ SSSLAAEQDN
0201: HNEHHHHYVP KHQVDEMRSE PARPSKLVHA HSIASAQPAD FALKETSPHL GGGRVVGGRV IHKDKTATST YDLVERMYFL YVRVVKAREL PIMDITGSVD
0301: PFVEVRVGNY KGITRHFEKR QHPEWNQVFA FAKERMQASV LEVVVKDKDL LKDDYVGFVR FDINDVPLRV PPDSPLAPQW YRLEDKKGEK IKGELMLAVW
0401: IGTQADEAFS DAWHSDAAMP VDCSPAISAV LRSKVYHAPR LWYVRVNVIE AQDLIPTDKT RFPDVYVKAQ LGNQVMKTRP CQARTLGAVW NEDFLFVVAE
0501: PFEDHLVLTV EDRVAPGKDE IVGRTYIPLN TVEKRADDHM IHARWYNLER PVIVDVDQLK REKFSMRIHL RVCLEGGYHV LDESTHYSSD LRPSARPLWR
0601: QPIGVLELGI LNAVGLHPMK TREGRGTSDT FCVGKYGQKW VRTRTMVDNL CPKYNEQYTW EVFDPATVLT VGVFDNGQLG EKGNRDVKIG KIRIRLSTLE
0701: TGRIYTHSYP LLVLHPTGVK KMGELHMAVR FTCISFANML YQYSKPLLPK MHYVRPFSVM QQDMLRHQAV NIVAARLGRA EPPLRKEIIE FMSDTDSHLW
0801: SMRKSKANFF RMMTVFSGVI AVGKWFSDIC SWRNPITTVL VHVLFLMLVC LPELILPTMF LYMFLIGLWN YRFRPRYPPH MNTKISQAEA VHPDELDEEF
0901: DTFPTTRNPD MVRLRYDRLR SVAGRIQTVI GDLATQGERF QALLSWRDPR ATAIFVILCF IAAIVFFITP IQIVVALAGF FTMRHPRFRH RLPSVPVNFF
1001: RRLPARTDSM L
Arabidopsis Description
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q84TJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.