CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13087	Canola	cytosol	93.89	90.61
AT5G44760.1	Thale cress	cytosol	77.6	71.76
Bra027570.1-P	Field mustard	cytosol	90.27	52.5
CDY49185	Canola	cytosol	39.82	52.38
CDX81021	Canola	cytosol	23.08	35.54
CDY70344	Canola	cytosol	37.33	32.74
CDX80994	Canola	cytosol	7.47	32.04
CDX67712	Canola	cytosol	53.39	30.49
CDX98254	Canola	cytosol	52.71	30.1
CDY69710	Canola	cytosol	52.94	30.04
CDX70485	Canola	cytosol	51.81	29.78
CDX78498	Canola	cytosol	51.81	29.78
CDX97214	Canola	cytosol	51.58	29.65
CDY68091	Canola	cytosol	51.36	29.52
Zm00001d046749_P001	Maize	mitochondrion	51.13	29.16
Zm00001d036801_P001	Maize	plasma membrane	50.68	28.94
EER90047	Sorghum	cytosol	50.45	28.77
Os05t0370600-01	Rice	plastid	50.23	28.68
HORVU5Hr1G073350.1	Barley	cytosol	49.77	28.42
TraesCS5D01G273300.1	Wheat	cytosol	49.77	28.42
TraesCS5A01G265400.1	Wheat	cytosol	49.77	28.42
TraesCS5B01G265100.1	Wheat	cytosol	49.77	28.42
CDY47660	Canola	endoplasmic reticulum	52.94	28.26
TraesCS5D01G178600.1	Wheat	cytosol	48.87	28.02
TraesCS5B01G171600.1	Wheat	cytosol	48.64	27.89
HORVU5Hr1G053320.2	Barley	cytosol	48.42	27.76
Solyc01g086700.2.1	Tomato	cytosol	49.55	27.38
VIT_13s0064g01400.t01	Wine grape	cytosol	48.87	27.27
TraesCS5A01G174100.1	Wheat	cytosol	47.06	27.26
PGSC0003DMT400087204	Potato	cytosol	49.55	26.97
KRH48448	Soybean	cytosol	42.76	26.69
KRH39245	Soybean	cytosol	44.8	26.4
KRH43466	Soybean	plasma membrane	13.35	26.22
CDX77002	Canola	cytosol, peroxisome, plasma membrane	34.62	25.84
CDX71747	Canola	cytosol	44.34	25.82
CDY35343	Canola	golgi	14.93	23.57
KRH15602	Soybean	plasma membrane	38.69	22.06
CDX86768	Canola	cytosol	49.32	21.58
CDY01973	Canola	cytosol	46.38	20.69
CDX89108	Canola	cytosol	42.99	20.67
CDY54062	Canola	cytosol	46.38	20.6
CDY10076	Canola	cytosol, nucleus, plasma membrane	45.02	20.41
CDY04800	Canola	cytosol	46.38	20.36
CDY21373	Canola	cytosol	46.61	20.32
CDY13273	Canola	cytosol	21.04	20.13
CDX86328	Canola	cytosol	46.38	20.12
CDY32530	Canola	cytosol	44.8	20.02
CDY48929	Canola	cytosol	44.34	19.88
CDY11377	Canola	cytosol	35.97	19.78
CDX74344	Canola	cytosol	43.44	19.73
CDX91899	Canola	cytosol	43.21	19.53
CDX71710	Canola	cytosol	33.48	19.4
CDY42494	Canola	cytosol, plasma membrane	18.33	19.29
CDY35342	Canola	cytosol, peroxisome, plasma membrane	21.04	19.14
CDY33906	Canola	nucleus	10.41	19.09
CDX81020	Canola	cytosol	17.19	19.05
CDX80993	Canola	extracellular	3.62	17.98
CDY21171	Canola	cytosol	41.18	17.9
CDY29951	Canola	cytosol	41.18	17.83
CDX68168	Canola	cytosol	40.72	17.22
CDX85853	Canola	cytosol	40.5	17.15
CDY25472	Canola	cytosol	37.1	16.38
CDY38472	Canola	cytosol	37.1	16.35
CDX98964	Canola	endoplasmic reticulum, extracellular	3.39	10.64
CDX71748	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY57334	EnsemblPlantsGene:GSBRNA2T00020853001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	InterPro:PRibTrfase_C	PANTHER:PTHR10024	PANTHER:PTHR10024:SF226	PFAM:PF00168	PFAM:PF08372
ProteinID:CDY57334	ProteinID:CDY57334.1	SEG:seg	SMART:SM00239	SUPFAM:SSF49562	UniParc:UPI0004EEC2CC
UniProt:A0A078J3Y8	MapMan:35.1	:	:	:	:

Description

BnaC09g51830DBnaC09g51830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J3Y8]

Coordinates

chrLK033565:+:1133..3349

Molecular Weight (calculated)

49925.9 Da

IEP (calculated)

5.002

GRAVY (calculated)

-0.424

Length

442 amino acids

Sequence
(BLAST)

001: MAENDFSLKE TCPKIGGGRS FPGGEMQTSS FDLVERMTFL YIRVVKARAL PSNDSFIEVT IGSYKGRTKN NTNPNPNPEF HEVFAFNKDR LQGNVLDVAV
101: KANEEVIIGK CKFEVAEIPT RVPPDSPLAP QWYRLEDING NRFGGEVMLS VWMGTQADEV FPEAWHSDCV TNQSGDFSER VFREHCREES GVSDTNHEPG
201: LERGYDLGQN EECLGKCEIK LSQVERRVMP DPVPAMWYNL ERVVDSVVPG FAGRIHLRVS LEGGYHVLDE SIQYSSDYRA SAKILWTPAI GVLELGVISA
301: SGLMPMKSRD GRGTTDAYCV AKYGQKWVRT RTIPPLRRDV VEYMLDFGSN IWSIRRGRAN FERLVTFFTA FLDAWVWFDS VCKWKSPLSK ADSALPDELD
401: EEFDGFPSGK SADLVKKRYD SNLLNLHETA DDFACLLRHE TP

Best Arabidopsis Sequence Match ( AT5G44760.1 )
(BLAST)

001: MAEHDFSLKE TCPKIGGRRS IPGGDMLTSS FDLVERMTFL YIRIVKARAL PSNDLFVEVT IGRYKGRTKR STNPYPNLEF DEVFAFNSDR LQGNMLEVTM
101: KMNEEEIIGQ CRFEVAEIPT RIPPDSPLAP QWDRLEDRNA NRFGEEVMVS VWMGTQADEV CPEAWHSDSA TVTGENAVIV RSKVYLSPRL WYLRVNVIEA
201: QVLVLLQGNR TNPEVLVKGF VGNVVVRSRV SQSRTMSPVL ERGYDVGQKE ECLGLCEIKL SQVERRVLPG PVPALWYNLE RVGDSGFAGR IHLRVSLDGG
301: YHVLDESIQY SSDYRASAKL LWTPTIGVLV LGVISASGSI PMKSRDGRGT TDAYCVAKYG QKWLGRSEPP LGRDVIEYML DFGSNIWCLR RGRAHFERIV
401: SFFTTFIDSW IWFDSVCKWK SPLSKADSAL PDELDEEFDG FPSARSADLV RNSGLWSNLL SLHETANDFA CVLRHETP

Arabidopsis Description

C2 domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FIZ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.