CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 1
golgi 5
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77002	Canola	cytosol, peroxisome, plasma membrane	68.21	32.26
Bra034266.1-P	Field mustard	cytosol	73.57	28.77
CDX81021	Canola	cytosol	26.07	25.44
AT5G03435.1	Thale cress	cytosol	58.93	22.15
CDX71710	Canola	cytosol	57.14	20.97
AT3G61720.1	Thale cress	cytosol	58.93	20.75
CDY33906	Canola	nucleus	17.86	20.75
CDY11377	Canola	cytosol	55.71	19.4
CDX80993	Canola	extracellular	6.07	19.1
CDY13273	Canola	cytosol	29.29	17.75
CDY13087	Canola	cytosol	28.21	17.25
CDY57334	Canola	cytosol	23.57	14.93
CDY70344	Canola	cytosol	26.07	14.48
CDY69710	Canola	cytosol	36.79	13.22
CDX67712	Canola	cytosol	36.43	13.18
CDX98254	Canola	cytosol	36.43	13.18
CDX70485	Canola	cytosol	34.64	12.61
CDX97214	Canola	cytosol	34.29	12.48
CDY68091	Canola	cytosol	34.29	12.48
CDX78498	Canola	cytosol	34.29	12.48
CDY47660	Canola	endoplasmic reticulum	36.79	12.44
CDX71747	Canola	cytosol	31.79	11.73
CDX86768	Canola	cytosol	40.71	11.29
CDX89108	Canola	cytosol	36.43	11.1
CDY01973	Canola	cytosol	38.57	10.9
CDY10076	Canola	cytosol, nucleus, plasma membrane	37.86	10.87
CDY54062	Canola	cytosol	38.57	10.85
CDX74344	Canola	cytosol	37.5	10.79
CDX91899	Canola	cytosol	37.5	10.74
CDY32530	Canola	cytosol	37.86	10.72
CDY48929	Canola	cytosol	37.5	10.65
CDX71748	Canola	cytosol	6.43	9.94
CDX86328	Canola	cytosol	35.71	9.81
CDY04800	Canola	cytosol	35.0	9.73
CDY21373	Canola	cytosol	35.0	9.66
CDY21171	Canola	cytosol	34.29	9.44
CDY29951	Canola	cytosol	34.29	9.4
HORVU2Hr1G123810.1	Barley	cytosol	6.79	9.0
CDX85853	Canola	cytosol	32.86	8.81
CDX68168	Canola	cytosol	32.86	8.8
CDY49185	Canola	cytosol	10.36	8.63
CDY25472	Canola	cytosol	29.64	8.29
CDY38472	Canola	cytosol	29.64	8.28
HORVU7Hr1G109210.1	Barley	plastid	4.29	4.78
CDX98964	Canola	endoplasmic reticulum, extracellular	1.07	2.13
Solyc03g095420.1.1	Tomato	cytosol	0.36	1.75
CDX81020	Canola	cytosol	0.71	0.5
CDY42494	Canola	cytosol, plasma membrane	0.71	0.48
CDY35342	Canola	cytosol, peroxisome, plasma membrane	0.71	0.41
CDX80994	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY35343	EnsemblPlantsGene:GSBRNA2T00058315001	Gene3D:2.60.40.150	InterPro:C2_dom	InterPro:C2_domain_sf	InterPro:IPR000008
InterPro:IPR035892	PANTHER:PTHR10024	PANTHER:PTHR10024:SF226	PFAM:PF00168	ProteinID:CDY35343	ProteinID:CDY35343.1
SUPFAM:SSF49562	UniParc:UPI0004EEB238	UniProt:A0A078HEW7	MapMan:35.1	:	:

Description

BnaA04g15040DBnaA04g15040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HEW7]

Coordinates

chrLK032350:-:211883..213021

Molecular Weight (calculated)

32143.8 Da

IEP (calculated)

9.381

GRAVY (calculated)

-0.150

Length

280 amino acids

Sequence
(BLAST)

001: MGLKVNSFVF LVCFISKRNL MEKSGPLNVN RYRMYHIQYY ILIFNYTRNN MFLSFLPKRI TLFLFRNDFS VKKISPKLGG ERGIRNPKGP TSSHDLVEQM
101: EFLYVEWNQV FAFDKTKGDV LSVTLKDGRR ENGTVIGKQN FKVAADIPFR VPPDARIAPL WYSMGNMELM TSVWFGTQAD EVYPRAWFAD ASDVSASCVR
201: NTRPKLYLAP RLCYVRVTIV SGHDLICNDA ERTPSVYVRA TLGVVELYTE VSLGSNPSWN QDLIFVASEP LEETVYNPIR

Best Arabidopsis Sequence Match ( AT3G57880.2 )
(BLAST)

001: MQRPPPEDFS LKETRPHLGG GKLSGDKLTS TYDLVEQMQY LYVRVVKAKE LPGKDMTGSC DPYVEVKLGN YKGTTRHFEK KSNPEWNQVF AFSKDRIQAS
101: FLEATVKDKD FVKDDLIGRV VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT VSGTDALANI RSKVYLSPKL
201: WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV
301: NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR
401: TRTIIDSFTP RWNEQYTWEV FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG VKKMGEIHLA VRFTCSSLLN
501: MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT RAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT
601: VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE
701: RLQSLLSWRD PRATALFVLF CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML

Arabidopsis Description

Anthranilate phosphoribosyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2R0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.