CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034266.1-P	Field mustard	cytosol	86.21	58.52
CDX77002	Canola	cytosol, peroxisome, plasma membrane	68.93	56.59
CDX80994	Canola	cytosol	10.49	49.51
CDX81020	Canola	cytosol	31.69	38.6
CDY42494	Canola	cytosol, plasma membrane	32.51	37.62
AT3G61720.1	Thale cress	cytosol	57.61	35.22
Solyc03g095420.1.1	Tomato	cytosol	4.12	35.09
AT5G03435.1	Thale cress	cytosol	51.23	33.42
CDX71710	Canola	cytosol	51.65	32.9
CDY11377	Canola	cytosol	52.26	31.59
CDX98964	Canola	endoplasmic reticulum, extracellular	8.23	28.37
CDX98254	Canola	cytosol	39.51	24.81
CDX67712	Canola	cytosol	39.3	24.68
CDY69710	Canola	cytosol	39.51	24.65
CDX78498	Canola	cytosol	38.68	24.45
CDY68091	Canola	cytosol	38.68	24.45
CDY49185	Canola	cytosol	16.87	24.4
CDY70344	Canola	cytosol	25.31	24.4
CDX97214	Canola	cytosol	38.48	24.32
CDX70485	Canola	cytosol	38.48	24.32
CDY47660	Canola	endoplasmic reticulum	39.3	23.07
CDX71747	Canola	cytosol	35.19	22.53
CDY57334	Canola	cytosol	19.14	21.04
CDY13087	Canola	cytosol	19.14	20.31
CDY10076	Canola	cytosol, nucleus, plasma membrane	38.89	19.38
CDY32530	Canola	cytosol	39.09	19.21
CDX89108	Canola	cytosol	35.8	18.93
CDX86328	Canola	cytosol	37.65	17.96
CDY04800	Canola	cytosol	37.04	17.87
CDY21373	Canola	cytosol	37.24	17.85
CDY54062	Canola	cytosol	35.8	17.49
CDY01973	Canola	cytosol	35.6	17.46
CDY48929	Canola	cytosol	34.98	17.24
CDX86768	Canola	cytosol	35.8	17.23
CDX74344	Canola	cytosol	33.74	16.86
CDY21171	Canola	cytosol	34.98	16.72
CDX91899	Canola	cytosol	33.54	16.67
CDX68168	Canola	cytosol	35.8	16.65
CDY29951	Canola	cytosol	34.98	16.65
CDX85853	Canola	cytosol	35.6	16.57
CDY38472	Canola	cytosol	32.92	15.95
CDY25472	Canola	cytosol	32.72	15.88
CDY33906	Canola	nucleus	1.85	3.73
CDX81021	Canola	cytosol	1.85	3.14
HORVU2Hr1G123810.1	Barley	cytosol	0.62	1.42
CDX80993	Canola	extracellular	0.21	1.12
HORVU7Hr1G109210.1	Barley	plastid	0.41	0.8
CDY35343	Canola	golgi	0.41	0.71
CDY13273	Canola	cytosol	0.62	0.65
CDX71748	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.1	GO:A0A078HC29	UniProt:A0A078HC29	InterPro:C2_dom	InterPro:C2_domain_sf
EnsemblPlants:CDY35342	ProteinID:CDY35342	ProteinID:CDY35342.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:GSBRNA2T00058314001	InterPro:IPR000008	InterPro:IPR035892	PFAM:PF00168	PFAM:PF08372	InterPro:PRibTrfase_C
PFscan:PS50004	PANTHER:PTHR10024	PANTHER:PTHR10024:SF226	SMART:SM00239	SUPFAM:SSF49562	TMHMM:TMhelix
UniParc:UPI0004EDB56C	SEG:seg	:	:	:	:

Description

BnaA04g15050DBnaA04g15050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HC29]

Coordinates

chrLK032350:-:210288..211821

Molecular Weight (calculated)

56100.4 Da

IEP (calculated)

8.408

GRAVY (calculated)

0.038

Length

486 amino acids

Sequence
(BLAST)

001: MNAVKVPGSA PALFYDIEPP VNLEQAGDSR RFSSRIKMKL ATDQAYHVLD ECIQYSSDYR AFAKGLWPDL LGKLEIGILG ATGLQPMKEW RDGRRSTDAY
101: VVAKYGNKWA RTRTVVGSFS PKWNEQYSWD VYDKCTTVTF GIFDNNQLAV VSSNTNLDGL IGKVRIPLTS LEWDRVYTCS CPILVLREDG LKKTGELQLV
201: VRCLCVANAY VRATSPFRWM LPKAHYKSPM SMVQTEDLRW QAIRLNCLNL ARAEPPLRNE VVLDMLRPTN KSFSMRITNA NLERLRRAAR MLVVFGWWYW
301: ILCLAVWPVV PVYLAVISLR EIFRLGRLEF NRLVLGVETH PPPLVPLDLK LWGLDSPDLD ELAEEFDTFS SSMVDVNVLR MRYDRLRREM GENVMLLLGD
401: VASQCERFCA LLSLLDSPLN WICFSLVCYA VVVFVYMFWD HVIFFQKFVF ICFVVRWVNF QCFRNDLPSG ISNFFRRLPT NEGPMF

Best Arabidopsis Sequence Match ( AT3G61720.1 )
(BLAST)

001: MAANKDEFSV KQIFPKLGGE RGARNPRYGP TSSHDLVEQM EFLYVQVIQA INNSVVNPSA RICCPVVEIT LGNYKSSTKN LPMGPNMDWN QVFAFDKSKG
101: DVLSVTLKDG PTNTVINKRN FKLASEIPTR VPPDARIAPQ WYSMHNTETD FYMELLMSVW FGTQVDEVYP EAWFSDACEV CASRVINTRP KVYLAPRLCY
201: VRVTIVSGHD LISKDKNKTP SVYVTATLGK VALKTKVSSG TNPSWNQDLI FVASEPLEGT VYIRLIDRED EQHEGCIGTL KKKLTEMTPL KVPSSAPALF
301: YDIEMPTEVK PAGDSRRFAS RLKMKLATDQ AYHVAEECTQ YSSDNRAFVK GLWPGLLGKL EIGILGATGL KGSDEKKQTI DSYVVAKYGN KWARTRTVVN
401: SVSPKWNEQY SWDVYEKCTV LTLGIYDNRQ ILEDKNKAND VPIGKVRIPL NRVQSDWIYT CSYPILKLGS SGLKKMGELQ LAVRFVYVAQ GYARYSAPFR
501: WMLPKAHYKS PLSMYQIDKL RAQAVEINCA NLARTEPALR SEVVSDMLKP KSRNFSIRIS KDNFDRLYTV VKMVLWCVSV IASVRSTTAC TPKFIALGVS
601: FVFLFWEYYI YWLVTSWLVA YCIVLCIVVI LLREILKSPR QTYNWLFYRN VTPPPLILVD LKLRKLDSIN LDELAEEFDS FPSSENDLNI LRMRYDRLRK
701: IMENVMLLMG DAATQGERLL AAFTLLERPF VLIILLALCY CSMLVVCLGW DLHVRKCLIF VFICYWVQLP WFRNNLPDGS LNFFRRLPSN EDLMF

Arabidopsis Description

Ca2+dependent plant phosphoribosyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9M366]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.